CN186080

Overview
NameCN186080
Unique NameCN186080
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length708
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_SHEB8 (Anthranilate phosphoribosyltransferase OS=Shewanella baltica (strain OS185) GN=trpD PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.105e-25
Identity = 75/196 (38.27%), Postives = 101/196 (51.53%), Query Frame = 2
Query:  149 IDTRPQTPCFNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDA---------VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            + T P  P    L+D L     L   +       L+  E  EA ++  LV L+ +GET  EI G A AM + AAK     +          VDIVGTGGDG NT+NIST A+ +AAA GAKVAK             D+L   G+ + + PE   RC+D   + F+ +  YH  +K   PVR+ LK +T+FN+LGP
Sbjct:    1 MSTNPIQP----LLDVLYQGKSLNREQTAELFGALIRGEMSEAAMAGMLVALKMRGETIDEISGAADAM-RAAAKPFPCPERNNNPLHNGIVDIVGTGGDGFNTINISTTAAFVAAAAGAKVAKHGNRSVSSKSGSSDLLAQFGIDLTMSPETASRCLDALNLCFLFAPHYHGGVKHAVPVRQALKTRTLFNVLGP 191          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_PSEHT (Anthranilate phosphoribosyltransferase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=trpD PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.105e-25
Identity = 64/175 (36.57%), Postives = 100/175 (57.14%), Query Frame = 2
Query:  188 IDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAV-DIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            I+ LIS   L+  +++A  D ++     +  +SA L+ L++KGE   EI G A +M + A       + + D  GTGGDG+NT+NIST A+I+AAA G  + K             D+L+ALG+ I++ P     C+++ G  F+ + +YHP ++    VR  LK +T+FNILGP
Sbjct:   25 IEQLISNQSLSYTQSKALFDEIMQGNMSDIELSALLIALKSKGEISDEIAGAAASMRENALAFNTTRNQLADCCGTGGDGSNTINISTTAAIVAAAAGINMVKHGNRSVSSNSGSADLLKALGINIEMTPAQAANCLEQTGFTFLFAPQYHPGVRHAMGVRTALKTRTIFNILGP 199          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_DINSH (Anthranilate phosphoribosyltransferase OS=Dinoroseobacter shibae (strain DFL 12) GN=trpD PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.105e-25
Identity = 65/165 (39.39%), Postives = 88/165 (53.33%), Query Frame = 2
Query:  215 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            LT AEA+A+ + L   EA  + +   L+ LR +GET  E    A  M      V     A+DIVGTGGDG  T+NIST  + + A  G  VAK             D L  +G+ + + P  V R + E GI FMM+  +HPA++ V P R +L  +T+FNILGP
Sbjct:   17 LTRAEAEAAFEILFEGEATPSQMGGLLMALRTRGETVAEYAAAAAVMRAKCNAVRAPEGAMDIVGTGGDGKGTLNISTATAFVVAGAGVPVAKHGNRNLSSKSGAADALAQMGIEVMVGPAVVERALSEIGIAFMMAPMHHPAIRHVMPTRAELGTRTMFNILGP 181          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_YERPY (Anthranilate phosphoribosyltransferase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=trpD PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.750e-25
Identity = 62/176 (35.23%), Postives = 101/176 (57.39%), Query Frame = 2
Query:  185 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDA-VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            L + L     +++ E+Q     ++  E D + ++A L+ ++ +GET  EI G A+A++  A           DIVGTGGDG N++NIST ++ +AA+CG KVAK             D+L A G+ +D+  E  R  +D+ G+ F+ + +YH   +   PVR++LK +T+FN+LGP
Sbjct:    4 LFEKLFRAESMSQEESQQLFAAIVRGELDPSQLAAVLISMKVRGETPAEIAGAAQALLADAQHFPRPDYLFADIVGTGGDGTNSINISTASAFVAASCGVKVAKHGNRSVSSRSGSSDLLAAFGIRLDMSAEQSRLALDDLGVCFLFAPQYHTGFRHAMPVRQQLKTRTLFNVLGP 179          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_SACD2 (Anthranilate phosphoribosyltransferase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=trpD PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.750e-25
