CN186080

Overview
NameCN186080
Unique NameCN186080
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length708
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig378 contig Csv1_Contig378:145..851. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_PHOPR (Anthranilate phosphoribosyltransferase OS=Photobacterium profundum GN=trpD PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.720e-31
Identity = 74/177 (41.81%), Postives = 105/177 (59.32%), Query Frame = 2
Query:  182 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYA-AKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            E+ D L ++  LT+ E+    D ++  + D  L+SA L  L+ KGET  EI G A A++  A A      D  DIVGTGGDGANT+NIST A+ +AAACG KVAK             D+L+  G+ + + PE  R  +DE G+ F+ + +YH  ++   PVR+ LK +T+FN+LGP
Sbjct:   10 EIADKLYAQQALTQDESHVLFDAIIKGDVDPILLSAVLTALKIKGETPAEIAGAASALLANANAFPSPEYDFADIVGTGGDGANTINISTTAAFVAAACGVKVAKHGNRGVSSKSGSSDLLDKFGINLAMTPENARGALDELGVCFLFAPEYHSGVRHAMPVRQTLKTRTIFNVLGP 186          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_METMP (Anthranilate phosphoribosyltransferase OS=Methanococcus maripaludis GN=trpD PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.720e-31
Identity = 76/174 (43.68%), Postives = 107/174 (61.49%), Query Frame = 2
Query:  185 LIDCLISRVDLTEAEAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            +++ LI R +L+  E+    + LLNE+ E  I+A+LV L+ KG T  EI G A+AM   A K++ LGD  D  GTGGDG+ T+N+ST  SI+ A C  KVAK             +V +ALG  I   P+  ++ +D+    F+ + KYHPA+K + PVR +LKVKT+FNILGP
Sbjct:    1 MLNKLIERENLSFEESYELFNVLLNES-EMRIAAYLVALQTKGLTADEIAGFAKAMRDNAVKID-LGDVTDTCGTGGDGSKTINVSTAVSIILA-CFTKVAKHGNVSITSNSGSANVYKALGCKIPETPDDAKKSMDKTNFAFLFAQKYHPALKKIMPVRNELKVKTIFNILGP 171          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_DIAST (Anthranilate phosphoribosyltransferase OS=Diaphorobacter sp. (strain TPSY) GN=trpD PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.720e-31
Identity = 73/151 (48.34%), Postives = 94/151 (62.25%), Query Frame = 2
Query:  260 EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            E    + +A    LR K ET GEI   A+ M +++ KV+       VDIVGTGGDGANT NIST A+ + AA GAKV+K             D +EALGV I+L P  + +C+ + GIGFM +  +HPAMK V PVRK+L V+T+FNILGP
Sbjct:   35 ELSPVMTAAITTGLRVKKETIGEITAAAQVMREFSHKVQVHDTKHLVDIVGTGGDGANTFNISTCATFVIAAAGAKVSKHGGRSVSSKSGSADAMEALGVHINLQPAQIAQCIGDVGIGFMFAPNHHPAMKNVAPVRKELGVRTIFNILGP 185          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_ACISJ (Anthranilate phosphoribosyltransferase OS=Acidovorax sp. (strain JS42) GN=trpD PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.720e-31
Identity = 73/151 (48.34%), Postives = 94/151 (62.25%), Query Frame = 2
Query:  260 EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            E    + +A    LR K ET GEI   A+ M +++ KV+       VDIVGTGGDGANT NIST A+ + AA GAKV+K             D +EALGV I+L P  + +C+ + GIGFM +  +HPAMK V PVRK+L V+T+FNILGP
Sbjct:   35 ELSPVMTAAITTGLRVKKETIGEITAAAQVMREFSHKVQVHDTKHLVDIVGTGGDGANTFNISTCATFVIAAAGAKVSKHGGRSVSSKSGSADAMEALGVHINLQPAQIAQCIGDVGIGFMFAPNHHPAMKNVAPVRKELGVRTIFNILGP 185          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_XANC5 (Anthranilate phosphoribosyltransferase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=trpD PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 7.471e-31
