CN186080

Overview
NameCN186080
Unique NameCN186080
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length708
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig378 contig Csv1_Contig378:145..851. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_PROMH (Anthranilate phosphoribosyltransferase OS=Proteus mirabilis (strain HI4320) GN=trpD PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.509e-23
Identity = 62/172 (36.05%), Postives = 97/172 (56.40%), Query Frame = 2
Query:  197 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAV-DIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            L +   L+  E+Q     ++  E  E+ ++A L+ ++ +GE   EI G ARA++  A+          DIVGTGGDGAN++NIST ++ +AA  G KVAK             D+L A G+ +D      R+ +DE G+ F+ +  YH   +F  PVR++L+ +T+FN+LGP
Sbjct:    8 LFAGQQLSLEESQTLFSAIIRGELTESQLAAVLISMKMRGEHPQEIAGAARALLDNASPFPRPDYLFCDIVGTGGDGANSINISTASAFVAAEIGLKVAKHGNRSVSSRSGSSDLLAAFGIPLDKSANDARQLLDEIGLCFLFAPLYHSGFRFAAPVRQQLRTRTLFNVLGP 179          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_PELLD (Anthranilate phosphoribosyltransferase OS=Pelodictyon luteolum (strain DSM 273) GN=trpD PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.509e-23
Identity = 65/177 (36.72%), Postives = 96/177 (54.24%), Query Frame = 2
Query:  182 ELIDCLISRVDLTEAEAQASLDYLLNE--ADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            EL++ L +   LT  E +  +D ++    ++EA+I A L L++  G T   + G   ++++ A  ++    AVD  GTGGD A T NIST A+I+A A G  +AK             DVLE LG  I+L PE         G  ++ +  YHP+MK V  +RKK+  +T+FNILGP
Sbjct:    5 ELLEKLQAGQQLTYDETKRCMDGIMAGLFSEEAII-ALLTLMQDNGITADAVAGARESIMQRATPIQLDERAVDTCGTGGDSAGTFNISTAAAIIANAAGVSIAKHGNRAVTSRCGSADVLEELGFCIELPPEATEELYGRTGFAYLHAPLYHPSMKAVAAIRKKIGTRTIFNILGP 180          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_PASMU (Anthranilate phosphoribosyltransferase OS=Pasteurella multocida GN=trpD PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.509e-23
Identity = 63/151 (41.72%), Postives = 91/151 (60.26%), Query Frame = 2
Query:  260 EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDA--VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            + D + +SA L+ L+ +GET  EI G   A+ +  A+   + D    DIVGTGGDGANT+NIST ++I+AA+ G KVAK             D+L ALGV + +     R+ +DE G+ F+ + +YH   +   PVR+ LK +T+FNILGP
Sbjct:   32 QLDNSQLSAALIALKLRGETPEEISGAVTAL-QADAESFPIPDYPFADIVGTGGDGANTINISTASAIVAASYGLKVAKHGNRSVSSQTGASDLLTALGVNVHISAHKARQALDEIGLCFLFAPQYHLGFQHAIPVRQALKTRTIFNILGP 181          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_HELPG (Anthranilate phosphoribosyltransferase OS=Helicobacter pylori (strain G27) GN=trpD PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.509e-23
Identity = 61/177 (34.46%), Postives = 98/177 (55.37%), Query Frame = 2
Query:  182 ELIDCLISRVDLTEAEAQASLDYLLNE-ADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLG-DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            ++++ L  + DL + E +     +++E      + A L  L+ KGE+F EI   A  ++++A K    G D +D  GTGGDG  T+NIST A+++A++ G  +AK             D+LE LGV I+++P  +  C  +   GF+ +  YH + K   P+RK+L  KT+FN LGP
Sbjct:    3 DILNALYHQKDLNDGEVKKLFTLIIHEKVSPVQLGAILCALKIKGESFKEISVAATTLLEHAPKPFNSGLDLIDNCGTGGDGLKTINISTIAALIASSMGLPMAKHGSRSVSSHSGSADLLENLGVNIEMNPMQLENCFKQTHFGFLFAPLYHQSFKKSAPLRKELFTKTIFNCLGP 179          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_FRATO (Anthranilate phosphoribosyltransferase OS=Francisella tularensis subsp. holarctica (strain OSU18) GN=trpD PE=3 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 1.509e-23
