CN186080

Overview
NameCN186080
Unique NameCN186080
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length708
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig378 contig Csv1_Contig378:145..851. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_RHORT (Anthranilate phosphoribosyltransferase OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=trpD PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 6.757e-32
Identity = 75/165 (45.45%), Postives = 100/165 (60.61%), Query Frame = 2
Query:  215 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            L+EA+A  + + +++  A  A I  FL+ LR +GET  EI   AR M   AA+++    A+DIVGTGGD A T NIST A+++ AACG  VAK             DVL ALGV +D D   V R + E GIGFM + ++H AMK V P R +L  +T+FN+LGP
Sbjct:   24 LSEADATRAFEAIMSGNATPAQIGGFLMALRVRGETVAEITAAARTMRDKAARIQAPAGAIDIVGTGGDCAGTYNISTAAALVTAACGVPVAKHGNRAASSKSGSADVLAALGVNLDADLALVERSIAEVGIGFMFAQRHHSAMKHVAPARSELGTRTIFNLLGP 188          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_METKA (Anthranilate phosphoribosyltransferase OS=Methanopyrus kandleri GN=trpD PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 6.757e-32
Identity = 76/176 (43.18%), Postives = 107/176 (60.80%), Query Frame = 2
Query:  185 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVE-GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            +++ +I   DL   EA+  +  ++  E  +  ++  LV LR KG T  E+VG    M+++A KV+  +   VD  GTGGD  +T N ST A + AAA G  VAK             D+LEALGV I+ DP+ V+RC++E G GFM + K+HPAMK V PVR+KL ++TVFN+LGP
Sbjct:    3 VLERIIRGSDLDREEARDLMCRIVGGELSDVEVAGILVALRCKGYTSEELVGFVDGMMEHAVKVDPDVERLVDTAGTGGDELDTFNASTLAGLTAAAAGVPVAKHGNRSVTSECGSADILEALGVNIEADPDTVKRCIEEVGFGFMFAPKFHPAMKNVMPVRRKLGIRTVFNVLGP 178          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_RALPJ (Anthranilate phosphoribosyltransferase OS=Ralstonia pickettii (strain 12J) GN=trpD PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.153e-31
Identity = 76/153 (49.67%), Postives = 95/153 (62.09%), Query Frame = 2
Query:  260 EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDA----VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            E    + +A  + LR K ET GEI   A  M ++A KV+   +     VDIVGTGGDGANT NIST +  +AAA GA++AK             DVLEALGV I L PE V   ++ AGIGFM +  +HPAMK V P+RK+L V+T+FNILGP
Sbjct:   34 EMSPVMAAALTMGLRVKKETIGEIAAAATVMREFATKVDVPAEVSDHFVDIVGTGGDGANTFNISTASMFVAAAAGARIAKHGGRGVSSKSGSADVLEALGVNIMLTPEQVAESIETAGIGFMFAPNHHPAMKNVAPIRKELGVRTIFNILGP 186          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_RALEH (Anthranilate phosphoribosyltransferase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=trpD PE=3 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 1.153e-31
Identity = 75/146 (51.37%), Postives = 96/146 (65.75%), Query Frame = 2
Query:  275 LISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLG--DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            + +A L  LR K ET GEI   A+ M ++A KV      + VDIVGTGGDG++T NIST +  +AAA GAK+AK             DVLEALGV I L PE V +C++E GIGFM +  +HPAMK V P+RK++ V+T+FNILGP
Sbjct:   38 MAAAILTGLRVKKETIGEISAAAQVMREFANKVPVADRENFVDIVGTGGDGSHTFNISTASMFVAAAAGAKIAKHGNRGVSSKSGSADVLEALGVNIMLTPEQVGQCIEETGIGFMFAPTHHPAMKNVAPIRKEMGVRTIFNILGP 183          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_METSB (Anthranilate phosphoribosyltransferase OS=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) GN=trpD PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.153e-31
