CN186080

Overview
NameCN186080
Unique NameCN186080
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length708
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig378 contig Csv1_Contig378:145..851. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_SULTO (Anthranilate phosphoribosyltransferase OS=Sulfolobus tokodaii GN=trpD PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.000e-25
Identity = 72/176 (40.91%), Postives = 100/176 (56.82%), Query Frame = 2
Query:  182 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            EL+  +I R +LTE EA++  + ++  E  E + + FLV L  KGE+  EI G A+AM   A  +     A+D  GTGGDG NT+N+ST  ++L +     VAK             DVLEALG  I + PE   + + E+   F+ +  YHPAMK V  VRK L V+T+FN+LGP
Sbjct:    5 ELLRKIIRRENLTEDEARSIANSVMKAEVPEIVTAGFLVGLATKGESVEEITGFAKAMRDNALHIN-FPSALDTAGTGGDGLNTLNVSTAVALLISQV-YPVAKHGNRAVSGKSGSADVLEALGYNIIVKPELAEKLIKESKFVFLFAQLYHPAMKNVANVRKTLGVRTIFNVLGP 178          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_SHEON (Anthranilate phosphoribosyltransferase OS=Shewanella oneidensis GN=trpD PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.000e-25
Identity = 68/181 (37.57%), Postives = 100/181 (55.25%), Query Frame = 2
Query:  185 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDA------VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            L+D L     LT  +  +    L+  E +E +++  L+ L+ +GET  EI G A AM + AAK     ++      +DIVGTGGDG NT+NIST A+ +AAA GAKVAK             D+L   G+ + + PE    C++   + F+ +  YH  +K   PVR+ LK +T+FN+LGP
Sbjct:    9 LLDILFQGKALTREQTASLFSVLIQGEMNETVMAGMLMALKIRGETIEEISGAADAM-RAAAKPFPYPESSRSQGVIDIVGTGGDGFNTINISTTAAFVAAAAGAKVAKHGNRSVSSKSGSSDLLAQFGIDLTMSPELASHCLEALNLCFLFAPHYHGGVKHAVPVRQTLKTRTLFNVLGP 188          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_PECCP (Anthranilate phosphoribosyltransferase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=trpD PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.000e-25
Identity = 63/196 (32.14%), Postives = 106/196 (54.08%), Query Frame = 2
Query:  125 KPLSRLFLIDTRPQTPCFNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDA-VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            KP S+     T         +++ L     ++  E+QA    ++  E + + ++A L+ ++ +GE   EI G A A++  A           DIVGTGGDG N++NIST ++ +AA+CG K+AK             D+L A G+ +D+  +  R+ +D+ G+ F+ + +YH   +   PVR++LK +TVFN+LGP
Sbjct:    7 KPSSKTREPSTAQDIVTMQNILEKLYRAESISRQESQALFGAIIRGELEASQLAAALISMKVRGEHPDEIAGAATALLADAQPFPRPDYLFADIVGTGGDGTNSINISTASAFVAASCGLKIAKHGNRSVSSRSGSSDLLSAFGIKLDMSAQDSRQALDDLGVCFLFAPQYHLGFRHAMPVRQQLKTRTVFNVLGP 202          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_LACPL (Anthranilate phosphoribosyltransferase OS=Lactobacillus plantarum GN=trpD PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.000e-25
Identity = 64/166 (38.55%), Postives = 91/166 (54.82%), Query Frame = 2
Query:  209 VDLTEAEAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            +D T ++ Q   + +  +A +A I +FL  L  K  T  EI G A AM   A   +     ++IVGTGGD +N+ NIST  +++ AA G  V K             DVLEALG+ IDL P      ++     FM + +YH AM+FV P R+++K+ T+FNILGP
Sbjct:   15 LDFTMSQ-QVITEIMKGQATDAQIGSFLTALAIKKATIDEIAGAATAMRSQALPFKVKRPTLEIVGTGGDRSNSFNISTTTALVVAAAGVPVTKHGNRAASSKSGAADVLEALGIKIDLTPAQSLALLERTNFAFMYAREYHQAMRFVAPARQQIKIPTIFNILGP 179          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_LACLS (Anthranilate phosphoribosyltransferase OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=trpD PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.000e-25
