CN186080

Overview
NameCN186080
Unique NameCN186080
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length708
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig378 contig Csv1_Contig378:145..851. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_STRGG (Anthranilate phosphoribosyltransferase OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=trpD PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.033e-32
Identity = 79/175 (45.14%), Postives = 106/175 (60.57%), Query Frame = 2
Query:  185 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            L++ L+   DL+  E   ++D +++ EA +A I+ F V LRAKGET  E+ GL RAM  +A  +E  G  VDIVGTGGD A TVNIST ++I+ A  GAKV K             DVLE LGV ++L P  V    + AGI F  + K+HPA+++    RK+L  +T FNILGP
Sbjct:   20 LLNPLLRGEDLSAEETAWAMDRIMSGEATDAQIAGFAVALRAKGETVDEVTGLVRAMYAHANTIEVPGRTVDIVGTGGDLAKTVNISTMSAIVIAGTGAKVVKHGNRAASSASGSSDVLEKLGVNLELTPRRVVEVAEAAGITFCFAVKFHPALRYAAKARKELGAQTTFNILGP 194          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_RHILW (Anthranilate phosphoribosyltransferase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=trpD PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.033e-32
Identity = 77/169 (45.56%), Postives = 102/169 (60.36%), Query Frame = 2
Query:  203 SRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            SR  LT  EA+A+ D L++ +A  + I  FL+ LR +GET  EIVG   AM      VE   DA+DIVGTGGD + T NIST A+++ A  G  VAK             D L ALGV +D+ PE + RC+ EAG+GFM +  +H AM+ V P R +L  +T+FN+LGP
Sbjct:   13 SREPLTRDEARAAFDILMSGQATPSQIGGFLMALRVRGETVDEIVGAVTAMRSKMLTVEAPEDAIDIVGTGGDASGTYNISTLAALIVAGAGVPVAKHGNRALSSKSGAADNLAALGVKLDVGPEIISRCIAEAGVGFMFAQLHHSAMRHVGPSRVELGTRTIFNLLGP 181          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_RHILO (Anthranilate phosphoribosyltransferase OS=Rhizobium loti GN=trpD PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.033e-32
Identity = 73/165 (44.24%), Postives = 101/165 (61.21%), Query Frame = 2
Query:  215 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            L+  EA+ + D +++ +A    I  FL+ LR +GET  EI G    M     +VE    A+DIVGTGGD +++VNISTG++ + AA G  VAK             DVL ALGV ID+ P+ + RC+ EAG+GFM +  +HPAMK V P R +L  +T+FN+LGP
Sbjct:   17 LSFEEAREAFDIIMSGDATPGQIGGFLMALRVRGETVSEISGAVATMRAKMLRVEAPAGAIDIVGTGGDNSHSVNISTGSAFVIAAAGVPVAKHGNRGLSSLTGAADVLIALGVKIDIPPDAIGRCIHEAGVGFMFAPAHHPAMKHVGPTRVELGTRTIFNLLGP 181          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_BRASO (Anthranilate phosphoribosyltransferase OS=Bradyrhizobium sp. (strain ORS278) GN=trpD PE=3 SV=2)

HSP 1 Score: 138.272 bits (347), Expect = 3.961e-32
Identity = 75/165 (45.45%), Postives = 101/165 (61.21%), Query Frame = 2
Query:  215 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            L+  +A ++ D +++ EA  + + A L+ LR +GET  EI G    M     +V+   +AVDIVGTGGDG+ +VN+ST AS + A  G  VAK             DVL ALGV IDL P+ V RC+ EAGIGFM +  +HPAMK V P R +L  +T+FN+LGP
Sbjct:   17 LSREQAASAFDSMMSGEATPSQMGALLMALRVRGETVEEITGAVSVMRAKMLRVDAPANAVDIVGTGGDGSGSVNVSTCASFIVAGAGVPVAKHGNRALSSRSGAADVLAALGVKIDLKPDQVGRCIREAGIGFMFAPAHHPAMKNVGPTRVELATRTIFNLLGP 181          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_BRASB (Anthranilate phosphoribosyltransferase OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=trpD PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 3.961e-32