Identity = 65/155 (41.94%), Postives = 88/155 (56.77%), Query Frame = 2
Query:  245 DYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGD-AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            + +  +A +A   AFLV LR K ET  EI G A+ M + A KV    D  VD  GTGGDGAN  N+ST ++ + AA G  VAK             DVLEA GV + +  + V R ++  G+GFM +  +H AMK     RK+L ++T+FN+LGP
Sbjct:   27 EVMTGKATDAQRGAFLVALRIKSETLDEITGAAKVMRELATKVVVNADNLVDTCGTGGDGANLFNVSTASAFVVAAAGGHVAKHGNRSVSSSTGSADVLEAAGVNLQMPADQVARAIETIGVGFMFAPAHHSAMKHAIGPRKELGLRTIFNMLGP 181          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_RUTMC (Anthranilate phosphoribosyltransferase OS=Ruthia magnifica subsp. Calyptogena magnifica GN=trpD PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.750e-25
Identity = 67/178 (37.64%), Postives = 96/178 (53.93%), Query Frame = 2
Query:  182 ELIDCLISRVDLTEAEAQASL-DYLLNEADEALISAFLVLLRAKGETFGEIVGLARAM--IKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            + I  +I + DL+E E    + D +  +  +A I  FLV L  KGE+  EI   A+ M  +  +  ++     VD  GTGGDG    NIST  + + AA G  VAK             DVL+A GV +D+  E + +C+++ GIGFM +  +H AMK V   RK L +KT+FN+LGP
Sbjct:    5 QAIKQIIKKQDLSENEMHKVMNDIMTGKTTDAQIGGFLVGLAIKGESVDEITAAAKTMRSLVKSVTIKNTKHLVDTCGTGGDGLGLFNISTACTFVVAAAGGSVAKHGNSSISSKSGSADVLKAAGVNLDMSVEKISKCIEKIGIGFMFAPFHHIAMKHVIEPRKDLAIKTIFNVLGP 182          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_PYRFU (Anthranilate phosphoribosyltransferase OS=Pyrococcus furiosus GN=trpD PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.750e-25
Identity = 61/152 (40.13%), Postives = 93/152 (61.18%), Query Frame = 2
Query:  251 LLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            +L E  E  I+A+L  L+ KG T  EI G A+AM   A K++ LG+ +D  GTGGD + T+N+ST ++++ +    KVAK             ++LEALG+ I + PE  +  +++    F+ +  YHPA+K + PVRK+L +KT+FNILGP
Sbjct:   22 ILKEESEVRIAAYLAALQTKGYTSEEIAGFAKAMRDNAIKLD-LGEVLDTAGTGGDKSFTINVSTASALILSEY-TKVAKHGNVSVTSRSGSANLLEALGINIKISPEKAKEMIEKVNFTFIFAPMYHPALKRIMPVRKELGIKTIFNILGP 171          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_CHLPD (Anthranilate phosphoribosyltransferase OS=Chlorobium phaeobacteroides (strain DSM 266) GN=trpD PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.750e-25
Identity = 64/176 (36.36%), Postives = 96/176 (54.55%), Query Frame = 2
Query:  182 ELIDCLISRVDLTEAEAQASLDYLLNEA-DEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            +L++ L++  DL   E    ++ +++ A  + +++A L LL+ KG T  E  G   +++  A   +   DAVD  GTGGD   T NIST A+I+A   G  +AK             DVLEALG  IDL P        + G  F+ +  YHP+MK V  VR++L ++T+FN+LGP
Sbjct:    5 KLLNMLMAGKDLAREEMTLCMNNIMDGAFSDIVLAALLALLQKKGVTADEAAGAYASIMARATLCKLDEDAVDTCGTGGDNTGTFNISTAAAIIACGAGVSIAKHGNRSMTSQCGSADVLEALGFAIDLPPSATEELFRQTGFAFLFAPMYHPSMKAVAHVRRELGIRTIFNMLGP 180          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPG_ECOLI (Anthranilate synthase component II OS=Escherichia coli (strain K12) GN=trpD PE=1 SV=3)

HSP 1 Score: 115.161 bits (287), Expect = 3.591e-25
Identity = 59/144 (40.97%), Postives = 90/144 (62.50%), Query Frame = 2
