CN186080

Overview
NameCN186080
Unique NameCN186080
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length708
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_BACCQ (Anthranilate phosphoribosyltransferase OS=Bacillus cereus (strain Q1) GN=trpD PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 9.450e-26
Identity = 73/178 (41.01%), Postives = 99/178 (55.62%), Query Frame = 2
Query:  179 NELIDCLISRVDLTEAEAQASLDYLLNEAD-EALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEG-LGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            N  +  L+    LTE E   +   LLNE   E+ I+AFLVLL+AKGET  EI GL RA+ + A      +  A+D  GTGGDGA T NIST ++ + A    KVAK             D+LE LGV I   P  +   ++  GI F+ +   HPA+K +  +RK+L V T+FN++GP
Sbjct:    2 NNYLRKLVEGQHLTEEEMYKAGLLLLNENILESEIAAFLVLLKAKGETAEEIYGLVRALREKALPFSNHIQGAMDNCGTGGDGAQTFNISTTSAFVLAGADVKVAKHGNRAVSSKTGSADLLEELGVNISSTPNEIDYLLEHVGIAFLFAPAMHPALKRIMKIRKELNVPTIFNLIGP 179          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_BACC7 (Anthranilate phosphoribosyltransferase OS=Bacillus cereus (strain AH187) GN=trpD PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 9.450e-26
Identity = 73/178 (41.01%), Postives = 99/178 (55.62%), Query Frame = 2
Query:  179 NELIDCLISRVDLTEAEAQASLDYLLNEAD-EALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEG-LGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            N  +  L+    LTE E   +   LLNE   E+ I+AFLVLL+AKGET  EI GL RA+ + A      +  A+D  GTGGDGA T NIST ++ + A    KVAK             D+LE LGV I   P  +   ++  GI F+ +   HPA+K +  +RK+L V T+FN++GP
Sbjct:    2 NNYLRKLVEGQHLTEEEMYKAGLLLLNENILESEIAAFLVLLKAKGETAEEIYGLVRALREKALPFSNHIQGAMDNCGTGGDGAQTFNISTTSAFVLAGADVKVAKHGNRAVSSKTGSADLLEELGVNISSTPNEIDYLLEHVGIAFLFAPAMHPALKRIMKIRKELNVPTIFNLIGP 179          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_BACC4 (Anthranilate phosphoribosyltransferase OS=Bacillus cereus (strain B4264) GN=trpD PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 9.450e-26
Identity = 72/178 (40.45%), Postives = 99/178 (55.62%), Query Frame = 2
Query:  179 NELIDCLISRVDLTEAEA-QASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEG-LGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            N  +  L+    LTE E  +A L  L     E+ I+AFLVLL+AKGET  EI GL RA+ + A      +  A+D  GTGGDGA T NIST ++ + A  G KVAK             D+LE LGV I   P  +   ++  GI F+ +   HPA++ +  +RK+L V T+FN++GP
Sbjct:    2 NNYLRKLVEGQHLTEEEMYKAGLLLLSENILESEIAAFLVLLKAKGETAEEIYGLVRALREKALPFSNHIQGAMDNCGTGGDGAQTFNISTTSAFVLAGAGVKVAKHGNRAVSSKTGSADLLEELGVNISSTPNEIDYLLEHVGIAFLFAPVMHPALRRIMKIRKELNVPTIFNLIGP 179          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_BACC3 (Anthranilate phosphoribosyltransferase OS=Bacillus cereus (strain 03BB102) GN=trpD PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 9.450e-26
Identity = 73/178 (41.01%), Postives = 99/178 (55.62%), Query Frame = 2
Query:  179 NELIDCLISRVDLTEAEAQASLDYLLNEAD-EALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEG-LGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            N  +  L+    LTE E   +   LLNE   E+ I+AFLVLL+AKGET  EI GL RA+ + A      +  A+D  GTGGDGA T NIST ++ + A    KVAK             D+LE LGV I   P  +   ++  GI F+ +   HPA+K +  +RK+L V T+FN++GP
Sbjct:    2 NNYLRKLVEGQHLTEEEMYKAGLLLLNENILESEIAAFLVLLKAKGETAEEIYGLVRALREKALPFSNHIQGAMDNCGTGGDGAQTFNISTTSAFVLAGADVKVAKHGNRAVSSKTGSADLLEELGVNISSTPNEIDYLLEHVGIAFLFAPAMHPALKRIMKIRKELNVPTIFNLIGP 179          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_SILPO (Anthranilate phosphoribosyltransferase OS=Silicibacter pomeroyi GN=trpD PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.234e-25
