CN186080

Overview
NameCN186080
Unique NameCN186080
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length708
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig378 contig Csv1_Contig378:145..851. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_CORGB (Anthranilate phosphoribosyltransferase OS=Corynebacterium glutamicum (strain R) GN=trpD PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.328e-24
Identity = 61/153 (39.87%), Postives = 90/153 (58.82%), Query Frame = 2
Query:  254 LNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAK--VEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            + E D+  I+A L  +R +GE F +I G A+A +  A    + G G  +D  GTGGDGANT+NI+TGAS++AA+ G K+ K             DVLEAL + + LD +   +  + +   F+ +  Y+PA+  V+PVR+ LK  T+FN LGP
Sbjct:   33 VGEYDDVHIAALLATIRTRGEQFADIAGAAKAFLAAARPFPITGAG-LLDSAGTGGDGANTINITTGASLIAASGGVKLVKHGNRSVSSKSGSADVLEALNIPLGLDVDRAVKWFEASNFTFLFAPAYNPAIAHVQPVRQALKFPTIFNTLGP 184          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_CHLP8 (Anthranilate phosphoribosyltransferase OS=Chlorobaculum parvum (strain NCIB 8327) GN=trpD PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.328e-24
Identity = 65/176 (36.93%), Postives = 92/176 (52.27%), Query Frame = 2
Query:  182 ELIDCLISRVDLTEAEAQASLDYLL-NEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            ELI  L++  DL+  E +A +D ++ N   +A   A L LL+ KG T  E +G    ++     +     AVD  GTGGD   T NIST A+ +AA  G  +AK             DVLEALG  +DL          E G  F+ +  YHP+MK V  +R++L ++T+FN+LGP
Sbjct:    5 ELIQKLLAGADLSAQEMEACIDSIMENRFTDAGTGAILALLQKKGVTPTEAIGAYENLMTRVTPITLPAHAVDTCGTGGDHRGTFNISTAAAFIAAGAGVPIAKHGNRSITSKCGSADVLEALGYRVDLPASATEEQFRETGFAFLFAPLYHPSMKAVASIRRELGIRTLFNLLGP 180          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_SULAC (Anthranilate phosphoribosyltransferase OS=Sulfolobus acidocaldarius GN=trpD PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.040e-24
Identity = 69/166 (41.57%), Postives = 95/166 (57.23%), Query Frame = 2
Query:  212 DLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            DL+  +++A  + L+  E  E  +SA L  L  KGE+F EIVG ARAM   A K+    +A+D  GTGGDG  T+N+ST  +I+ +     VAK             DVLEALG  I++ PE   + + E    F+ +  YHPAMK V  VRK L ++T+FN+LGP
Sbjct:   10 DLSTEDSEAIANALMKGEIPEIQVSALLTSLAMKGESFEEIVGFARAMRNNAIKIS-YPEALDTAGTGGDGLGTINVSTITAIILSQL-FPVAKHGNRSVSGKSGSADVLEALGYNINIAPELANKLIKENNFVFLFAQIYHPAMKNVANVRKTLGIRTIFNLLGP 173          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_HAES2 (Anthranilate phosphoribosyltransferase OS=Haemophilus somnus (strain 2336) GN=trpD PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.040e-24
Identity = 67/177 (37.85%), Postives = 95/177 (53.67%), Query Frame = 2
Query:  182 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLG-DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            +LI  L     L + + Q    Y++  +     ++  L+ L+ +GE   EI G  +A+I  A     +     DIVGTGGD ANT+NIST A+I+AA  G KV K             DVL ALG+ IDL  E  ++ +D   + F+ + +YH   K V PVR+ LK +T+FNILGP
Sbjct:    5 QLISQLFDGQHLNQEQIQQLFHYIIQGQLSNEQLAGVLIALKFRGEQTDEISGAVKAIIANAKPFPFIDYPFADIVGTGGDNANTINISTTAAIVAATLGYKVVKHGNRSVSSKSGASDVLNALGIKIDLSAEKSKQALDNLNLCFLWAQQYHLGFKHVAPVRQILKTRTIFNILGP 181          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_FRATN (Anthranilate phosphoribosyltransferase OS=Francisella tularensis subsp. novicida (strain U112) GN=trpD PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.040e-24
