CN186080

Overview
NameCN186080
Unique NameCN186080
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length708
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig378 contig Csv1_Contig378:145..851. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_ACIF5 (Anthranilate phosphoribosyltransferase OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=trpD PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.845e-22
Identity = 61/177 (34.46%), Postives = 102/177 (57.63%), Query Frame = 2
Query:  182 ELIDCLISRVDLTEAEAQASLDYLLNEA-DEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGD-AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            ++++ +++  DL+  E +     ++  A   A I A L+ LR KG+   E+VG  +A+     +VE   D  +D  GTGGD  +T NIST ++++AAA GA+VAK             DVLEA G+ +D+ P  V   ++  GIGF+ +  +H AM++    RK+L ++++FN++GP
Sbjct:    5 DILEQIVAGQDLSRKETETVFAAIMAGAWTPAQIGALLMGLRMKGQRVEELVGATQALRACMTRVEVSTDHLLDTCGTGGDALSTFNISTVSAVVAAAGGARVAKHGNRSMVSRSGSADVLEAAGLRMDMSPAEVADSIERIGIGFLFAPAHHGAMRYAVGPRKELAIRSLFNLMGP 181          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_ACIF2 (Anthranilate phosphoribosyltransferase OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=trpD PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.845e-22
Identity = 61/177 (34.46%), Postives = 102/177 (57.63%), Query Frame = 2
Query:  182 ELIDCLISRVDLTEAEAQASLDYLLNEA-DEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGD-AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            ++++ +++  DL+  E +     ++  A   A I A L+ LR KG+   E+VG  +A+     +VE   D  +D  GTGGD  +T NIST ++++AAA GA+VAK             DVLEA G+ +D+ P  V   ++  GIGF+ +  +H AM++    RK+L ++++FN++GP
Sbjct:    5 DILEQIVAGQDLSRKETETVFAAIMAGAWTPAQIGALLMGLRMKGQRVEELVGATQALRACMTRVEVSTDHLLDTCGTGGDALSTFNISTVSAVVAAAGGARVAKHGNRSMVSRSGSADVLEAAGLRMDMSPAEVADSIERIGIGFLFAPAHHGAMRYAVGPRKELAIRSLFNLMGP 181          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_FRATM (Anthranilate phosphoribosyltransferase OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=trpD PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.716e-22
Identity = 62/176 (35.23%), Postives = 94/176 (53.41%), Query Frame = 2
Query:  185 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGL-GDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            ++D L +  DL+  E+    DY +  + +    ++ L  L+ K ET  EI     A+     +   + GD   IVGTGGDG NT+NIST A+I+AA  G KVAK             D+LE+ GV I+L P+  ++C++   +GF+    Y    + ++  R  LK +T+FNILGP
Sbjct:    7 IVDKLYNLEDLSYQESYQLFDYFIKGQIELPSQTSILTALKLKKETSIEIAAAVEALFDNTKEFPKIKGDLAGIVGTGGDGFNTINISTTAAIVAATAGYKVAKHGGRSVSSKSGSFDLLESFGVNIELAPDQTKQCLELYNLGFLFVPFYSDGFRHIKEARTILKTRTIFNILGP 182          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_STRSV (Anthranilate phosphoribosyltransferase OS=Streptococcus sanguinis (strain SK36) GN=trpD PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.854e-22
Identity = 64/177 (36.16%), Postives = 97/177 (54.80%), Query Frame = 2
Query:  182 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEG-LGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            E+I  L    DL+ AE    ++ ++     E+ I AFL+ L+ KGET  E   LA+ M  +A ++   +  A+D  GTGGD + + NIST A+ + A  G K+AK             DVLEALG+ +DLD   + +  ++ GI F+ +   HPAMK++ P R  L + T+ N+ GP