Identity = 66/165 (40.00%), Postives = 90/165 (54.55%), Query Frame = 2
Query:  215 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            LT AEA+ +   L + EA  + I   L+ LR +GET  E    A  M      V     A+DIVGTGGDG NT+NIST  + + A  G  VAK             D+   +G+ + + P+ V + ++EAGIGFMM+  +HPA   V P R +L  +T+FNILGP
Sbjct:   17 LTRAEAEQAFTILFDGEATPSQIGGLLMALRTRGETVDEYAAAAAVMRAKCNAVRAPEGAMDIVGTGGDGKNTLNISTATAFVVAGAGVVVAKHGNRNLSSKSGTADLQGQMGINVMVGPQVVEKALNEAGIGFMMAPMHHPATAHVMPTRAELGTRTIFNILGP 181          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_SHEB9 (Anthranilate phosphoribosyltransferase OS=Shewanella baltica (strain OS195) GN=trpD PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.234e-25
Identity = 75/196 (38.27%), Postives = 102/196 (52.04%), Query Frame = 2
Query:  149 IDTRPQTPCFNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDA---------VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            + T P  P    L+D L     L+  +       L+  E  EA ++  LV L+ +GET  EI G A AM + AAK     +          VDIVGTGGDG NT+NIST A+ +AAA GAKVAK             D+L   G+ + + PE   RC+D   + F+ +  YH  +K   PVR+ LK +T+FN+LGP
Sbjct:    1 MSTNPIQP----LLDVLYQGKSLSREQTAELFSALIRGEMSEAAMAGMLVALKMRGETIDEISGAADAM-RAAAKPFPCPERNNNPLHNGIVDIVGTGGDGFNTINISTTAAFVAAAAGAKVAKHGNRSVSSKSGSSDLLAQFGIDLTMSPETASRCLDALNLCFLFAPHYHGGVKHAVPVRQALKTRTLFNVLGP 191          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_PELCD (Anthranilate phosphoribosyltransferase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=trpD PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.234e-25
Identity = 67/166 (40.36%), Postives = 88/166 (53.01%), Query Frame = 2
Query:  260 EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKV-----------------EGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            EA  A I A +V LR KGET  EI G AR M  +A  V                 E +   +D  GTGG G  + NIST  + + AACG KVAK             DVLEALGV +D+  + V RC+ E GIGF+ +   H AM++    R+++ ++T+FNILGP
Sbjct:   31 EATPAQIGALIVALRMKGETVEEITGAARVMRDHATPVRVGRVLDIDREEINLDQETMAAVLDTCGTGGSGTKSFNISTTVAFVVAACGVKVAKHGNRSVSSMCGSADVLEALGVHLDIGVDTVERCIAEEGIGFLFAPALHGAMRYAIGPRREIGIRTIFNILGP 196          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_METPE (Anthranilate phosphoribosyltransferase OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=trpD PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.234e-25
Identity = 69/179 (38.55%), Postives = 100/179 (55.87%), Query Frame = 2
Query:  182 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVE---GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            E +  +I+  DL E  A  +++ ++   A  A I +FL  LR KGE+  E+   A  M  +A + +   G G  VD  GTGGD A T NIST A+I+AA  G ++ K             DVLE LGV + + P   +  +++AGI F+ +  +HPAMK V   RK++ ++TVFNILGP
Sbjct:    4 EALARVIAGQDLPEQMAAGAMEAIMTGAATNAQIGSFLTALRMKGESPAEVAAFAAVMRVHAVQFQVRGGQGRLVDTCGTGGDQAGTFNISTAAAIVAAGAGVRIVKHGNRSASGRCGSADVLEELGVNLAMTPAQEQATLEQAGIVFLFAQTHHPAMKHVAAARKEIGIRTVFNILGP 182          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_CHLPB (Anthranilate phosphoribosyltransferase OS=Chlorobium phaeobacteroides (strain BS1) GN=trpD PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.234e-25
Identity = 70/178 (39.33%), Postives = 98/178 (55.06%), Query Frame = 2
