CN186080

Overview
NameCN186080
Unique NameCN186080
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length708
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig378 contig Csv1_Contig378:145..851. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_PROMT (Anthranilate phosphoribosyltransferase OS=Prochlorococcus marinus (strain NATL2A) GN=trpD PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.186e-24
Identity = 64/180 (35.56%), Postives = 102/180 (56.67%), Query Frame = 2
Query:  176 FNELIDCLISRVDLTEAEAQASLD-YLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLG--DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            F  +++ L++  DLTE ++   ++ +L N+ +     AFL   RAKG +  E+  +A+ +   +     L   D VD  GTGGDGANT NISTG + ++AA G K+AK             DVLE LG+ +++    V   + + GI F+ +  +HP++  + P+RK L V+T+FN+LGP
Sbjct:    9 FPVILESLLASNDLTEEQSNYLMNSWLDNKIEPVQTGAFLAAFRAKGVSGDELSAMAKILQDASTTPSDLPSFDLVDTCGTGGDGANTFNISTGVAFVSAALGVKIAKHGNRSASGKVGSADVLENLGLPLNVSSGKVVEALKKLGITFLFAPSWHPSLVNLAPLRKSLGVRTIFNLLGP 188          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_HELPY (Anthranilate phosphoribosyltransferase OS=Helicobacter pylori GN=trpD PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.186e-24
Identity = 62/177 (35.03%), Postives = 98/177 (55.37%), Query Frame = 2
Query:  182 ELIDCLISRVDLTEAEAQASLDYLLNE-ADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLG-DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            E+++ L  + DL + E +     +++E      + A L  L+ KGE+F EI   A  ++++A K    G D +D  GTGGDG  T+NIST A+++A++ G  +AK             D+LE LGV I+++P  +  C  +   GF+ +  YH + K   P+RK+L  KT+FN LGP
Sbjct:    3 EILNALYHQKDLNDEEVKKLFTLIIHEKVSPVQLGAILCALKIKGESFKEISVAATTLLEHAPKPFNSGLDLIDNCGTGGDGLKTINISTIAALIASSMGLSMAKHGSRSVSSHSGSADLLENLGVNIEMNPTQLENCFKQTHFGFLFAPLYHQSFKKSAPLRKELFTKTIFNCLGP 179          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_HELPJ (Anthranilate phosphoribosyltransferase OS=Helicobacter pylori J99 GN=trpD PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.186e-24
Identity = 62/177 (35.03%), Postives = 100/177 (56.50%), Query Frame = 2
Query:  182 ELIDCLISRVDLTEAEAQASLDYLLNE-ADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLG-DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            ++++ L  + DL + E +     +++E    A + A L  L+ KGE+F EI   A  ++++A K    G D +D  GTGGDG  T+NIST A+++A++ G  +AK             D+LE LGV I+++P  +  C  ++  GF+ +  YH + K   P+RK+L  KT+FN LGP
Sbjct:    3 DILNALYHQKDLNDEEVKKLFTLIIDEKVSPAQLGAVLCALKIKGESFKEISVAATTLLEHAPKPFNSGLDLIDNCGTGGDGLKTINISTIAALIASSMGLSMAKHGSRSVSSHSGSADLLENLGVNIEMNPMQLENCFKQSHFGFLFAPLYHQSFKKSAPLRKELFTKTIFNCLGP 179          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_GEOTN (Anthranilate phosphoribosyltransferase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=trpD PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.186e-24
Identity = 61/165 (36.97%), Postives = 93/165 (56.36%), Query Frame = 2
Query:  215 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            LTE EA  ++  +++  A ++ I++ L +L  +GET  E+ G  RAM      ++   D +D  GTGGDGA T NIST A+I+ ++ G KVAK             DVLE LG+ I   P+  +  ++  G+ F+ +  YH AMK     RK++  +TVFN++GP
Sbjct:   15 LTEEEAYEAMATVMDGAATDSQIASLLSMLCLRGETVDELTGFVRAMRDRMMAIDAGDDVIDTCGTGGDGAATFNISTAAAIVISSLGVKVAKHGNRAVSSKSGSADVLERLGINIQSSPDAAKEALETNGLTFLYAPLYHTAMKHAAGPRKEIGFRTVFNLIGP 179          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_ERYLH (Anthranilate phosphoribosyltransferase OS=Erythrobacter litoralis (strain HTCC2594) GN=trpD PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.186e-24
