CN186080

Overview
NameCN186080
Unique NameCN186080
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length708
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig378 contig Csv1_Contig378:145..851. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_THETH (Anthranilate phosphoribosyltransferase OS=Thermus thermophilus PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.782e-24
Identity = 69/166 (41.57%), Postives = 94/166 (56.63%), Query Frame = 2
Query:  215 LTEAEAQASLDYLL-NEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVE-GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            L E EA   +  L+  E      +  LV L  +GE   EI  +ARAM + A  +       +DIVGTGGDG   +N+ST A+++AAA G  VAK             D+LEALGV ++  PE V   ++E G GF+ +  +HPAM+ V PVR +L V+TVFN+LGP
Sbjct:   13 LEEEEAYEVMRALMAGEVSPVRAAGLLVALSLRGERPHEIAAMARAMREAARPLRVHRRPLLDIVGTGGDGKGLMNLSTLAALVAAAGGVAVAKHGNRAASSRAGSADLLEALGVDLEAPPERVGEAIEELGFGFLFARVFHPAMRHVAPVRAELGVRTVFNLLGP 178          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_THET8 (Anthranilate phosphoribosyltransferase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=trpD PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.782e-24
Identity = 69/166 (41.57%), Postives = 94/166 (56.63%), Query Frame = 2
Query:  215 LTEAEAQASLDYLL-NEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVE-GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            L E EA   +  L+  E      +  LV L  +GE   EI  +ARAM + A  +       +DIVGTGGDG   +N+ST A+++AAA G  VAK             D+LEALGV ++  PE V   ++E G GF+ +  +HPAM+ V PVR +L V+TVFN+LGP
Sbjct:   13 LEEEEAYEVMRALMAGEVSPVRAAGLLVALSLRGERPHEIAAMARAMREAARPLRVHRRPLLDIVGTGGDGKGLMNLSTLAALVAAAGGVAVAKHGNRAASSRAGSADLLEALGVDLEAPPERVGEAIEELGFGFLFARVFHPAMRHVAPVRAELGVRTVFNLLGP 178          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_THET2 (Anthranilate phosphoribosyltransferase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=trpD PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.782e-24
Identity = 69/166 (41.57%), Postives = 94/166 (56.63%), Query Frame = 2
Query:  215 LTEAEAQASLDYLL-NEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVE-GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            L E EA   +  L+  E      +  LV L  +GE   EI  +ARAM + A  +       +DIVGTGGDG   +N+ST A+++AAA G  VAK             D+LEALGV ++  PE V   ++E G GF+ +  +HPAM+ V PVR +L V+TVFN+LGP
Sbjct:   13 LEEEEAYEVMRALMAGEVSPVRAAGLLVALSLRGERPHEIAAMARAMREAARPLRVHRRPLLDIVGTGGDGKGLMNLSTLAALVAAAGGVAVAKHGNRAASSRAGSADLLEALGVDLEAPPERVGEAIEELGFGFLFARVFHPAMRHVAPVRAELGVRTVFNLLGP 178          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_GRABC (Anthranilate phosphoribosyltransferase OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=trpD PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.782e-24
Identity = 59/165 (35.76%), Postives = 92/165 (55.76%), Query Frame = 2
Query:  215 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            L E EA A+ D ++  +A  + I+A ++ LR +GET  E+ G  RA+  +   ++    A+D+ GTGGDGA T+NIST  + + A CG  +AK             DVL ALGV IDL  E     + +    F+ +  +HPA++     R +L ++T+FN++GP
Sbjct:   25 LNEEEAFAAFDLIMRGQATSSQIAALVMALRLRGETEAEMGGAVRALRSHMIPIKAPDGAIDVCGTGGDGAGTLNISTAVTFVVAGCGIPIAKHGNRALSSRSGAADVLTALGVQIDLGTERQEAILHDEHCAFLFAPHFHPALRHAAEARSQLGIRTLFNLIGP 189          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_CHLCH (Anthranilate phosphoribosyltransferase OS=Chlorobium chlorochromatii (strain CaD3) GN=trpD PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.782e-24