Query:  176 FNELIDCLISRVDLTEAEAQASLD-YLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            + EL+  L++  DL+  E +      +L E  +++I+A L LL+ KG T  E+ G   A+I  A  V+   +AVD  GTGGD A T NIST A+I+A   G  +AK             DVLE LG  I L P+       E G  F+ +  YHPAMK V  +R++L +KT+FN+LGP
Sbjct:    3 YKELLHKLLTGTDLSGKEMEECFSGIMLGEYPDSVIAAILALLQKKGVTPEEVAGAYFAIISKALPVQLGDNAVDTCGTGGDQAGTFNISTVAAIIANGAGVPIAKHGNRSVTSRCGSADVLEQLGYRILLPPDKTEMLFRETGFAFLFAPLYHPAMKAVAHIRRELGIKTIFNMLGP 180          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_BACCZ (Anthranilate phosphoribosyltransferase OS=Bacillus cereus (strain ZK / E33L) GN=trpD PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.234e-25
Identity = 73/178 (41.01%), Postives = 99/178 (55.62%), Query Frame = 2
Query:  179 NELIDCLISRVDLTEAEAQASLDYLLNEAD-EALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEG-LGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            N  +  L+    LTE E   +   LLNE   E+ I+AFLVLL+AKGET  EI GL RA+ + A      +  A+D  GTGGDGA T NIST ++ + A    KVAK             D+LE LGV I   P  +   ++  GI F+ +   HPA+K +  +RK+L V T+FN++GP
Sbjct:    2 NNYLRKLVEGQHLTEEEMYKAGLLLLNENILESEIAAFLVLLKAKGETAEEIYGLVRALREKALPFSNHIQGAMDNCGTGGDGAQTFNISTTSAFVLAGADVKVAKHGNRAVSSKTGSADLLEELGVNISSTPNEIDYLLEHVGIAFLFAPVMHPALKRIMKIRKELNVPTIFNLIGP 179          
The following BLAST results are available for this feature:
BLAST of CN186080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_BACCQ9.450e-2641.01Anthranilate phosphoribosyltransferase OS=Bacillus... [more]
TRPD_BACC79.450e-2641.01Anthranilate phosphoribosyltransferase OS=Bacillus... [more]
TRPD_BACC49.450e-2640.45Anthranilate phosphoribosyltransferase OS=Bacillus... [more]
TRPD_BACC39.450e-2641.01Anthranilate phosphoribosyltransferase OS=Bacillus... [more]
TRPD_SILPO1.234e-2540.00Anthranilate phosphoribosyltransferase OS=Siliciba... [more]
TRPD_SHEB91.234e-2538.27Anthranilate phosphoribosyltransferase OS=Shewanel... [more]
TRPD_PELCD1.234e-2540.36Anthranilate phosphoribosyltransferase OS=Pelobact... [more]
TRPD_METPE1.234e-2538.55Anthranilate phosphoribosyltransferase OS=Methanos... [more]
TRPD_CHLPB1.234e-2539.33Anthranilate phosphoribosyltransferase OS=Chlorobi... [more]
TRPD_BACCZ1.234e-2541.01Anthranilate phosphoribosyltransferase OS=Bacillus... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS05_0002F09_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186080 ID=CN186080; Name=CN186080; organism=Citrus sinensis; type=EST; length=708bp
AGGGTTTCTTCCTCTCCATTTAATAATAATCACCCAAACCACCGGCCTTT
CTTACCGTCGCTTGGGAACTGTGGATTTACGACTGCGGGTAATAATCCGA
GATGCAGAGAATTAACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGAT
AGATACTCGTCCTCAAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGA
TAAGTCGAGTGGATTTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTAC
TTGTTGAATGAAGCTGATGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCT
CAGAGCCAAAGGAGAAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGA
TGATAAAGTATGCTGCGAAGGTGGAAGGGCTGGGTGATGCAGTTGACATT
GTGGGTACAGGAGGTGATGGTGCAAACACAGTGAACATTTCAACTGGTGC
TTCAATTCTTGCCGCAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTC
GGTCTAGTTCTTCTGCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGT
GTCGTTATTGACTTGGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGC
AGGAATTGGTTTCATGATGTCGACAAAGTATCACCCTGCAATGAAGTTTG
TCAGGCCAGTGAGGAAAAAGCTCAAAGTAAAAACTGTATTCAATATATTG
GGTCCTAT
back to top