Identity = 63/176 (35.80%), Postives = 97/176 (55.11%), Query Frame = 2
Query:  185 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGL-GDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            ++D L +  DL+  E+    DY +  + +  L ++ L+ L+ K ET  EI     A+     +   + GD   IVGTGGDG NT+NIST A+I+AA  G KVAK             D+LE+ GV I+L P+  ++C++   +GF+ +  Y    + ++  R  LK +T+FNILGP
Sbjct:    7 IVDKLYNLEDLSYQESYQLFDYFIKGQIELPLQTSILIALKLKKETSIEIAAAVEALFDNTKEFPKIKGDLAGIVGTGGDGFNTINISTTAAIVAATAGYKVAKHGGRSVSSKSGSFDLLESFGVNIELAPDQTKQCLELYNLGFLFAPFYSDGFRHIKEARTILKTRTIFNILGP 182          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_THEEB (Anthranilate phosphoribosyltransferase OS=Thermosynechococcus elongatus (strain BP-1) GN=trpD PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.971e-23
Identity = 71/181 (39.23%), Postives = 100/181 (55.25%), Query Frame = 2
Query:  176 FNELIDCLISRVDLTEAEA-QASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVE-GLGDA-VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGV-VIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            +++L+  L+ R  LT+ +A Q    +L  E  +AL  A L  L+ KG T  E+ G+A  ++  +A     L +  +D  GTGGD A T NIST  + + AA G KVAK             DVLE LGV +   DP  +   + E GI F+ +  +HPAMK V P+R+ LK +TVFN+LGP
Sbjct:    2 WSDLLQQLLDRQALTQEQAAQLMQGWLAEEIPDALSGAILTALQLKGLTVEELTGMANVLLAQSAGAPLNLAEPLIDTCGTGGDRAGTFNISTAVAFVVAAAGVKVAKHGNRSVSSRVGSADVLETLGVNLAHSDPAFL---LKEVGITFLFAPGWHPAMKAVAPLRRTLKTRTVFNLLGP 179          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_LISMO (Anthranilate phosphoribosyltransferase OS=Listeria monocytogenes GN=trpD PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.971e-23
Identity = 65/179 (36.31%), Postives = 102/179 (56.98%), Query Frame = 2
Query:  188 IDCLISRVDLTEAEAQASLDYLLNEADEALIS-----AFLVLLRAKGETFGEIVGLARAMIKYAAKVE-GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            ++ L+ +V   E  ++  ++ +  E  E  +S     AFL+ L+ KGET  E+ G+A+AM + A +V    G A+D  GTGGD +N+ NIST ++ + AA G  VAK             DV + LG+ I+L PE +   +++ GI F+ +   HP MK+V  VRK+L   T+FN++GP
Sbjct:    1 MEILLQKVYDQENLSKEEMNIIATEIFEGRLSKTKMAAFLMALKVKGETAEEMAGIAQAMQQVAIQVAFPAGTAMDNCGTGGDKSNSFNISTTSAFVLAAAGIPVAKHGNRSISSRSGSADVCQELGIDINLRPEDMTYLLEKVGIAFLFAPHVHPNMKYVMDVRKELGTPTIFNLIGP 179          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_LISMF (Anthranilate phosphoribosyltransferase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=trpD PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.971e-23
Identity = 59/144 (40.97%), Postives = 88/144 (61.11%), Query Frame = 2
Query:  278 ISAFLVLLRAKGETFGEIVGLARAMIKYAAKVE-GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            I+AFL+ L+ KGET  E+ G+A+AM + A +V    G A+D  GTGGD +N+ NIST ++ + AA G  VAK             DV + LG+ I++ PE +   +++ GI F+ +   HP MK+V  VRK+L   T+FN++GP
Sbjct:   36 IAAFLMALKVKGETAEEMAGIAQAMQRVAIQVAFPAGTAMDNCGTGGDKSNSFNISTTSAFVLAAAGIPVAKHGNRSISSRSGSADVCQELGIDINMRPEDMTYLLEKVGIAFLFAPHVHPNMKYVMDVRKELGTPTIFNLIGP 179          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_LISMC (Anthranilate phosphoribosyltransferase OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=trpD PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.971e-23
