CN186080

Overview
NameCN186080
Unique NameCN186080
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length708
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_CALMQ (Anthranilate phosphoribosyltransferase OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=trpD PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.733e-23
Identity = 66/177 (37.29%), Postives = 100/177 (56.50%), Query Frame = 2
Query:  185 LIDCLISRVDLTEAEA-QASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGD--AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            L++ +   ++L+  EA  A+L  L  EA EA  +A L+ LR +GE   E+ G A+A+ +   ++  + D   +D  GTGGDG  T+N+ST +++LAA  G KV K             D LEALG  I + PE     ++     F  +  YHPAMK V PVR++L ++T+FN++GP
Sbjct:    4 LLEKIARGLELSLEEAYNAALAILKMEAGEAETAALLMGLRVRGERAFEVAGFAKALRETCLRIP-VNDPYVIDTAGTGGDGLRTMNVSTISALLAAYLGVKVLKHGNRSVSSSSGSADFLEALGFNISVKPETALLMLNNHRFSFAFAPMYHPAMKNVMPVRRRLGIRTIFNLVGP 179          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_BACHD (Anthranilate phosphoribosyltransferase OS=Bacillus halodurans GN=trpD PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.733e-23
Identity = 62/166 (37.35%), Postives = 91/166 (54.82%), Query Frame = 2
Query:  215 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVE-GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            L E +A+  +D ++  EA  + I++ L +LR +GET  E+ G ARAM +++ ++E      VD  GTGGD   T NIST  ++L +A G  VAK             DVLEAL + I   PE     + +  + FM +  YH AMK     RK++  +T+FN+LGP
Sbjct:   15 LAERKAEQVMDAIMKGEATASQIASLLTVLRFRGETVAEMTGFARAMRRHSIQIEHSFSQVVDTCGTGGDDVGTFNISTATALLVSALGVPVAKHGNRAVSSKSGSADVLEALQIPIQSSPEEATASLQKHNMCFMFAPLYHVAMKHAVAPRKEIGFRTIFNLLGP 180          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_TRIEI (Anthranilate phosphoribosyltransferase OS=Trichodesmium erythraeum (strain IMS101) GN=trpD PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 7.488e-23
Identity = 67/185 (36.22%), Postives = 97/185 (52.43%), Query Frame = 2
Query:  185 LIDCLISRVDLTEAEAQASLD-YLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGD----------AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            L+  L+    L+ ++A   +  +L  E    L  A L  L+AKG +  E+ G+A+ +   +   E   +           +D  GTGGDGA+T NIST  + + AA G  VAK             DVLEALG+ ++   E V   + E GI F+ +  +HPAMK V P+R+ LKV+TVFN+LGP
Sbjct:   12 LLQQLLDGQSLSSSQASNLMQGWLQEEIPPVLSGAILAALQAKGVSAQELAGMAKVLQSLSLTKEYHNNNIPITNFQYPIIDTCGTGGDGASTFNISTAVAFVLAAAGVPVAKHGNRSASGKVGSADVLEALGIRLNAPTEKVISALSEVGITFLFAPGWHPAMKCVVPLRRTLKVRTVFNLLGP 196          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_PARDP (Anthranilate phosphoribosyltransferase OS=Paracoccus denitrificans (strain Pd 1222) GN=trpD PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 7.488e-23
Identity = 63/165 (38.18%), Postives = 86/165 (52.12%), Query Frame = 2
Query:  215 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            LT  EA+A+   L    A  A I   L+ +R +GET  E+    RAM     +++    A+DIVGTGGDG  T+NIST  + + A  G  VAK             D L  LG+ +   PE     +   GI FMM+  +HPAM+ V P R +L  +T+FN+LGP
Sbjct:   19 LTGTEAEAAFGALFEGAATPAQIGGLLMAMRVRGETVEEMAAATRAMRARMNRIKAPEGAMDIVGTGGDGKGTLNISTATAFVVAGAGVPVAKHGNRNLSSKSGSADALTHLGLNVMSTPEIAEAALAATGICFMMAPVHHPAMRHVGPARAELGTRTIFNLLGP 183          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_FRATW (Anthranilate phosphoribosyltransferase OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=trpD PE=3 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 7.488e-23
