CN186080

Overview
NameCN186080
Unique NameCN186080
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length708
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig378 contig Csv1_Contig378:145..851. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_FLAJ1 (Anthranilate phosphoribosyltransferase OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=trpD PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.125e-25
Identity = 64/176 (36.36%), Postives = 104/176 (59.09%), Query Frame = 2
Query:  185 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVE-GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            +++ LI+   L++ EA+  L  + + + + + ISAFL +   +  T  E+ G   A+++   +++    + +D+ GTGGDG +T NIST AS +AA  G KVAK             +V+E +G+    DP  + +C+D+AGI  + +  +HPAMK V P+RK+L VKT FN+LGP
Sbjct:    4 ILNKLINHEVLSKEEAKNVLINISSGQYNPSQISAFLTVFMMRSITIDELSGFREALLELCIRIDLSAYNTIDLCGTGGDGKDTFNISTLASFVAAGAGIKVAKHGNYGVSSISGSSNVMEKMGIKFSNDPSFLEKCIDQAGICVLHAPLFHPAMKNVGPIRKELAVKTFFNMLGP 179          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_BRUSU (Anthranilate phosphoribosyltransferase OS=Brucella suis GN=trpD PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.125e-25
Identity = 62/165 (37.58%), Postives = 94/165 (56.97%), Query Frame = 2
Query:  215 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            L+  +A+A+ D +++ +A  + I  FL+ LR +GET  EI G   +M      V    DA+DIVGTGGD + + N+S+  + + A  G  VAK             D L ALG+ I+ D + + R + EAG+GFM +  +H AM+ V P R +L  +T+FN+LGP
Sbjct:   17 LSLGDAKAAFDIMMSGQATPSQIGGFLMALRVRGETVPEIAGAVASMRSRMIPVIAPDDAMDIVGTGGDQSGSYNVSSCTAFVVAGAGVPVAKHGNRALSSRSGAADALAALGINIEADADTIGRSISEAGLGFMFAPMHHSAMRHVSPSRVELGTRTIFNLLGP 181          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_YERPS (Anthranilate phosphoribosyltransferase OS=Yersinia pseudotuberculosis GN=trpD PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.000e-25
Identity = 61/176 (34.66%), Postives = 101/176 (57.39%), Query Frame = 2
Query:  185 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDA-VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            L + L     +++ E+Q     ++  E + + ++A L+ ++ +GET  EI G A+A++  A           DIVGTGGDG N++NIST ++ +AA+CG KVAK             D+L A G+ +D+  E  R  +D+ G+ F+ + +YH   +   PVR++LK +T+FN+LGP
Sbjct:    4 LFEKLFRAESMSQEESQQLFAAIVRGELEPSQLAAVLISMKVRGETPAEIAGAAQALLADAQHFPRPDYLFADIVGTGGDGTNSINISTASAFVAASCGVKVAKHGNRSVSSRSGSSDLLAAFGIRLDMSAEQSRLALDDLGVCFLFAPQYHTGFRHAMPVRQQLKTRTLFNVLGP 179          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_YERPP (Anthranilate phosphoribosyltransferase OS=Yersinia pestis (strain Pestoides F) GN=trpD PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.000e-25
Identity = 61/176 (34.66%), Postives = 101/176 (57.39%), Query Frame = 2
Query:  185 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDA-VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            L + L     +++ E+Q     ++  E + + ++A L+ ++ +GET  EI G A+A++  A           DIVGTGGDG N++NIST ++ +AA+CG KVAK             D+L A G+ +D+  E  R  +D+ G+ F+ + +YH   +   PVR++LK +T+FN+LGP
Sbjct:    4 LFEKLFRAESMSQEESQQLFAAIVRGELEPSQLAAVLISMKVRGETPAEIAGAAQALLADAQHFPRPDYLFADIVGTGGDGTNSINISTASAFVAASCGVKVAKHGNRSVSSRSGSSDLLAAFGIRLDMSAEQSRLALDDLGVCFLFAPQYHTGFRHAMPVRQQLKTRTLFNVLGP 179          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_YERPN (Anthranilate phosphoribosyltransferase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=trpD PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.000e-25