Identity = 61/165 (36.97%), Postives = 95/165 (57.58%), Query Frame = 2
Query:  215 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            +++ EA+    ++L+ EA E  I+ FL+ +  + ET  EI G ARA+      VE    AVD  GTGGDG +T+N+ST  S++ AA G  VAK             D LEALG+ ++       + + E GI F+ +  +HPAM  ++P+R++L  +T+FN++GP
Sbjct:   11 MSQDEAEEVFGWILDGEASEEEIARFLLAMTERSETADEIAGAARALRDRLIPVEAPEGAVDCCGTGGDGHHTLNVSTAVSLVVAAAGVPVAKHGNRAASSKSGAADTLEALGLDMEAVGRTAEKTLAEIGICFLFAKNHHPAMGRIQPIRQRLGKRTIFNLMGP 175          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_CLAM3 (Anthranilate phosphoribosyltransferase OS=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) GN=trpD PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.773e-24
Identity = 69/184 (37.50%), Postives = 99/184 (53.80%), Query Frame = 2
Query:  161 PQTPCFNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTV-NISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            P  P +  LI  LI    L+ +E+  ++  ++  EA  A +   LV LRA GET  EIVG   A+++ A  ++    A+DIVGTGGD    V NIS+ AS++AAA G  V K             DVL ALGV + + PE V   + E GI +  +  +HP  +     R++L + T+FN+LGP
Sbjct:    2 PSAPTWPALITTLIEGRHLSVSESTWAMRQVMRGEATPAQLGGLLVALRASGETVDEIVGFRDAVLEEALPLDADPRALDIVGTGGDPYGAVLNISSVASVIAAAAGVPVIKHGNRGASSASGASDVLTALGVDLSITPERVAEVLRETGITYAHAALFHPGFRHAAATRRELGISTLFNVLGP 185          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_LISW6 (Anthranilate phosphoribosyltransferase OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=trpD PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.845e-24
Identity = 66/179 (36.87%), Postives = 101/179 (56.42%), Query Frame = 2
Query:  188 IDCLISRVDLTEAEAQASLDYLLNEADEALIS-----AFLVLLRAKGETFGEIVGLARAMIKYAAKVE-GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            ++ L+ +V   E   +A ++ L  E  E  +S     AFL+ L+ KGET  E+ G+A AM + A +V    G A+D  GTGGD +N+ NIST ++ + AA G  VAK             DV + LG+ I++ PE +   +++ GI F+ +   HP MK+V  VRK+L   T+FN++GP
Sbjct:    1 MESLLQKVYDQENLTKAEMNILATEIFEGRLSKTKMAAFLMALKVKGETAEEMAGIAEAMQEVAIQVAFPAGTAMDNCGTGGDKSNSFNISTTSAFVLAAAGIPVAKHGNRSISSRSGSADVCQELGIDINMRPEDMTYLLEKVGIAFLFAPHVHPNMKYVMDVRKELGTPTIFNLIGP 179          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_VESOH (Anthranilate phosphoribosyltransferase OS=Vesicomyosocius okutanii subsp. Calyptogena okutanii (strain HA) GN=trpD PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.155e-23
Identity = 61/178 (34.27%), Postives = 96/178 (53.93%), Query Frame = 2
Query:  182 ELIDCLISRVDLTEAEAQASL-DYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKV--EGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            + I  ++ + DL++ E Q  + D +  +  +   S FLV L  KGE+  EI  + + +  +   V  +     VD  GTGGDG    NIST  + + AA G  VAK             DVL+A GV +++  E + +C+++ GIGFM +  +H ++K+   VRK L +KT+FNI+GP
Sbjct:    5 QAIKQIVKKQDLSQNEMQKVMNDIMTGKTTDTQTSGFLVGLAIKGESIDEITAVVKIIRSFTKSVTIKNTKHLVDTCGTGGDGLGLFNISTACAFVVAAAGGSVAKHGNRGISSKSGSADVLKAAGVNLNMSVERISKCIEKIGIGFMFAPFHHHSIKYTTNVRKDLAIKTIFNIVGP 182          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_LISIN (Anthranilate phosphoribosyltransferase OS=Listeria innocua GN=trpD PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.155e-23
Identity = 63/176 (35.80%), Postives = 101/176 (57.39%), Query Frame = 2