Identity = 62/176 (35.23%), Postives = 100/176 (56.82%), Query Frame = 2
Query:  182 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            +L+  L++    ++ E Q  ++ +++ E  +++I+A L LL+ KG    E+ G   +++ +A  V     AVD  GTGGD   T NIST AS++A + G +VAK             DVLEALG  ++L PE       + G  F+ +  YHP+MK V  +R++L ++T+FN+LGP
Sbjct:    5 QLLQKLLAGEHCSKEEMQDCMNSIMDGEFSDSVIAALLALLQKKGVVANELAGAHASLMAHATTVALSTHAVDTCGTGGDHGGTYNISTTASLIACSAGVRVAKHGNRSVTSSCGSADVLEALGFTLELPPEATISLFKKTGFAFLFAPLYHPSMKRVAHIRRELGIRTLFNMLGP 180          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_PROMM (Anthranilate phosphoribosyltransferase OS=Prochlorococcus marinus (strain MIT 9313) GN=trpD PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.328e-24
Identity = 68/180 (37.78%), Postives = 99/180 (55.00%), Query Frame = 2
Query:  176 FNELIDCLISRVDLTEAEAQASLD-YLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDA--VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            ++++++ L+   +L E EA A ++ +L  +       AFL  LRAKG T  E+ G+A+ +         L D   VD  GTGGDGA+T NIST  +  AAACGA VAK             DVLE LG+ +      V   + E G+ F+ +  +HPA+  + P+R+ L V+TVFN+LGP
Sbjct:   11 WSQILEMLLEGQNLPEVEATALMEAWLAEQLTPVQTGAFLAALRAKGVTGNELSGMAQVLRGACPLPCPLPDIPMVDTCGTGGDGADTFNISTAVAFTAAACGANVAKHGNRSASGKVGSADVLEGLGLQLKAPLVSVVEALVEVGVTFLFAPAWHPALVNLAPLRRSLGVRTVFNLLGP 190          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_PHOLL (Anthranilate phosphoribosyltransferase OS=Photorhabdus luminescens subsp. laumondii GN=trpD PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.328e-24
Identity = 64/172 (37.21%), Postives = 96/172 (55.81%), Query Frame = 2
Query:  197 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAV-DIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            L +   LT+ E+Q     ++  E  E  ++A L+ ++ +GE   EI G A+A++  A           DIVGTGGDGAN++NIST ++ +A+AC  K+AK             D+L A G+ +D+  E  R  +DE GI F+ +  YH       PVR++LK +T+FNILGP
Sbjct:    8 LFNAQTLTQQESQQLFAAIIQGELSEPQLAAVLISMKLRGEQPQEIAGAAQALLANALPFPRPDYTFCDIVGTGGDGANSINISTASAFVASACQIKIAKHGNRSVSSQSGSSDLLAAFGIALDISAECARSALDEIGICFLFAPHYHLGFCHAMPVRQQLKTRTIFNILGP 179          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_FLAPJ (Anthranilate phosphoribosyltransferase OS=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) GN=trpD PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.328e-24
Identity = 63/176 (35.80%), Postives = 102/176 (57.95%), Query Frame = 2
Query:  185 LIDCLISRVDLTEAEAQASLDYLLNEA-DEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVE-GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            +++ LI+   L++ EA+  L  + N + + + I++FL +   +  T  E+ G   A+++    ++    + +D+ GTGGDG +T NIST AS + A  G KVAK             +V+E LG+    DP  + +C+D+AGI  + +  +HPAMK V P+RK+L VKT FN+LGP
Sbjct:    4 ILNRLINHETLSKQEAKNMLVNISNGSYNPSQIASFLTVYMMRNITINELAGFREALLELCIPIDLSAYNTIDLCGTGGDGKDTFNISTLASFVTAGAGIKVAKHGNYGVSSISGSSNVMENLGIKFSNDPIFLEKCIDQAGICVLHAPLFHPAMKNVAPIRKELAVKTFFNMLGP 179          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_ERWCT (Anthranilate phosphoribosyltransferase OS=Erwinia carotovora subsp. atroseptica GN=trpD PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.328e-24
Identity = 62/196 (31.63%), Postives = 106/196 (54.08%), Query Frame = 2