Identity = 76/165 (46.06%), Postives = 100/165 (60.61%), Query Frame = 2
Query:  215 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            L+  EA ++ D +++ EA  + + A L+ LR +GET  EI G    M     +V+    AVDIVGTGGDG+ +VN+ST A+ + A  G  VAK             DVL ALGV IDL P+ V RCV EAGIGFM +  +HPAMK V P R +L  +T+FN+LGP
Sbjct:   17 LSREEAASAFDSMMSGEATPSQMGALLMALRVRGETVEEITGAVSVMRAKMLRVDAPAGAVDIVGTGGDGSGSVNVSTCAAFIVAGAGIPVAKHGNRALSSRSGAADVLAALGVKIDLKPDQVGRCVQEAGIGFMFAPAHHPAMKNVGPTRVELATRTIFNLLGP 181          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_RHOFD (Anthranilate phosphoribosyltransferase OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=trpD PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 5.174e-32
Identity = 70/154 (45.45%), Postives = 99/154 (64.29%), Query Frame = 2
Query:  251 LLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            +  E    +++A +  LR K ET GEI   A+ M +++ KV        VDIVGTGGDG++T NIST A  +AAA GA+V+K             DV+E+LGV I+L PE + +C+++ G+GFM +  +HPAMK V PVRK+L +KT+FN+LGP
Sbjct:   35 MTGEWSPVMMAALITGLRVKKETIGEITAAAQVMREFSTKVNVADTSHLVDIVGTGGDGSHTFNISTCAMFVAAAAGARVSKHGGRSVSSKSGSADVMESLGVNINLSPEAIAQCIEQVGVGFMFAPNHHPAMKNVAPVRKELGIKTIFNLLGP 188          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_RHIL3 (Anthranilate phosphoribosyltransferase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=trpD PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 5.174e-32
Identity = 75/169 (44.38%), Postives = 102/169 (60.36%), Query Frame = 2
Query:  203 SRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            SR  LT  EA+++ D L++ +A  + I  FL+ LR +GET  EIVG   +M      VE   DA+DIVGTGGD + T NIST A+++ A  G  VAK             D L ALGV +D+ PE + RC+ EAG+GFM +  +H AM+ V P R +L  +T+FN+LGP
Sbjct:   13 SREPLTREEARSAFDILMSGQATPSQIGGFLMALRVRGETVDEIVGAVASMRSKMLTVEAPADAIDIVGTGGDASGTYNISTLAALIVAGAGVPVAKHGNRALSSKSGAADNLAALGVKLDVGPEIISRCIAEAGVGFMFAQMHHSAMRHVGPSRVELGTRTIFNLLGP 181          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_ARTAT (Anthranilate phosphoribosyltransferase OS=Arthrobacter aurescens (strain TC1) GN=trpD PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 5.174e-32
Identity = 79/175 (45.14%), Postives = 106/175 (60.57%), Query Frame = 2
Query:  185 LIDCLISRVDLTEAEAQASLDYLL-NEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            LI  LI+  DL     + +++ ++  EA  A I+ FLV LRAKGET  E+ GL  AM+++A  ++  G+ +DIVGTGGD  NTVNIST A+++AA  GAKV K             DVLEALGV +DL  E V R  +EAGI F  +  +HP+ +     R++L V T FN LGP
Sbjct:   17 LISALINGDDLAVGNTEWAMNTIMAGEATPAQIAGFLVALRAKGETVEELAGLVEAMVQHANPIDISGEKLDIVGTGGDRLNTVNISTMAALVAAGAGAKVVKHGNRAASSASGSADVLEALGVRLDLSIEQVARNAEEAGITFCFAQVFHPSFRHTAVPRRELAVPTAFNFLGP 191          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD1_STRCO (Anthranilate phosphoribosyltransferase 1 OS=Streptomyces coelicolor GN=trpD1 PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 5.174e-32
Identity = 79/175 (45.14%), Postives = 106/175 (60.57%), Query Frame = 2