Identity = 61/176 (34.66%), Postives = 101/176 (57.39%), Query Frame = 2
Query:  185 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDA-VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            L + L     +++ E+Q     ++  E + + ++A L+ ++ +GET  EI G A+A++  A           DIVGTGGDG N++NIST ++ +AA+CG KVAK             D+L A G+ +D+  E  R  +D+ G+ F+ + +YH   +   PVR++LK +T+FN+LGP
Sbjct:    4 LFEKLFRAESMSQEESQQLFAAIVRGELEPSQLAAVLISMKVRGETPAEIAGAAQALLADAQHFPRPDYLFADIVGTGGDGTNSINISTASAFVAASCGVKVAKHGNRSVSSRSGSSDLLAAFGIRLDMSAEQSRLALDDLGVCFLFAPQYHTGFRHAMPVRQQLKTRTLFNVLGP 179          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_YERPE (Anthranilate phosphoribosyltransferase OS=Yersinia pestis GN=trpD PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.000e-25
Identity = 61/176 (34.66%), Postives = 101/176 (57.39%), Query Frame = 2
Query:  185 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDA-VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            L + L     +++ E+Q     ++  E + + ++A L+ ++ +GET  EI G A+A++  A           DIVGTGGDG N++NIST ++ +AA+CG KVAK             D+L A G+ +D+  E  R  +D+ G+ F+ + +YH   +   PVR++LK +T+FN+LGP
Sbjct:    5 LFEKLFRAESMSQEESQQLFAAIVRGELEPSQLAAVLISMKVRGETPAEIAGAAQALLADAQHFPRPDYLFADIVGTGGDGTNSINISTASAFVAASCGVKVAKHGNRSVSSRSGSSDLLAAFGIRLDMSAEQSRLALDDLGVCFLFAPQYHTGFRHAMPVRQQLKTRTLFNVLGP 180          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_YERPB (Anthranilate phosphoribosyltransferase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=trpD PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.000e-25
Identity = 61/176 (34.66%), Postives = 101/176 (57.39%), Query Frame = 2
Query:  185 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDA-VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            L + L     +++ E+Q     ++  E + + ++A L+ ++ +GET  EI G A+A++  A           DIVGTGGDG N++NIST ++ +AA+CG KVAK             D+L A G+ +D+  E  R  +D+ G+ F+ + +YH   +   PVR++LK +T+FN+LGP
Sbjct:    4 LFEKLFRAESMSQEESQQLFAAIVRGELEPSQLAAVLISMKVRGETPAEIAGAAQALLADAQHFPRPDYLFADIVGTGGDGTNSINISTASAFVAASCGVKVAKHGNRSVSSRSGSSDLLAAFGIRLDMSAEQSRLALDDLGVCFLFAPQYHTGFRHAMPVRQQLKTRTLFNVLGP 179          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_YERPA (Anthranilate phosphoribosyltransferase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=trpD PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.000e-25
Identity = 61/176 (34.66%), Postives = 101/176 (57.39%), Query Frame = 2
Query:  185 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDA-VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            L + L     +++ E+Q     ++  E + + ++A L+ ++ +GET  EI G A+A++  A           DIVGTGGDG N++NIST ++ +AA+CG KVAK             D+L A G+ +D+  E  R  +D+ G+ F+ + +YH   +   PVR++LK +T+FN+LGP
Sbjct:    4 LFEKLFRAESMSQEESQQLFAAIVRGELEPSQLAAVLISMKVRGETPAEIAGAAQALLADAQHFPRPDYLFADIVGTGGDGTNSINISTASAFVAASCGVKVAKHGNRSVSSRSGSSDLLAAFGIRLDMSAEQSRLALDDLGVCFLFAPQYHTGFRHAMPVRQQLKTRTLFNVLGP 179          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_YERP3 (Anthranilate phosphoribosyltransferase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=trpD PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.000e-25
Identity = 61/176 (34.66%), Postives = 101/176 (57.39%), Query Frame = 2