Query:  185 LIDCLISRVDLTEAEAQ-ASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVE-GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            L+  +  + +L++AE    + +       +  I+AFL+ L+ KGET  E+ G+A AM + A +V+   G A+D  GTGGD +N+ NIST ++ + AA G  VAK             DV + LG+ I++ PE +   +++ GI F+ +   HP MK+V  VRK+L   T+FN++GP
Sbjct:    4 LLQKVYDQKNLSKAEMNIVATEIFEGRLSKTKIAAFLMALKVKGETAEEMAGIAEAMQQVAIQVDFPAGTAMDNCGTGGDKSNSFNISTTSAFVLAAAGIPVAKHGNRSISSRSGSADVCQELGIDINMRPEDMTYLLEKVGIAFLFAPHVHPNMKYVMDVRKELGTPTIFNLIGP 179          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_HELAH (Anthranilate phosphoribosyltransferase OS=Helicobacter acinonychis (strain Sheeba) GN=trpD PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.155e-23
Identity = 61/176 (34.66%), Postives = 98/176 (55.68%), Query Frame = 2
Query:  185 LIDCLISRVDLTEAEAQASLDYLLNE-ADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLG-DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            +++ L  + DL + E +    +++NE      + A L  L+ KGE+  EI   A  ++++A K    G D +D  GTGGDG  T+NIST A+++A++ G  +AK             D+LE LGV I+++   +  C+ E+  GF+ +  YH + K   P+RK+L  KT+FN LGP
Sbjct:    4 ILNALYHQKDLNDEEVKRLFTFIINEEVSPTQLGAILCALKIKGESLSEISAAATTLLEHAPKPFKSGLDLIDNCGTGGDGLKTINISTIAALIASSMGLPMAKHGSRSVSSHSGSADLLENLGVNIEMNRAQLENCLKESHFGFLFAPLYHQSFKKSAPLRKELFTKTIFNCLGP 179          
The following BLAST results are available for this feature:
BLAST of CN186080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_PROMT5.186e-2435.56Anthranilate phosphoribosyltransferase OS=Prochlor... [more]
TRPD_HELPY5.186e-2435.03Anthranilate phosphoribosyltransferase OS=Helicoba... [more]
TRPD_HELPJ5.186e-2435.03Anthranilate phosphoribosyltransferase OS=Helicoba... [more]
TRPD_GEOTN5.186e-2436.97Anthranilate phosphoribosyltransferase OS=Geobacil... [more]
TRPD_ERYLH5.186e-2436.97Anthranilate phosphoribosyltransferase OS=Erythrob... [more]
TRPD_CLAM36.773e-2437.50Anthranilate phosphoribosyltransferase OS=Clavibac... [more]
TRPD_LISW68.845e-2436.87Anthranilate phosphoribosyltransferase OS=Listeria... [more]
TRPD_VESOH1.155e-2334.27Anthranilate phosphoribosyltransferase OS=Vesicomy... [more]
TRPD_LISIN1.155e-2335.80Anthranilate phosphoribosyltransferase OS=Listeria... [more]
TRPD_HELAH1.155e-2334.66Anthranilate phosphoribosyltransferase OS=Helicoba... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002F09_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186080 ID=CN186080; Name=CN186080; organism=Citrus sinensis; type=EST; length=708bp
AGGGTTTCTTCCTCTCCATTTAATAATAATCACCCAAACCACCGGCCTTT
CTTACCGTCGCTTGGGAACTGTGGATTTACGACTGCGGGTAATAATCCGA
GATGCAGAGAATTAACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGAT
AGATACTCGTCCTCAAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGA
TAAGTCGAGTGGATTTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTAC
TTGTTGAATGAAGCTGATGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCT
CAGAGCCAAAGGAGAAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGA
TGATAAAGTATGCTGCGAAGGTGGAAGGGCTGGGTGATGCAGTTGACATT
GTGGGTACAGGAGGTGATGGTGCAAACACAGTGAACATTTCAACTGGTGC
TTCAATTCTTGCCGCAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTC
GGTCTAGTTCTTCTGCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGT
GTCGTTATTGACTTGGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGC
AGGAATTGGTTTCATGATGTCGACAAAGTATCACCCTGCAATGAAGTTTG
TCAGGCCAGTGAGGAAAAAGCTCAAAGTAAAAACTGTATTCAATATATTG
GGTCCTAT
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