Identity = 68/178 (38.20%), Postives = 103/178 (57.87%), Query Frame = 2
Query:  179 NELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVE-GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            NEL   +  R D+TE E     + ++  E  +  I++FLV L+ KGE+  E+ GLARA+ K A  +   L +A+D  GTGGD + + NIST A+ + AA G  +AK             DVLEALG+ + L  E + +  D+ G+ F+ +   HPAMK+  PVR++L++ T+ N+ GP
Sbjct:    3 NELEKVMAGR-DMTENEMNMLANSIIQGELSDVQIASFLVALKMKGESASELTGLARALQKAAISIPTNLTNAMDNCGTGGDRSFSFNISTTAAFVLAAGGVNMAKHGNRSITSKSGSADVLEALGINLYLPAEKLAQVFDKVGLVFLFAQNLHPAMKYFTPVRRQLEIPTIMNLTGP 179          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_LACLM (Anthranilate phosphoribosyltransferase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=trpD PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.000e-25
Identity = 68/178 (38.20%), Postives = 103/178 (57.87%), Query Frame = 2
Query:  179 NELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVE-GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            NEL   +  R D+TE E     + ++  E  +  I++FLV L+ KGE+  E+ GLARA+ K A  +   L +A+D  GTGGD + + NIST A+ + AA G  +AK             DVLEALG+ + L  E + +  D+ G+ F+ +   HPAMK+  PVR++L++ T+ N+ GP
Sbjct:    3 NELEKVMAGR-DMTENEMNMLANSIIQGELSDVQIASFLVALKMKGESASELTGLARALQKAAISIPTNLTNAMDNCGTGGDRSFSFNISTTAAFVLAAGGVNMAKHGNRSITSKSGSADVLEALGINLYLPAEKLAQVFDKVGLVFLFAQNLHPAMKYFTPVRRQLEIPTIMNLTGP 179          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_LACLA (Anthranilate phosphoribosyltransferase OS=Lactococcus lactis subsp. lactis GN=trpD PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.000e-25
Identity = 69/178 (38.76%), Postives = 102/178 (57.30%), Query Frame = 2
Query:  179 NELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVE-GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            NEL   +  R D+TE E     + ++  E  E  I++FLV L+ KGE   E+ GLARA+ K A  +   L +A+D  GTGGD + + NIST A+ + AA G  +AK             DVLEALG+ + L  E + +  D+ G+ F+ +   HPAMK+  PVR++L++ T+ N+ GP
Sbjct:    3 NELEKVMSGR-DMTENEMNMLANSIIQGELSEVQIASFLVALKMKGEAASELTGLARALQKAAIPIPTNLTNAMDNCGTGGDRSFSFNISTTAAFVLAAGGVNMAKHGNRSITSKSGSADVLEALGINLYLPAEKLAQVFDKVGLVFLFAQNLHPAMKYFTPVRRQLEIPTIMNLTGP 179          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_BRUSI (Anthranilate phosphoribosyltransferase OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=trpD PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.000e-25
Identity = 62/165 (37.58%), Postives = 94/165 (56.97%), Query Frame = 2
Query:  215 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            L+  +A+A+ D +++ +A  + I  FL+ LR +GET  EI G   +M      V    DA+DIVGTGGD + + N+S+  + + A  G  VAK             D L ALG+ I+ D + + R + EAG+GFM +  +H AM+ V P R +L  +T+FN+LGP
Sbjct:   17 LSLGDAKAAFDIMMSGQATPSQIGGFLMALRVRGETVPEIAGAVASMRSRMIPVIAPDDAMDIVGTGGDQSGSYNVSSCTAFVVAGAGVPVAKHGNRALSSRSGAADTLAALGINIEADADTIGRSISEAGLGFMFAPMHHSAMRHVGPSRVELGTRTIFNLLGP 181          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_BRUC2 (Anthranilate phosphoribosyltransferase OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=trpD PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.000e-25
Identity = 62/165 (37.58%), Postives = 94/165 (56.97%), Query Frame = 2