Query:  185 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            L++ L+   DL+  +   +LD ++  EA +  I+ F V LR KGET  EI GL R M ++A  +E  G  VDIVGTGGDGA TVNIST ++I+ A  GAKV K             DVLE LGV ++L P+ V    +EAGI F  + K+HPA++ V   R +L ++TVFN LGP
Sbjct:   20 LLNGLLDGRDLSADDTAWALDVIMRGEATDVQIAGFAVGLRFKGETVEEISGLVRTMYEHANVIEVPGKTVDIVGTGGDGAKTVNISTMSAIVLAGTGAKVVKHGNRAASSASGASDVLEKLGVNLELTPQRVAEVAEEAGITFCFAVKFHPALRHVATARGQLGIRTVFNFLGP 194          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_THEFY (Anthranilate phosphoribosyltransferase OS=Thermobifida fusca (strain YX) GN=trpD PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 6.757e-32
Identity = 74/178 (41.57%), Postives = 109/178 (61.24%), Query Frame = 2
Query:  176 FNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            ++ LI  L++   LT  + + +++ +++  A +A I+ F + LRAKGE+  E+ GLA+ M+ +A  +   G  +DIVGTGGD A+TVN+ST ASI+A+A GA+V K             DVLE LGV+IDLDP       +E  I F  +  YHP++K+    R++L V TVFN LGP
Sbjct:    6 WSHLISALLNGTSLTADDTKWAMNEIMSGSATDAQIAGFAIALRAKGESVAEVRGLAQGMLDHAVTISVPGATLDIVGTGGDRAHTVNVSTMASIVASAAGARVVKHGNRAASSSCGTADVLERLGVIIDLDPADAVAVAEEVDITFCFAPLYHPSLKYAAKPRRELAVPTVFNFLGP 183          
The following BLAST results are available for this feature:
BLAST of CN186080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_STRGG3.033e-3245.14Anthranilate phosphoribosyltransferase OS=Streptom... [more]
TRPD_RHILW3.033e-3245.56Anthranilate phosphoribosyltransferase OS=Rhizobiu... [more]
TRPD_RHILO3.033e-3244.24Anthranilate phosphoribosyltransferase OS=Rhizobiu... [more]
TRPD_BRASO3.961e-3245.45Anthranilate phosphoribosyltransferase OS=Bradyrhi... [more]
TRPD_BRASB3.961e-3246.06Anthranilate phosphoribosyltransferase OS=Bradyrhi... [more]
TRPD_RHOFD5.174e-3245.45Anthranilate phosphoribosyltransferase OS=Rhodofer... [more]
TRPD_RHIL35.174e-3244.38Anthranilate phosphoribosyltransferase OS=Rhizobiu... [more]
TRPD_ARTAT5.174e-3245.14Anthranilate phosphoribosyltransferase OS=Arthroba... [more]
TRPD1_STRCO5.174e-3245.14Anthranilate phosphoribosyltransferase 1 OS=Strept... [more]
TRPD_THEFY6.757e-3241.57Anthranilate phosphoribosyltransferase OS=Thermobi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002F09_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186080 ID=CN186080; Name=CN186080; organism=Citrus sinensis; type=EST; length=708bp
AGGGTTTCTTCCTCTCCATTTAATAATAATCACCCAAACCACCGGCCTTT
CTTACCGTCGCTTGGGAACTGTGGATTTACGACTGCGGGTAATAATCCGA
GATGCAGAGAATTAACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGAT
AGATACTCGTCCTCAAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGA
TAAGTCGAGTGGATTTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTAC
TTGTTGAATGAAGCTGATGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCT
CAGAGCCAAAGGAGAAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGA
TGATAAAGTATGCTGCGAAGGTGGAAGGGCTGGGTGATGCAGTTGACATT
GTGGGTACAGGAGGTGATGGTGCAAACACAGTGAACATTTCAACTGGTGC
TTCAATTCTTGCCGCAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTC
GGTCTAGTTCTTCTGCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGT
GTCGTTATTGACTTGGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGC
AGGAATTGGTTTCATGATGTCGACAAAGTATCACCCTGCAATGAAGTTTG
TCAGGCCAGTGAGGAAAAAGCTCAAAGTAAAAACTGTATTCAATATATTG
GGTCCTAT
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