Identity = 76/175 (43.43%), Postives = 102/175 (58.29%), Query Frame = 2
Query:  185 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            L+  L +   LT+AEA  + D +    A  A + AFL+ LR +GET  EIVG   AM     +V+   DA+DIVGTGGDG +T N+ST A+++ +ACG  VAK             DVL ALGV I LD   V  C++ AG+ FM +  +H AM+ V   R +L  +T+FNILGP
Sbjct:    7 LLGKLATGASLTQAEATRAFDLIFEGAATPAQLGAFLMALRVRGETIDEIVGAVAAMRARMLRVDAPADAMDIVGTGGDGHSTYNVSTLAALIVSACGVPVAKHGNRAASSQSGASDVLSALGVKIGLDSREVEACLEAAGVAFMSAQAHHAAMRHVAAARAELGTRTIFNILGP 181          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_CARHZ (Anthranilate phosphoribosyltransferase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=trpD PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.153e-31
Identity = 83/180 (46.11%), Postives = 110/180 (61.11%), Query Frame = 2
Query:  182 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKV----EGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            E+++ L+   +L  +EA A+++ L+  +  EA ++AFLV L+ KGET  EI   A A+ + A +V    EGL   VD  GTGGDG  T NIST A+ + A  G  VAK             DVLEALGV IDLD +G  RCVDE GIGF+ +   HPAM+ V   R+++ V+TVFNILGP
Sbjct:    4 EVLERLMRGENLNFSEALATMNELMEGKYTEAQVAAFLVALKMKGETEEEISAFALALREKARRVITQTEGL---VDTCGTGGDGRQTFNISTAAAFVVAGAGIPVAKHGNRSVSSRSGSADVLEALGVNIDLDAKGTARCVDEIGIGFLFAPNLHPAMRHVAKTRREIGVRTVFNILGP 180          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_RALEJ (Anthranilate phosphoribosyltransferase OS=Ralstonia eutropha (strain JMP134) GN=trpD PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.505e-31
Identity = 75/146 (51.37%), Postives = 96/146 (65.75%), Query Frame = 2
Query:  275 LISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLG--DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            + +A L  LR K ET GEI   A+ M ++A KVE     + VDIVGTGGDG++T NIST +  +AAA GAK+AK             DVLEALGV I L PE V +C+ + GIGFM +  +HPAMK V P+RK++ V+T+FNILGP
Sbjct:   66 MAAAILTGLRVKKETIGEISAAAQVMREFANKVEVTDRENFVDIVGTGGDGSHTFNISTASMFVAAAAGAKIAKHGNRGVSSKSGSADVLEALGVNIMLTPEQVGQCIAQTGIGFMFAPTHHPAMKNVAPIRKEMGVRTIFNILGP 211          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_NOCFA (Anthranilate phosphoribosyltransferase OS=Nocardia farcinica GN=trpD PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.505e-31
Identity = 77/175 (44.00%), Postives = 108/175 (61.71%), Query Frame = 2
Query:  185 LIDCLISRVDLTEAEAQASLDYLLNE-ADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            ++  L    DL+ A+   +++ ++++ A  A I+AF V ++ KG T  E+ GLA  M ++A  V   GDAVDIVGTGGD + +VNIST +SI+ AA G  V K             DVLEALGV ++L PE V RCV E GIGF  +  +HPA++F    R+++ + TVFNILGP
Sbjct:    1 MLGALADGRDLSAADTAWAMNEIMSDNATSAQIAAFGVAIKIKGPTPEELGGLATGMFEHARLVSIDGDAVDIVGTGGDRSGSVNISTMSSIVVAAAGVPVVKHGNRAASSKSGGADVLEALGVRLNLGPEAVARCVREVGIGFCFAPVFHPALRFAGAARREIGIPTVFNILGP 175          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_BRAJA (Anthranilate phosphoribosyltransferase OS=Bradyrhizobium japonicum GN=trpD PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.966e-31
Identity = 77/175 (44.00%), Postives = 102/175 (58.29%), Query Frame = 2