Query:  185 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDA-VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            L + L     +++ E+Q     ++  E + + ++A L+ ++ +GET  EI G A+A++  A           DIVGTGGDG N++NIST ++ +AA+CG KVAK             D+L A G+ +D+  E  R  +D+ G+ F+ + +YH   +   PVR++LK +T+FN+LGP
Sbjct:    5 LFEKLFRAESMSQEESQQLFAAIVRGELEPSQLAAVLISMKVRGETPAEIAGAAQALLADAQHFPRPDYLFADIVGTGGDGTNSINISTASAFVAASCGVKVAKHGNRSVSSRSGSSDLLAAFGIRLDMSAEQSRLALDDLGVCFLFAPQYHTGFRHAMPVRQQLKTRTLFNVLGP 180          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_SYNY3 (Anthranilate phosphoribosyltransferase OS=Synechocystis sp. (strain PCC 6803) GN=trpD PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.000e-25
Identity = 70/186 (37.63%), Postives = 102/186 (54.84%), Query Frame = 2
Query:  161 PQTPCFNELIDCLISRVDLTEAEAQASLD-YLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEG---LGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            P  P   +L+D    R  LT  +A   ++ +L ++   AL  A L  ++AKG    E+ G+A+ + + +   +G   +   VD  GTGGDG++T NIST  + + AA G KVAK             DVLEALG+ +    + V   V   GI F+ +  +HPA+K V P+RK LKV+TVFN+LGP
Sbjct:    8 PWPPFLQQLLD----RQSLTRQQAVQLMEGWLDDDIPPALSGAILAAIQAKGLDPEELTGMAQVLQEQSQGNQGREMVAPLVDTCGTGGDGSSTFNISTAVAFVVAAAGVKVAKHGNRSASSKVGSADVLEALGLNLQAGADQVAAAVSAVGITFLFAPGWHPALKSVAPIRKTLKVRTVFNLLGP 189          
The following BLAST results are available for this feature:
BLAST of CN186080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_FLAJ16.125e-2536.36Anthranilate phosphoribosyltransferase OS=Flavobac... [more]
TRPD_BRUSU6.125e-2537.58Anthranilate phosphoribosyltransferase OS=Brucella... [more]
TRPD_YERPS8.000e-2534.66Anthranilate phosphoribosyltransferase OS=Yersinia... [more]
TRPD_YERPP8.000e-2534.66Anthranilate phosphoribosyltransferase OS=Yersinia... [more]
TRPD_YERPN8.000e-2534.66Anthranilate phosphoribosyltransferase OS=Yersinia... [more]
TRPD_YERPE8.000e-2534.66Anthranilate phosphoribosyltransferase OS=Yersinia... [more]
TRPD_YERPB8.000e-2534.66Anthranilate phosphoribosyltransferase OS=Yersinia... [more]
TRPD_YERPA8.000e-2534.66Anthranilate phosphoribosyltransferase OS=Yersinia... [more]
TRPD_YERP38.000e-2534.66Anthranilate phosphoribosyltransferase OS=Yersinia... [more]
TRPD_SYNY38.000e-2537.63Anthranilate phosphoribosyltransferase OS=Synechoc... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002F09_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186080 ID=CN186080; Name=CN186080; organism=Citrus sinensis; type=EST; length=708bp
AGGGTTTCTTCCTCTCCATTTAATAATAATCACCCAAACCACCGGCCTTT
CTTACCGTCGCTTGGGAACTGTGGATTTACGACTGCGGGTAATAATCCGA
GATGCAGAGAATTAACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGAT
AGATACTCGTCCTCAAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGA
TAAGTCGAGTGGATTTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTAC
TTGTTGAATGAAGCTGATGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCT
CAGAGCCAAAGGAGAAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGA
TGATAAAGTATGCTGCGAAGGTGGAAGGGCTGGGTGATGCAGTTGACATT
GTGGGTACAGGAGGTGATGGTGCAAACACAGTGAACATTTCAACTGGTGC
TTCAATTCTTGCCGCAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTC
GGTCTAGTTCTTCTGCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGT
GTCGTTATTGACTTGGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGC
AGGAATTGGTTTCATGATGTCGACAAAGTATCACCCTGCAATGAAGTTTG
TCAGGCCAGTGAGGAAAAAGCTCAAAGTAAAAACTGTATTCAATATATTG
GGTCCTAT
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