Identity = 63/176 (35.80%), Postives = 95/176 (53.98%), Query Frame = 2
Query:  185 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGL-GDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            ++D L +  DL+  E+    DY +  + +  L ++ L  L+ K ET  EI     A+     +   + GD   IVGTGGDG NT+NIST A+I+AA  G KVAK             D+LE+ GV I+L P+  ++C++   +GF+    Y    + ++  R  LK +T+FNILGP
Sbjct:    7 IVDKLYNLEDLSYQESYQLFDYFIKGQIELPLQTSILTALKLKKETSIEIAAAVEALFDNTKEFPKIKGDLAGIVGTGGDGFNTINISTTAAIVAATAGYKVAKHGGRSVSSKSGSFDLLESFGVNIELAPDQTKQCLELYNLGFLFVPFYSDGFRHIKEARTILKTRTIFNILGP 182          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_SODGM (Anthranilate phosphoribosyltransferase OS=Sodalis glossinidius (strain morsitans) GN=trpD PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.668e-22
Identity = 57/144 (39.58%), Postives = 85/144 (59.03%), Query Frame = 2
Query:  278 ISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDA-VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            ++A L+ ++ +GE   EI G A A++  A+          DIVGTGGDG+N++NIST ++I+AA CGA+VAK             D+L A G+ +D+     R+ +DE GI F+ + +YH       PVR+ LK  T+FN+LGP
Sbjct:   36 LAAALISMKVRGEYSEEIAGAASALLADASPFPRPDYTFADIVGTGGDGSNSINISTASAIVAAGCGARVAKHGNRSVSSCSGSSDLLAAFGIRLDMPAALSRQALDELGICFLFAPQYHSGFSHAMPVRQLLKTCTLFNVLGP 179          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_ANATD (Anthranilate phosphoribosyltransferase OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=trpD PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.668e-22
Identity = 64/177 (36.16%), Postives = 95/177 (53.67%), Query Frame = 2
Query:  182 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDA-VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            ++++ + ++ DL   + +  LD +L  E DE    AFL  L+ KGET  EI     A    A K+     A +D  GTGGDG  T NIST A+I+ +    KVAK             D+LE LG+ I  + + + + +++    F+ +  YHPAMK V  +R+ L ++TVFNILGP
Sbjct:    4 DVLELVTNKKDLEYDQVKNLLDNILEGELDEIKFGAFLAALKTKGETEKEISAFVDAFYDKAKKLNFDHPATIDTCGTGGDGKGTFNISTAAAIVLSCFDVKVAKHGNRSITSNSGSADILEKLGIDIQAEEDKILKGLEKLNFAFLFAPLYHPAMKKVANLRRSLGIRTVFNILGP 180          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_GLUOX (Anthranilate phosphoribosyltransferase OS=Gluconobacter oxydans GN=trpD PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.179e-22
Identity = 60/166 (36.14%), Postives = 91/166 (54.82%), Query Frame = 2
Query:  215 LTEAEAQASLDYLL-NEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGL-GDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            L   EA+ +   ++  E D   ++AFL  L+ +GETF E+ G  +A+  +   +  +   A+D+ GTGGDG  T+N+ST  + + A  G  VAK             DVLE LG+    D E   R + E G+ F+ + ++HPAM+   PVRK L  +T+FN+LGP
Sbjct:   20 LDSHEAETAFHAIMAGEVDPVQLAAFLTALKLRGETFAELTGAVQAVRHHMTVLPDVPAGAIDVCGTGGDGLKTLNVSTAVAFVLAGLGVPVAKHGNRALSSASGATDVLEVLGIPPTDDLELQGRRLREDGLVFLAAPQHHPAMRHAAPVRKALGFRTLFNLLGP 185          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_CHLL2 (Anthranilate phosphoribosyltransferase OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=trpD PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.179e-22
Identity = 63/171 (36.84%), Postives = 91/171 (53.22%), Query Frame = 2