Query:  215 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            L+  +A+A+ D +++ +A  + I  FL+ LR +GET  EI G   +M      V    DA+DIVGTGGD + + N+S+  + + A  G  VAK             D L ALG+ I+ D + + R + EAG+GFM +  +H AM+ V P R +L  +T+FN+LGP
Sbjct:   17 LSLGDAKAAFDIMMSGQATPSQIGGFLMALRVRGETVPEIAGAVASMRSRMIPVIAPDDAMDIVGTGGDQSGSYNVSSCTAFVVAGAGVPVAKHGNRALSSRSGAADALAALGINIEADADTIGRSISEAGLGFMFAPMHHSAMRHVGPSRVELGTRTIFNLLGP 181          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_PROM1 (Anthranilate phosphoribosyltransferase OS=Prochlorococcus marinus (strain NATL1A) GN=trpD PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.045e-24
Identity = 65/180 (36.11%), Postives = 104/180 (57.78%), Query Frame = 2
Query:  176 FNELIDCLISRVDLTEAEAQASLD-YLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLG--DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            F  +++ L++  DLTE +++  ++ +L N+ +     AFL  LRAKG +  E+  +A+ +   +     L   D VD  GTGGDGANT NISTG + ++AA G K+AK             DVLE LG+ +++    V   + + GI F+ +  +HP++  + P+RK L V+T+FN+LGP
Sbjct:    9 FPVILESLLASNDLTEEQSKFLMNSWLENKIEPVQTGAFLAALRAKGVSGDELSAMAKILQDASTTPSDLPSFDLVDTCGTGGDGANTFNISTGVAFVSAALGVKIAKHGNRSASGKVGSADVLENLGLPLNVSSGKVVEALKKLGITFLFAPSWHPSLVNLAPLRKSLGVRTIFNLLGP 188          
The following BLAST results are available for this feature:
BLAST of CN186080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_SULTO8.000e-2540.91Anthranilate phosphoribosyltransferase OS=Sulfolob... [more]
TRPD_SHEON8.000e-2537.57Anthranilate phosphoribosyltransferase OS=Shewanel... [more]
TRPD_PECCP8.000e-2532.14Anthranilate phosphoribosyltransferase OS=Pectobac... [more]
TRPD_LACPL8.000e-2538.55Anthranilate phosphoribosyltransferase OS=Lactobac... [more]
TRPD_LACLS8.000e-2538.20Anthranilate phosphoribosyltransferase OS=Lactococ... [more]
TRPD_LACLM8.000e-2538.20Anthranilate phosphoribosyltransferase OS=Lactococ... [more]
TRPD_LACLA8.000e-2538.76Anthranilate phosphoribosyltransferase OS=Lactococ... [more]
TRPD_BRUSI8.000e-2537.58Anthranilate phosphoribosyltransferase OS=Brucella... [more]
TRPD_BRUC28.000e-2537.58Anthranilate phosphoribosyltransferase OS=Brucella... [more]
TRPD_PROM11.045e-2436.11Anthranilate phosphoribosyltransferase OS=Prochlor... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002F09_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186080 ID=CN186080; Name=CN186080; organism=Citrus sinensis; type=EST; length=708bp
AGGGTTTCTTCCTCTCCATTTAATAATAATCACCCAAACCACCGGCCTTT
CTTACCGTCGCTTGGGAACTGTGGATTTACGACTGCGGGTAATAATCCGA
GATGCAGAGAATTAACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGAT
AGATACTCGTCCTCAAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGA
TAAGTCGAGTGGATTTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTAC
TTGTTGAATGAAGCTGATGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCT
CAGAGCCAAAGGAGAAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGA
TGATAAAGTATGCTGCGAAGGTGGAAGGGCTGGGTGATGCAGTTGACATT
GTGGGTACAGGAGGTGATGGTGCAAACACAGTGAACATTTCAACTGGTGC
TTCAATTCTTGCCGCAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTC
GGTCTAGTTCTTCTGCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGT
GTCGTTATTGACTTGGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGC
AGGAATTGGTTTCATGATGTCGACAAAGTATCACCCTGCAATGAAGTTTG
TCAGGCCAGTGAGGAAAAAGCTCAAAGTAAAAACTGTATTCAATATATTG
GGTCCTAT
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