Query:  185 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            +I  + +   L+  EA ++ D +++ EA  + +   L+ LR +GET  EI G   AM      V    DAVDIVGTGGDG+ +VN+ST AS + +  G  VAK             DVL +LGV IDL PE V RCV E GIGFM +  +HPAMK V P R +L  +T+FN+LGP
Sbjct:    7 IIGKVATGASLSRDEAASAFDAMMSGEATPSQMGGLLMALRVRGETVDEITGAVAAMRSKMLTVTAPPDAVDIVGTGGDGSGSVNVSTCASFIVSGAGVPVAKHGNRALSSRSGAADVLASLGVRIDLRPEQVGRCVRECGIGFMFAPAHHPAMKNVGPTRVELATRTIFNLLGP 181          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_AGRRK (Anthranilate phosphoribosyltransferase OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=trpD PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.568e-31
Identity = 75/169 (44.38%), Postives = 99/169 (58.58%), Query Frame = 2
Query:  203 SRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            +R  LT  EA+ + D L++ EA  + I AFL+ LR +GET  EIVG   AM      VE   DA+DIVGTGGDG  T NIST A+ + A  G  VAK             D    LG+ +D+ PE + RC+ EAGIGFM +  +H +M+ V P R +L  +T+FN+LGP
Sbjct:   13 NREVLTRDEARQAFDILMSGEATPSQIGAFLMALRVRGETVDEIVGAVTAMRAKMLPVEAPADAIDIVGTGGDGFGTYNISTLAAFIVAGAGVPVAKHGNRAQSSKAGTADTQSVLGIKLDIGPEVIARCIREAGIGFMFAQLHHSSMRHVGPSRVELGTRTIFNLLGP 181          
The following BLAST results are available for this feature:
BLAST of CN186080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_RHORT6.757e-3245.45Anthranilate phosphoribosyltransferase OS=Rhodospi... [more]
TRPD_METKA6.757e-3243.18Anthranilate phosphoribosyltransferase OS=Methanop... [more]
TRPD_RALPJ1.153e-3149.67Anthranilate phosphoribosyltransferase OS=Ralstoni... [more]
TRPD_RALEH1.153e-3151.37Anthranilate phosphoribosyltransferase OS=Ralstoni... [more]
TRPD_METSB1.153e-3143.43Anthranilate phosphoribosyltransferase OS=Methyloc... [more]
TRPD_CARHZ1.153e-3146.11Anthranilate phosphoribosyltransferase OS=Carboxyd... [more]
TRPD_RALEJ1.505e-3151.37Anthranilate phosphoribosyltransferase OS=Ralstoni... [more]
TRPD_NOCFA1.505e-3144.00Anthranilate phosphoribosyltransferase OS=Nocardia... [more]
TRPD_BRAJA1.966e-3144.00Anthranilate phosphoribosyltransferase OS=Bradyrhi... [more]
TRPD_AGRRK2.568e-3144.38Anthranilate phosphoribosyltransferase OS=Agrobact... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002F09_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186080 ID=CN186080; Name=CN186080; organism=Citrus sinensis; type=EST; length=708bp
AGGGTTTCTTCCTCTCCATTTAATAATAATCACCCAAACCACCGGCCTTT
CTTACCGTCGCTTGGGAACTGTGGATTTACGACTGCGGGTAATAATCCGA
GATGCAGAGAATTAACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGAT
AGATACTCGTCCTCAAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGA
TAAGTCGAGTGGATTTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTAC
TTGTTGAATGAAGCTGATGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCT
CAGAGCCAAAGGAGAAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGA
TGATAAAGTATGCTGCGAAGGTGGAAGGGCTGGGTGATGCAGTTGACATT
GTGGGTACAGGAGGTGATGGTGCAAACACAGTGAACATTTCAACTGGTGC
TTCAATTCTTGCCGCAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTC
GGTCTAGTTCTTCTGCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGT
GTCGTTATTGACTTGGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGC
AGGAATTGGTTTCATGATGTCGACAAAGTATCACCCTGCAATGAAGTTTG
TCAGGCCAGTGAGGAAAAAGCTCAAAGTAAAAACTGTATTCAATATATTG
GGTCCTAT
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