Sbjct:    3 EIIAKLADFKDLSSAEMTDVIERIVTGRVTESQIVAFLLGLKMKGETIEERTALAQVMRGHAKQIPTTIRTAMDNCGTGGDKSFSFNISTTAAFVLAGGGIKMAKHGNRSISSKSGSADVLEALGINLDLDAASLGKVFEQTGIVFLFAKNMHPAMKYIMPARLSLGIPTIMNLTGP 179          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_LEPBL (Anthranilate phosphoribosyltransferase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=trpD PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.854e-22
Identity = 61/173 (35.26%), Postives = 96/173 (55.49%), Query Frame = 2
Query:  197 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLG--DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            LI    ++  EA+  ++ ++  E  E L+S+F+  +RAKGE+  E++G   A+ K A K + +   D +D  GTGGDG  T+N+ST ++I  A+ G KVAK             D+L  LG   +   E V   +   G  F+ +  +HP+MK+   VRK+L  +TVFN++GP
Sbjct:   10 LIEHKHISVEEAEFFMNRVMKGEVSEILLSSFVTAMRAKGESVDEVLGCTLALRKNALKPKTVFPFDLLDTCGTGGDGQGTINVSTLSAITLASLGVKVAKHGNRSVSSHTGSSDILARLGYQTEATQEEVEAHLISRGFTFLFAPMWHPSMKYAGSVRKELGFRTVFNMIGP 182          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_LEPBJ (Anthranilate phosphoribosyltransferase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=trpD PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.854e-22
Identity = 61/173 (35.26%), Postives = 96/173 (55.49%), Query Frame = 2
Query:  197 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLG--DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            LI    ++  EA+  ++ ++  E  E L+S+F+  +RAKGE+  E++G   A+ K A K + +   D +D  GTGGDG  T+N+ST ++I  A+ G KVAK             D+L  LG   +   E V   +   G  F+ +  +HP+MK+   VRK+L  +TVFN++GP
Sbjct:   10 LIEHKHISVEEAEFFMNRVMKGEVSEILLSSFVTAMRAKGESVDEVLGCTLALRKNALKPKTVFPFDLLDTCGTGGDGQGTINVSTLSAITLASLGVKVAKHGNRSVSSHTGSSDILARLGYQTEATQEEVEAHLISRGFTFLFAPMWHPSMKYAGSVRKELGFRTVFNMIGP 182          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD2_ANASP (Anthranilate phosphoribosyltransferase 2 OS=Anabaena sp. (strain PCC 7120) GN=trpD2 PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.854e-22
Identity = 66/186 (35.48%), Postives = 95/186 (51.08%), Query Frame = 2
Query:  185 LIDCLISRVDLTEAEAQASLDYLLNEA-DEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLG-----------DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            L+  LI    L+ ++A   +   L+EA    L  A L  L  KG +  E+ G+A  +   +    G               +D  GTGGDG++T NIST  + +AAA G  VAK             DVLEALGV +   PE V+  + E GI F+ +  +HPA+K V  +R+ L+++TVFN+LGP
Sbjct:   18 LLQQLIDGESLSRSQAAELMQGWLSEAVPPELSGAILTALNFKGVSADELTGMAEVLQSQSKMGTGENYSQLPITNSPFSIIDTCGTGGDGSSTFNISTAVAFVAAAYGVPVAKHGNRSASSLTGSADVLEALGVNLGASPEKVQAALQEVGITFLFAPGWHPALKAVATLRRTLRIRTVFNLLGP 203          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_DICT6 (Anthranilate phosphoribosyltransferase OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) GN=trpD PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.339e-22
Identity = 58/149 (38.93%), Postives = 81/149 (54.36%), Query Frame = 2
Query:  260 EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            E  EA + A L+ LR KGE   EI G    + + A K+     AVD+ GTGGD +NT NIST  +   A+ G +VAK             DV+EALG     +PE + R +DE GIG + +  +HP +     VR++L + T+FN+ GP
Sbjct:   31 EITEAQLGAVLLGLRLKGENPEEIAGFVDVLHEKAKKIPNRTPAVDVCGTGGDKSNTFNISTAVAFTLASLGVRVAKHGNRAMSSKAGSIDVIEALGFKCSDNPEEIARDIDEKGIGIIFAPYFHPVVGKAVKVRRELGIGTIFNMAGP 179          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_AQUAE (Anthranilate phosphoribosyltransferase OS=Aquifex aeolicus GN=trpD PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.339e-22
Identity = 58/150 (38.67%), Postives = 86/150 (57.33%), Query Frame = 2
