CN186080

Overview
NameCN186080
Unique NameCN186080
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length708
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig378 contig Csv1_Contig378:145..851. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_HELP2 (Anthranilate phosphoribosyltransferase OS=Helicobacter pylori (strain P12) GN=trpD PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.365e-24
Identity = 63/177 (35.59%), Postives = 99/177 (55.93%), Query Frame = 2 
Query:  182 ELIDCLISRVDLTEAEAQASLDYLLNE-ADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLG-DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            E+++ L  + DL++ E +     +++E      + A L  L+ KGE+F EI   A  ++++A K    G D +D  GTGGDG  T+NIST A+++A++ G  +AK             D+LE LGV I++DP  +  C  +   GF+ +  YH + K   P+RK+L  KT+FN LGP
Sbjct:    3 EILNALYHQKDLSDKEVKKLFTLIIHEKVSPVQLGAILCALKIKGESFKEISVAATTLLEHAPKPFDSGLDLIDNCGTGGDGLKTINISTIAALIASSMGLSMAKHGSRSVSSHSGSADLLENLGVNIEMDPTQLENCFKQTHFGFLFAPLYHQSFKKSAPLRKELFTKTIFNCLGP 179
[Close]
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_HALVO (Anthranilate phosphoribosyltransferase OS=Halobacterium volcanii GN=trpD PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.365e-24
Identity = 73/180 (40.56%), Postives = 97/180 (53.89%), Query Frame = 2 
Query:  182 ELIDCLISRVDLTEAEAQASLDYLLNE-ADEALISAFLVLLRAKGETFGEIVGLARAMIKYAA--KVEGLGDAVDIVGTGGDGANTVNI--STGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            + I+ +    DLT  EA+       +E A EA I A L  LRAKGET  EI G A+ M   A   +      + D  GTGGD  NT+N+   T  S  AA   A VAK             DVLE  GV ++ +PE V  C+++ G+GFM++  +HPAMK V   RK+L ++TVFN+LGP
Sbjct:    3 DYIERVTGGADLTVEEARRPPRGRSSEDATEAQIGALLAALRAKGETEAEIAGFAQGMRDAALIHRARPAARSSDTAGTGGDDYNTINVLDPTTRSSAAAPGAAAVAKHGNYSVSSSSGSADVLEVAGVNVEAEPESVEACIEDNGVGFMLAPVFHPAMKAVIGPRKELGMRTVFNVLGP 182
[Close]
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_HALSA (Anthranilate phosphoribosyltransferase OS=Halobacterium salinarium GN=trpD PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.365e-24
Identity = 69/176 (39.20%), Postives = 97/176 (55.11%), Query Frame = 2 
Query:  182 ELIDCLISRVDLTEAEAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVE-GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            E I+ + +  DL+   A+ ++  L  +A +A I A L  LRAKGET  EI G A+ M   A  V       VD  GTGGD  +T+N+ST A+++AA  G   AK             DVL+ALGV +  DP  V   ++  GIG+M +  +HP M+ V   R+ L V+T+FN+LGP
Sbjct:    3 EYIERVAAGEDLSLDAARDAVTTLFEDATDAEIGALLGALRAKGETEAEIAGFAQGMRDAAITVAPDCTPLVDTCGTGGDDYDTINVSTTAALVAAGAGIPTAKHGNYSVSSASGSSDVLDALGVELATDPAAVEARIETDGIGYMHAPAFHPGMEAVIGPRRDLGVRTIFNLLGP 178
[Close]
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_HALS3 (Anthranilate phosphoribosyltransferase OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=trpD PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.365e-24
Identity = 69/176 (39.20%), Postives = 97/176 (55.11%), Query Frame = 2 
Query:  182 ELIDCLISRVDLTEAEAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVE-GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            E I+ + +  DL+   A+ ++  L  +A +A I A L  LRAKGET  EI G A+ M   A  V       VD  GTGGD  +T+N+ST A+++AA  G   AK             DVL+ALGV +  DP  V   ++  GIG+M +  +HP M+ V   R+ L V+T+FN+LGP