Query:  278 ISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDA-VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            ++A LV ++ +GE   EI G A A+++ AA          DIVGTGGDG+N++NIST ++ +AAACG KVAK             D+L A G+ +D++ +  R+ +DE G+ F+ + KYH   +   PVR++LK +T+FN+LGP
Sbjct:  235 LAAALVSMKIRGEHPNEIAGAATALLENAAPFPRPDYLFADIVGTGGDGSNSINISTASAFVAAACGLKVAKHGNRSVSSKSGSSDLLAAFGINLDMNADKSRQALDELGVCFLFAPKYHTGFRHAMPVRQQLKTRTLFNVLGP 378          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_UNCTG (Anthranilate phosphoribosyltransferase OS=Uncultured termite group 1 bacterium phylotype Rs-D17 GN=trpD PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.591e-25
Identity = 69/176 (39.20%), Postives = 102/176 (57.95%), Query Frame = 2
Query:  182 ELIDCLISRVDLTEAEAQASLDYLLNE-ADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            E I  +++R +LT  + +  ++ +++  A +A I++FL  LR KGET  EI   A  M +   K+    D +DIVGTGGD   T NIST +S + AA G  VAK             D+LE LGV I L P+     + + G+ F+M+  +H +MK+V  VRK+L ++T+FNILGP
Sbjct:    4 EAIYEIVNRNNLTIDKTKEVMNRIMDGGATDAQIASFLTSLRLKGETIEEITACAMVMREKCQKLNPEFDVLDIVGTGGDELATFNISTISSFIIAAAGVPVAKHGNRSVSSKCGSADLLEVLGVNIMLTPQQCEAILKKVGMCFLMAQTFHSSMKYVAKVRKELGIRTIFNILGP 179          
The following BLAST results are available for this feature:
BLAST of CN186080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_SHEB82.105e-2538.27Anthranilate phosphoribosyltransferase OS=Shewanel... [more]
TRPD_PSEHT2.105e-2536.57Anthranilate phosphoribosyltransferase OS=Pseudoal... [more]
TRPD_DINSH2.105e-2539.39Anthranilate phosphoribosyltransferase OS=Dinorose... [more]
TRPD_YERPY2.750e-2535.23Anthranilate phosphoribosyltransferase OS=Yersinia... [more]
TRPD_SACD22.750e-2541.94Anthranilate phosphoribosyltransferase OS=Saccharo... [more]
TRPD_RUTMC2.750e-2537.64Anthranilate phosphoribosyltransferase OS=Ruthia m... [more]
TRPD_PYRFU2.750e-2540.13Anthranilate phosphoribosyltransferase OS=Pyrococc... [more]
TRPD_CHLPD2.750e-2536.36Anthranilate phosphoribosyltransferase OS=Chlorobi... [more]
TRPG_ECOLI3.591e-2540.97Anthranilate synthase component II OS=Escherichia ... [more]
TRPD_UNCTG3.591e-2539.20Anthranilate phosphoribosyltransferase OS=Uncultur... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002F09_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186080 ID=CN186080; Name=CN186080; organism=Citrus sinensis; type=EST; length=708bp
AGGGTTTCTTCCTCTCCATTTAATAATAATCACCCAAACCACCGGCCTTT
CTTACCGTCGCTTGGGAACTGTGGATTTACGACTGCGGGTAATAATCCGA
GATGCAGAGAATTAACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGAT
AGATACTCGTCCTCAAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGA
TAAGTCGAGTGGATTTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTAC
TTGTTGAATGAAGCTGATGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCT
CAGAGCCAAAGGAGAAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGA
TGATAAAGTATGCTGCGAAGGTGGAAGGGCTGGGTGATGCAGTTGACATT
GTGGGTACAGGAGGTGATGGTGCAAACACAGTGAACATTTCAACTGGTGC
TTCAATTCTTGCCGCAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTC
GGTCTAGTTCTTCTGCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGT
GTCGTTATTGACTTGGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGC
AGGAATTGGTTTCATGATGTCGACAAAGTATCACCCTGCAATGAAGTTTG
TCAGGCCAGTGAGGAAAAAGCTCAAAGTAAAAACTGTATTCAATATATTG
GGTCCTAT
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