Query:  263 ADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKV--EGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            A +A I A ++  + KGET  EI G  +   +   +V  +   + VD+VGTGGD ++T N+ST    + A  G KVAK             D LEALG  ++L PE V R ++E G GFM +  +HPAMK V   R+++ V+++FN++GP
Sbjct:   34 ATDAQIGALVMGTKMKGETPEEIEGAVKLFREKVVRVPVKDPEELVDVVGTGGDKSSTFNVSTVTGFVLAGAGVKVAKHGNRSVSSKSGSADFLEALGAKVELLPEKVARLIEEVGFGFMFAPLFHPAMKRVVSPRREVGVRSIFNLIGP 183          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_SYNPX (Anthranilate phosphoribosyltransferase OS=Synechococcus sp. (strain WH8102) GN=trpD PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.279e-22
Identity = 66/185 (35.68%), Postives = 98/185 (52.97%), Query Frame = 2
Query:  161 PQTPCFNELIDCLISRVDLTEAEAQASLDYLLNEA-DEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDA--VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            P +P ++ L++ L+    L+ A+A   +   L+E+       AFL  LRAKG    E+  +A  + +         D   VD  GTGGDGA+T NIST  +  AAACG +VAK             DVLE LG+ +    + V   +  AG+ F+ +  +HPA+  + P+R+ L V+TVFN+LGP
Sbjct:    9 PASPSWSGLLELLLCGESLSAAQATDLMQAWLSESLTPVQTGAFLAGLRAKGMEAEELAAMAAVLREACPLPCARPDRFLVDTCGTGGDGADTFNISTAVAFTAAACGVEVAKHGNRSASGKVGSADVLEGLGLNLKAPLQLVVDAIPAAGVTFLFAPAWHPALVNLAPLRRSLGVRTVFNLLGP 193          
The following BLAST results are available for this feature:
BLAST of CN186080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_ACIF52.845e-2234.46Anthranilate phosphoribosyltransferase OS=Acidithi... [more]
TRPD_ACIF22.845e-2234.46Anthranilate phosphoribosyltransferase OS=Acidithi... [more]
TRPD_FRATM3.716e-2235.23Anthranilate phosphoribosyltransferase OS=Francise... [more]
TRPD_STRSV4.854e-2236.16Anthranilate phosphoribosyltransferase OS=Streptoc... [more]
TRPD_LEPBL4.854e-2235.26Anthranilate phosphoribosyltransferase OS=Leptospi... [more]
TRPD_LEPBJ4.854e-2235.26Anthranilate phosphoribosyltransferase OS=Leptospi... [more]
TRPD2_ANASP4.854e-2235.48Anthranilate phosphoribosyltransferase 2 OS=Anabae... [more]
TRPD_DICT66.339e-2238.93Anthranilate phosphoribosyltransferase OS=Dictyogl... [more]
TRPD_AQUAE6.339e-2238.67Anthranilate phosphoribosyltransferase OS=Aquifex ... [more]
TRPD_SYNPX8.279e-2235.68Anthranilate phosphoribosyltransferase OS=Synechoc... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002F09_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186080 ID=CN186080; Name=CN186080; organism=Citrus sinensis; type=EST; length=708bp
AGGGTTTCTTCCTCTCCATTTAATAATAATCACCCAAACCACCGGCCTTT
CTTACCGTCGCTTGGGAACTGTGGATTTACGACTGCGGGTAATAATCCGA
GATGCAGAGAATTAACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGAT
AGATACTCGTCCTCAAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGA
TAAGTCGAGTGGATTTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTAC
TTGTTGAATGAAGCTGATGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCT
CAGAGCCAAAGGAGAAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGA
TGATAAAGTATGCTGCGAAGGTGGAAGGGCTGGGTGATGCAGTTGACATT
GTGGGTACAGGAGGTGATGGTGCAAACACAGTGAACATTTCAACTGGTGC
TTCAATTCTTGCCGCAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTC
GGTCTAGTTCTTCTGCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGT
GTCGTTATTGACTTGGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGC
AGGAATTGGTTTCATGATGTCGACAAAGTATCACCCTGCAATGAAGTTTG
TCAGGCCAGTGAGGAAAAAGCTCAAAGTAAAAACTGTATTCAATATATTG
GGTCCTAT
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