Identity = 64/176 (36.36%), Postives = 98/176 (55.68%), Query Frame = 2
Query:  185 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGL-GDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            ++D L +  DL+  E+    DY +  + +  L ++ L  L+ K ET  EI     A++    +   + GD   IVGTGGDG NT+NIST A+I+AA  G KVAK             D+LE+ GV I+L P+  ++C++   +GF+ +  Y    +++R  R  LK +T+FNILGP
Sbjct:    7 IVDKLYNLEDLSYQESYQLFDYFIKGQIELPLQTSILTALKLKKETSIEIASAVEALLDNTKEFPKIKGDLAGIVGTGGDGFNTINISTTAAIVAATAGYKVAKHGGRSVSSKSGSFDLLESFGVNIELAPDQTKQCLELYNLGFLFAPFYSEGFRYIREARAILKTRTIFNILGP 182          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_CALS8 (Anthranilate phosphoribosyltransferase OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=trpD PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.040e-24
Identity = 67/177 (37.85%), Postives = 94/177 (53.11%), Query Frame = 2
Query:  182 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGD-AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            E ++ + ++ DL   + +  LD +L  E DE    AFL  L+ KGET  EI     A  + A K+E      +D  GTGGDG  T NIST ++I+ +    KVAK             D+LE LG+ I   P+ +   +++    F+ + KYHPA K V  VRK L ++TVFNILGP
Sbjct:    4 EALEVVTAKRDLDYGQVKNLLDSILEGELDEMKFGAFLAALKTKGETKEEISAFVDAFYEKAQKIEYTHPKTIDTCGTGGDGKGTFNISTASAIVLSCFDLKVAKHGNRSITSNSGSADILENLGIDIQAPPQRILEGLEKHNFAFLFAPKYHPATKKVATVRKSLGIRTVFNILGP 180          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_PETMO (Anthranilate phosphoribosyltransferase OS=Petrotoga mobilis (strain DSM 10674 / SJ95) GN=trpD PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.970e-24
Identity = 63/179 (35.20%), Postives = 95/179 (53.07%), Query Frame = 2
Query:  176 FNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVE-GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            FN  +  ++   +L+  E + +++ ++  +   + +S FLV L  KGET  EI   A+ M + A  +    G+ +D  GTGGD   T NIST  + + AA G  VAK             DVLE+LG+ I L P  V RC+ E  I F+ +  +H A K     RK+L ++T+FN+LGP
Sbjct:    2 FNYYLQKVVKGENLSLDEMEQAMEMIMEGKVTHSQLSGFLVALHMKGETVEEITASAKVMKEKATPISIESGELMDTCGTGGDAKGTFNISTAVAFILAAAGVVVAKHGNRSVSSKSGSADVLESLGINISLPPSSVERCLKEINIAFLFAQDFHKATKHAAVPRKELGIRTIFNVLGP 180          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_METS5 (Anthranilate phosphoribosyltransferase OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=trpD PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.970e-24
Identity = 67/176 (38.07%), Postives = 100/176 (56.82%), Query Frame = 2
Query:  182 ELIDCLISRVDLTEAEAQASLDYLLNEA-DEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            E++  L   V L++ EA+   D ++  +  E L++  LV L+ KGET  EI+G   +M ++A K++ L + +D  GTGGDG  T+N+ST A+ LA +    VAK             D LE+LG  I + PE  +  +      F+ +  YHP+MK V PVRK L V+T+FN+LGP
Sbjct:    5 EVLKRLTEGVSLSQEEAKELADLIMEGSIPEPLVAGILVALKMKGETPDEIIGFVNSMRQHALKLD-LRNTLDTAGTGGDGIGTINVST-ATALAVSSVFPVAKHGNRAASSRSGSADFLESLGYNIQVPPEKAKDLLSRNNFVFLFAQLYHPSMKNVAPVRKVLGVRTIFNLLGP 178          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_IDILO (Anthranilate phosphoribosyltransferase OS=Idiomarina loihiensis GN=trpD PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.970e-24
Identity = 65/176 (36.93%), Postives = 101/176 (57.39%), Query Frame = 2