Identity = 59/144 (40.97%), Postives = 88/144 (61.11%), Query Frame = 2
Query:  278 ISAFLVLLRAKGETFGEIVGLARAMIKYAAKVE-GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            I+AFL+ L+ KGET  E+ G+A+AM + A +V    G A+D  GTGGD +N+ NIST ++ + AA G  VAK             DV + LG+ I++ PE +   +++ GI F+ +   HP MK+V  VRK+L   T+FN++GP
Sbjct:   36 IAAFLMALKVKGETAEEMAGIAQAMQRVAIQVAFPAGTAMDNCGTGGDKSNSFNISTTSAFVLAAAGIPVAKHGNRSISSRSGSADVCQELGIDINMRPEDMTYLLEKVGIAFLFAPHVHPNMKYVMDVRKELGTPTIFNLIGP 179          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_FRATF (Anthranilate phosphoribosyltransferase OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=trpD PE=3 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 1.971e-23
Identity = 63/176 (35.80%), Postives = 97/176 (55.11%), Query Frame = 2
Query:  185 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGL-GDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            ++D L +  DL+  E+    DY +  + +  L ++ L+ L+ K ET  EI     A+     +   + GD   IVGTGGDG NT+NIST A+I+AA  G KVAK             D+LE+ GV I+L P+  ++C++   +GF+ +  Y    + ++  R  LK +T+FNILGP
Sbjct:    7 IVDKLYNLEDLSYQESYQLFDYFIKGQIELPLQTSILIALKLKKETSIEIAAAVEALFDNTKEFPKIKGDLAGIVGTGGDGFNTINISTTAAIVAATAGYKVAKHGGRSVSSKSGSFDLLESFGVNIELAPDQTKQCLELYNMGFLFAPFYSDGFRHIKEARTILKTRTIFNILGP 182          
The following BLAST results are available for this feature:
BLAST of CN186080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_PROMH1.509e-2336.05Anthranilate phosphoribosyltransferase OS=Proteus ... [more]
TRPD_PELLD1.509e-2336.72Anthranilate phosphoribosyltransferase OS=Pelodict... [more]
TRPD_PASMU1.509e-2341.72Anthranilate phosphoribosyltransferase OS=Pasteure... [more]
TRPD_HELPG1.509e-2334.46Anthranilate phosphoribosyltransferase OS=Helicoba... [more]
TRPD_FRATO1.509e-2335.80Anthranilate phosphoribosyltransferase OS=Francise... [more]
TRPD_THEEB1.971e-2339.23Anthranilate phosphoribosyltransferase OS=Thermosy... [more]
TRPD_LISMO1.971e-2336.31Anthranilate phosphoribosyltransferase OS=Listeria... [more]
TRPD_LISMF1.971e-2340.97Anthranilate phosphoribosyltransferase OS=Listeria... [more]
TRPD_LISMC1.971e-2340.97Anthranilate phosphoribosyltransferase OS=Listeria... [more]
TRPD_FRATF1.971e-2335.80Anthranilate phosphoribosyltransferase OS=Francise... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002F09_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186080 ID=CN186080; Name=CN186080; organism=Citrus sinensis; type=EST; length=708bp
AGGGTTTCTTCCTCTCCATTTAATAATAATCACCCAAACCACCGGCCTTT
CTTACCGTCGCTTGGGAACTGTGGATTTACGACTGCGGGTAATAATCCGA
GATGCAGAGAATTAACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGAT
AGATACTCGTCCTCAAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGA
TAAGTCGAGTGGATTTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTAC
TTGTTGAATGAAGCTGATGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCT
CAGAGCCAAAGGAGAAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGA
TGATAAAGTATGCTGCGAAGGTGGAAGGGCTGGGTGATGCAGTTGACATT
GTGGGTACAGGAGGTGATGGTGCAAACACAGTGAACATTTCAACTGGTGC
TTCAATTCTTGCCGCAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTC
GGTCTAGTTCTTCTGCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGT
GTCGTTATTGACTTGGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGC
AGGAATTGGTTTCATGATGTCGACAAAGTATCACCCTGCAATGAAGTTTG
TCAGGCCAGTGAGGAAAAAGCTCAAAGTAAAAACTGTATTCAATATATTG
GGTCCTAT
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