Sbjct:    3 EYIERVAAGEDLSLDAARDAVTTLFEDATDAEIGALLGALRAKGETEAEIAGFAQGMRDAAITVAPDCTPLVDTCGTGGDDYDTINVSTTAALVAAGAGIPTAKHGNYSVSSASGSSDVLDALGVELATDPAAVEARIETDGIGYMHAPAFHPGMEAVIGPRRDLGVRTIFNLLGP 178
[Close]
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_BRUO2 (Anthranilate phosphoribosyltransferase OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=trpD PE=3 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 1.365e-24
Identity = 61/161 (37.89%), Postives = 92/161 (57.14%), Query Frame = 2 
Query:  227 EAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            +A+A+ D +++ +A  + I  FL+ LR +GET  EI G   +M      V    DA+DIVGTGGD + + N+S+  + + A  G  VAK             D L ALG+ I+ D + + R + EAG+GFM +  +H AM+ V P R +L  +T+FN+LGP
Sbjct:   21 DAKAAFDIMMSGQATPSQIGGFLMALRVRGETVPEIAGAVASMRSRMIPVIAPDDAMDIVGTGGDQSGSYNVSSCTAFVVAGAGVPVAKHGNRALSSRSGAADALAALGINIEADADTIGRSISEAGLGFMFAPMHHSAMRHVGPSRVELGTRTIFNLLGP 181
[Close]
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_BRUME (Anthranilate phosphoribosyltransferase OS=Brucella melitensis GN=trpD PE=3 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 1.365e-24
Identity = 61/161 (37.89%), Postives = 92/161 (57.14%), Query Frame = 2 
Query:  227 EAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            +A+A+ D +++ +A  + I  FL+ LR +GET  EI G   +M      V    DA+DIVGTGGD + + N+S+  + + A  G  VAK             D L ALG+ I+ D + + R + EAG+GFM +  +H AM+ V P R +L  +T+FN+LGP
Sbjct:   21 DAKAAFDIMMSGQATPSQIGGFLMALRVRGETVPEIAGAVASMRSRMIPVIAPDDAMDIVGTGGDQSGSYNVSSCTAFVVAGAGVPVAKHGNRALSSRSGAADALAALGINIEADADTIGRSISEAGLGFMFAPMHHSAMRHVGPSRVELGTRTIFNLLGP 181
[Close]
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_BRUMB (Anthranilate phosphoribosyltransferase OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=trpD PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.365e-24
Identity = 61/161 (37.89%), Postives = 92/161 (57.14%), Query Frame = 2 
Query:  227 EAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            +A+A+ D +++ +A  + I  FL+ LR +GET  EI G   +M      V    DA+DIVGTGGD + + N+S+  + + A  G  VAK             D L ALG+ I+ D + + R + EAG+GFM +  +H AM+ V P R +L  +T+FN+LGP
Sbjct:   21 DAKAAFDIMMSGQATPSQIGGFLMALRVRGETVPEIAGAVASMRSRMIPVIAPDDAMDIVGTGGDQSGSYNVSSCTAFVVAGAGVPVAKHGNRALSSRSGAADALAALGINIEADADTIGRSISEAGLGFMFAPMHHSAMRHVGPSRVELGTRTIFNLLGP 181
[Close]
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_BRUAB (Anthranilate phosphoribosyltransferase OS=Brucella abortus GN=trpD PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.365e-24
Identity = 61/161 (37.89%), Postives = 92/161 (57.14%), Query Frame = 2 
Query:  227 EAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            +A+A+ D +++ +A  + I  FL+ LR +GET  EI G   +M      V    DA+DIVGTGGD + + N+S+  + + A  G  VAK             D L ALG+ I+ D + + R + EAG+GFM +  +H AM+ V P R +L  +T+FN+LGP
Sbjct:   21 DAKAAFDIMMSGQATPSQIGGFLMALRVRGETVPEIAGAVASMRSRMIPVIAPDDAMDIVGTGGDQSGSYNVSSCTAFVVAGAGVPVAKHGNRALSSRSGAADALAALGINIEADADTIGRSISEAGLGFMFAPMHHSAMRHVGPSRVELGTRTIFNLLGP 181
[Close]
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_BRUA2 (Anthranilate phosphoribosyltransferase OS=Brucella abortus (strain 2308) GN=trpD PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.365e-24