Query:  125 KPLSRLFLIDTRPQTPCFNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDA-VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            +P S+     T         +++ L     ++  E+QA    ++  E + + ++A L+ ++ +GE   EI G A A++  A           DIVGTGGDG N++NIST ++ +AA+CG K+AK             D+L A G+ +D+  +  R+ +D+ G+ F+ + +YH   +   PVR++LK +TVFN+LGP
Sbjct:    7 QPSSKTQEPSTAQDVITMQHILEKLYGANSISRQESQALFGAIIRGELEASQLAAALISMKVRGEHPDEIAGAATALLADAQPFPRPDYLFADIVGTGGDGTNSINISTASAFVAASCGLKIAKHGNRSVSSRSGSSDLLSAFGIKLDMSAQDSRQALDDLGVCFLFAPQYHLGFRHAMPVRQQLKTRTVFNVLGP 202          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_CORGL (Anthranilate phosphoribosyltransferase OS=Corynebacterium glutamicum GN=trpD PE=3 SV=3)

HSP 1 Score: 112.464 bits (280), Expect = 2.328e-24
Identity = 61/153 (39.87%), Postives = 90/153 (58.82%), Query Frame = 2
Query:  254 LNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAK--VEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            + E D+  I+A L  +R +GE F +I G A+A +  A    + G G  +D  GTGGDGANT+NI+TGAS++AA+ G K+ K             DVLEAL + + LD +   +  + +   F+ +  Y+PA+  V+PVR+ LK  T+FN LGP
Sbjct:   33 VGEYDDVHIAALLATIRTRGEQFADIAGAAKAFLAAARPFPITGAG-LLDSAGTGGDGANTINITTGASLIAASGGVKLVKHGNRSVSSKSGSADVLEALNIPLGLDVDRAVKWFEASNFTFLFAPAYNPAIAHVQPVRQALKFPTIFNTLGP 184          
The following BLAST results are available for this feature:
BLAST of CN186080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_THETH1.782e-2441.57Anthranilate phosphoribosyltransferase OS=Thermus ... [more]
TRPD_THET81.782e-2441.57Anthranilate phosphoribosyltransferase OS=Thermus ... [more]
TRPD_THET21.782e-2441.57Anthranilate phosphoribosyltransferase OS=Thermus ... [more]
TRPD_GRABC1.782e-2435.76Anthranilate phosphoribosyltransferase OS=Granulib... [more]
TRPD_CHLCH1.782e-2435.23Anthranilate phosphoribosyltransferase OS=Chlorobi... [more]
TRPD_PROMM2.328e-2437.78Anthranilate phosphoribosyltransferase OS=Prochlor... [more]
TRPD_PHOLL2.328e-2437.21Anthranilate phosphoribosyltransferase OS=Photorha... [more]
TRPD_FLAPJ2.328e-2435.80Anthranilate phosphoribosyltransferase OS=Flavobac... [more]
TRPD_ERWCT2.328e-2431.63Anthranilate phosphoribosyltransferase OS=Erwinia ... [more]
TRPD_CORGL2.328e-2439.87Anthranilate phosphoribosyltransferase OS=Coryneba... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002F09_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186080 ID=CN186080; Name=CN186080; organism=Citrus sinensis; type=EST; length=708bp
AGGGTTTCTTCCTCTCCATTTAATAATAATCACCCAAACCACCGGCCTTT
CTTACCGTCGCTTGGGAACTGTGGATTTACGACTGCGGGTAATAATCCGA
GATGCAGAGAATTAACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGAT
AGATACTCGTCCTCAAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGA
TAAGTCGAGTGGATTTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTAC
TTGTTGAATGAAGCTGATGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCT
CAGAGCCAAAGGAGAAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGA
TGATAAAGTATGCTGCGAAGGTGGAAGGGCTGGGTGATGCAGTTGACATT
GTGGGTACAGGAGGTGATGGTGCAAACACAGTGAACATTTCAACTGGTGC
TTCAATTCTTGCCGCAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTC
GGTCTAGTTCTTCTGCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGT
GTCGTTATTGACTTGGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGC
AGGAATTGGTTTCATGATGTCGACAAAGTATCACCCTGCAATGAAGTTTG
TCAGGCCAGTGAGGAAAAAGCTCAAAGTAAAAACTGTATTCAATATATTG
GGTCCTAT
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