Query:  188 IDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDA--VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            +  L+S   LT+ + +     L+  E ++  +SA L+ ++ +GET  E+ G A A++  AAK     D   +D  GTGGDG+NT+NIST A+++AA+ G  VAK             DVLEAL + ++LDP      + + G  F+ +  YHP +K   PVR+ LK +T+FN++GP
Sbjct:    4 LQTLMSGESLTQDQTREFFQRLIKGELNDIQVSAALIAMKMRGETPAELAGAAEAILS-AAKPFLRSDTTVIDSCGTGGDGSNTINISTTAALVAASMGLAVAKHGNRSVSSRSGSADVLEALKLRVNLDPSDASTQLADNGFCFLFAPHYHPGIKHAMPVRQTLKTRTLFNLIGP 178          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_GRAFK (Anthranilate phosphoribosyltransferase OS=Gramella forsetii (strain KT0803) GN=trpD PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.970e-24
Identity = 66/177 (37.29%), Postives = 99/177 (55.93%), Query Frame = 2
Query:  182 ELIDCLISRVDLTEAEA-QASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVE-GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            EL++ LIS   ++  EA Q   +    + ++  I+AFL +   +  T  E+ G   A+++   KV+    +AVD+ GTGGDG +T N+ST +S + A  G KVAK             +V+E LG+    D   + +C+D+A I  + +  +HPAMK V PVRK L VKT FN+LGP
Sbjct:    3 ELLNRLISHETISTDEAKQVIFNISEGKYNDTQIAAFLTVYMMRSITIEELEGFRDALLELCIKVDLSAYNAVDLCGTGGDGKDTFNVSTTSSFVTAGAGVKVAKHGNYGVSSVSGSSNVMEYLGIKFSSDAGFLEKCIDQANICILHAPLFHPAMKNVGPVRKSLAVKTFFNMLGP 179          
The following BLAST results are available for this feature:
BLAST of CN186080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_CORGB2.328e-2439.87Anthranilate phosphoribosyltransferase OS=Coryneba... [more]
TRPD_CHLP82.328e-2436.93Anthranilate phosphoribosyltransferase OS=Chloroba... [more]
TRPD_SULAC3.040e-2441.57Anthranilate phosphoribosyltransferase OS=Sulfolob... [more]
TRPD_HAES23.040e-2437.85Anthranilate phosphoribosyltransferase OS=Haemophi... [more]
TRPD_FRATN3.040e-2436.36Anthranilate phosphoribosyltransferase OS=Francise... [more]
TRPD_CALS83.040e-2437.85Anthranilate phosphoribosyltransferase OS=Caldicel... [more]
TRPD_PETMO3.970e-2435.20Anthranilate phosphoribosyltransferase OS=Petrotog... [more]
TRPD_METS53.970e-2438.07Anthranilate phosphoribosyltransferase OS=Metallos... [more]
TRPD_IDILO3.970e-2436.93Anthranilate phosphoribosyltransferase OS=Idiomari... [more]
TRPD_GRAFK3.970e-2437.29Anthranilate phosphoribosyltransferase OS=Gramella... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002F09_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186080 ID=CN186080; Name=CN186080; organism=Citrus sinensis; type=EST; length=708bp
AGGGTTTCTTCCTCTCCATTTAATAATAATCACCCAAACCACCGGCCTTT
CTTACCGTCGCTTGGGAACTGTGGATTTACGACTGCGGGTAATAATCCGA
GATGCAGAGAATTAACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGAT
AGATACTCGTCCTCAAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGA
TAAGTCGAGTGGATTTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTAC
TTGTTGAATGAAGCTGATGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCT
CAGAGCCAAAGGAGAAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGA
TGATAAAGTATGCTGCGAAGGTGGAAGGGCTGGGTGATGCAGTTGACATT
GTGGGTACAGGAGGTGATGGTGCAAACACAGTGAACATTTCAACTGGTGC
TTCAATTCTTGCCGCAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTC
GGTCTAGTTCTTCTGCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGT
GTCGTTATTGACTTGGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGC
AGGAATTGGTTTCATGATGTCGACAAAGTATCACCCTGCAATGAAGTTTG
TCAGGCCAGTGAGGAAAAAGCTCAAAGTAAAAACTGTATTCAATATATTG
GGTCCTAT
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