Identity = 61/161 (37.89%), Postives = 92/161 (57.14%), Query Frame = 2 
Query:  227 EAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            +A+A+ D +++ +A  + I  FL+ LR +GET  EI G   +M      V    DA+DIVGTGGD + + N+S+  + + A  G  VAK             D L ALG+ I+ D + + R + EAG+GFM +  +H AM+ V P R +L  +T+FN+LGP
Sbjct:   21 DAKAAFDIMMSGQATPSQIGGFLMALRVRGETVPEIAGAVASMRSRMIPVIAPDDAMDIVGTGGDQSGSYNVSSCTAFVVAGAGVPVAKHGNRALSSRSGAADALAALGINIEADADTIGRSISEAGLGFMFAPMHHSAMRHVGPSRVELGTRTIFNLLGP 181
[Close]
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_BRUA1 (Anthranilate phosphoribosyltransferase OS=Brucella abortus (strain S19) GN=trpD PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.365e-24
Identity = 61/161 (37.89%), Postives = 92/161 (57.14%), Query Frame = 2 
Query:  227 EAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            +A+A+ D +++ +A  + I  FL+ LR +GET  EI G   +M      V    DA+DIVGTGGD + + N+S+  + + A  G  VAK             D L ALG+ I+ D + + R + EAG+GFM +  +H AM+ V P R +L  +T+FN+LGP
Sbjct:   21 DAKAAFDIMMSGQATPSQIGGFLMALRVRGETVPEIAGAVASMRSRMIPVIAPDDAMDIVGTGGDQSGSYNVSSCTAFVVAGAGVPVAKHGNRALSSRSGAADALAALGINIEADADTIGRSISEAGLGFMFAPMHHSAMRHVGPSRVELGTRTIFNLLGP 181
The following BLAST results are available for this feature:
BLAST of CN186080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_HELP21.365e-2435.59Anthranilate phosphoribosyltransferase OS=Helicoba... [more]
TRPD_HALVO1.365e-2440.56Anthranilate phosphoribosyltransferase OS=Halobact... [more]
TRPD_HALSA1.365e-2439.20Anthranilate phosphoribosyltransferase OS=Halobact... [more]
TRPD_HALS31.365e-2439.20Anthranilate phosphoribosyltransferase OS=Halobact... [more]
TRPD_BRUO21.365e-2437.89Anthranilate phosphoribosyltransferase OS=Brucella... [more]
TRPD_BRUME1.365e-2437.89Anthranilate phosphoribosyltransferase OS=Brucella... [more]
TRPD_BRUMB1.365e-2437.89Anthranilate phosphoribosyltransferase OS=Brucella... [more]
TRPD_BRUAB1.365e-2437.89Anthranilate phosphoribosyltransferase OS=Brucella... [more]
TRPD_BRUA21.365e-2437.89Anthranilate phosphoribosyltransferase OS=Brucella... [more]
TRPD_BRUA11.365e-2437.89Anthranilate phosphoribosyltransferase OS=Brucella... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002F09_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186080 ID=CN186080; Name=CN186080; organism=Citrus sinensis; type=EST; length=708bp
AGGGTTTCTTCCTCTCCATTTAATAATAATCACCCAAACCACCGGCCTTT
CTTACCGTCGCTTGGGAACTGTGGATTTACGACTGCGGGTAATAATCCGA
GATGCAGAGAATTAACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGAT
AGATACTCGTCCTCAAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGA
TAAGTCGAGTGGATTTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTAC
TTGTTGAATGAAGCTGATGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCT
CAGAGCCAAAGGAGAAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGA
TGATAAAGTATGCTGCGAAGGTGGAAGGGCTGGGTGATGCAGTTGACATT
GTGGGTACAGGAGGTGATGGTGCAAACACAGTGAACATTTCAACTGGTGC
TTCAATTCTTGCCGCAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTC
GGTCTAGTTCTTCTGCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGT
GTCGTTATTGACTTGGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGC
AGGAATTGGTTTCATGATGTCGACAAAGTATCACCCTGCAATGAAGTTTG
TCAGGCCAGTGAGGAAAAAGCTCAAAGTAAAAACTGTATTCAATATATTG
GGTCCTAT
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