Query:  197 LISRVDLTEAEAQASLDYLLNEA-DEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            L+S    ++ E    ++ ++N    + +I+A L LL  KG T  E+ G   ++I  A  ++   DAVD  GTGGD A T NIST  SI+A + G  +AK             DVLE LG  IDL  E         G  F+ +  +HP+MK V  +RK+L ++T+FN+LGP
Sbjct:   10 LLSGDHFSQEEMTQCMNAIMNGVFPDTVIAALLALLEHKGVTSTEVAGAYYSLIAKANTIDLSPDAVDTCGTGGDHAGTYNISTIGSIIANSTGVSIAKHGNRSVTSSCGSADVLEELGFRIDLPVEATVELYARTGFSFLFAPLFHPSMKRVAHIRKELGIRTIFNMLGP 180          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_BUCBP (Anthranilate phosphoribosyltransferase OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=trpD PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.845e-22
Identity = 54/153 (35.29%), Postives = 91/153 (59.48%), Query Frame = 2
Query:  251 LLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKV-EGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            +L + +   +SA L+ L+ +GE+  EI+G  +A +++     +      DIVGTGGD +N++NIST ++++ +ACG K+AK             D+L+  G+ I + PE  ++ +DE  I F+ + +YH   K V  VRK L++KT+FNI+ P
Sbjct:   27 MLKKINNIELSAILIALKIRGESQNEILGAVKACLEHMITFPKPTYMFSDIVGTGGDNSNSINISTTSALVGSACGFKIAKHCNGNISSKTGSADILKKFGINIQISPEKSKKMLDELNICFLFAPQYHINFKVVTQVRKILRIKTIFNIIAP 179          
The following BLAST results are available for this feature:
BLAST of CN186080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_CALMQ5.733e-2337.29Anthranilate phosphoribosyltransferase OS=Caldivir... [more]
TRPD_BACHD5.733e-2337.35Anthranilate phosphoribosyltransferase OS=Bacillus... [more]
TRPD_TRIEI7.488e-2336.22Anthranilate phosphoribosyltransferase OS=Trichode... [more]
TRPD_PARDP7.488e-2338.18Anthranilate phosphoribosyltransferase OS=Paracocc... [more]
TRPD_FRATW7.488e-2335.80Anthranilate phosphoribosyltransferase OS=Francise... [more]
TRPD_SODGM1.668e-2239.58Anthranilate phosphoribosyltransferase OS=Sodalis ... [more]
TRPD_ANATD1.668e-2236.16Anthranilate phosphoribosyltransferase OS=Anaeroce... [more]
TRPD_GLUOX2.179e-2236.14Anthranilate phosphoribosyltransferase OS=Gluconob... [more]
TRPD_CHLL22.179e-2236.84Anthranilate phosphoribosyltransferase OS=Chlorobi... [more]
TRPD_BUCBP2.845e-2235.29Anthranilate phosphoribosyltransferase OS=Buchnera... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002F09_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186080 ID=CN186080; Name=CN186080; organism=Citrus sinensis; type=EST; length=708bp
AGGGTTTCTTCCTCTCCATTTAATAATAATCACCCAAACCACCGGCCTTT
CTTACCGTCGCTTGGGAACTGTGGATTTACGACTGCGGGTAATAATCCGA
GATGCAGAGAATTAACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGAT
AGATACTCGTCCTCAAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGA
TAAGTCGAGTGGATTTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTAC
TTGTTGAATGAAGCTGATGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCT
CAGAGCCAAAGGAGAAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGA
TGATAAAGTATGCTGCGAAGGTGGAAGGGCTGGGTGATGCAGTTGACATT
GTGGGTACAGGAGGTGATGGTGCAAACACAGTGAACATTTCAACTGGTGC
TTCAATTCTTGCCGCAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTC
GGTCTAGTTCTTCTGCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGT
GTCGTTATTGACTTGGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGC
AGGAATTGGTTTCATGATGTCGACAAAGTATCACCCTGCAATGAAGTTTG
TCAGGCCAGTGAGGAAAAAGCTCAAAGTAAAAACTGTATTCAATATATTG
GGTCCTAT
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