Identity = 74/151 (49.01%), Postives = 95/151 (62.91%), Query Frame = 2
Query:  260 EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLG--DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            E  + +++A L  LR K ET GEI G A  M +++ +V+       VDIVGTGGDG++T NIST A  +AAA GAKVAK             D LEALG VI+L PE V   +   GIGFM +  +HPAMK V PVR+++ V+T+FNILGP
Sbjct:   34 EVSDMMVAAILTGLRVKKETIGEIAGAATVMREFSRRVDVADRQHMVDIVGTGGDGSDTFNISTCAMFVAAAGGAKVAKHGNRSVSSKSGSADALEALGAVIELQPEQVASALAHTGIGFMYAPVHHPAMKVVAPVRREMGVRTIFNILGP 184          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_XANAC (Anthranilate phosphoribosyltransferase OS=Xanthomonas axonopodis pv. citri GN=trpD PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 7.471e-31
Identity = 74/151 (49.01%), Postives = 95/151 (62.91%), Query Frame = 2
Query:  260 EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLG--DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            E  + +++A L  LR K ET GEI G A  M +++ +V+       VDIVGTGGDG++T NIST A  +AAA GAKVAK             D LEALG VI+L PE V   +   GIGFM +  +HPAMK V PVR+++ V+T+FNILGP
Sbjct:   34 EVSDMMVAAILTGLRVKKETIGEIAGAATVMREFSRRVDVADRQHMVDIVGTGGDGSHTFNISTCAMFVAAAGGAKVAKHGNRSVSSKSGSADALEALGAVIELQPEQVASALAHTGIGFMYAPVHHPAMKVVAPVRREMGVRTIFNILGP 184          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_THICR (Anthranilate phosphoribosyltransferase OS=Thiomicrospira crunogena (strain XCL-2) GN=trpD PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 7.471e-31
Identity = 81/179 (45.25%), Postives = 109/179 (60.89%), Query Frame = 2
Query:  182 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDA---VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            + ++ L+++ DLT  + +  +  L++ +A  A I+A LV LRAKGET  EI   A  M   A +V  L D    VD  GTGGDGANT NIST ++ +AAA GAKVAK             D+LE  GV ++L PE V  CV+  G+GFM +  +H AMK V  VRK++ V+T+FNILGP
Sbjct:    5 DALEQLLNKHDLTAEQMEWVMQMLMSGQATSAQIAAILVALRAKGETVEEITAAASVMRSLATQVT-LTDKTHMVDTCGTGGDGANTFNISTASAFVAAAAGAKVAKHGSRSVSSQSGSADLLEKAGVNLNLTPEQVAECVETVGVGFMYAPAHHSAMKHVIGVRKEIGVRTLFNILGP 182          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_PYRAB (Anthranilate phosphoribosyltransferase OS=Pyrococcus abyssi GN=trpD PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 7.471e-31
Identity = 74/174 (42.53%), Postives = 112/174 (64.37%), Query Frame = 2
Query:  185 LIDCLISRVDLTEAEAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            +++ +I+R +L+  EA      L+NE+D   I+A+L   + KG T  EI GLA+AM  YA K+E LG+  D  GTGGDG++++N+ST ++++ +A   KVAK             +VLEALG+ I + PE  R+ +++    F+ +  YHPA+K + PVR++LKVKTVFNILGP
Sbjct:    1 MLEKIINRENLSFEEAYNLFKELMNESD-VRIAAYLAAFQTKGYTAEEIAGLAKAMRDYAIKLE-LGEVADTAGTGGDGSSSINVSTASALILSAF-TKVAKHGNVSITSKSGSANVLEALGLNIKIPPEKARKMIEKTNFTFIFAPMYHPALKRIMPVRRELKVKTVFNILGP 171          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_PSEU5 (Anthranilate phosphoribosyltransferase OS=Pseudomonas stutzeri (strain A1501) GN=trpD PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 7.471e-31
Identity = 76/177 (42.94%), Postives = 105/177 (59.32%), Query Frame = 2
Query:  182 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDA-VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            E ++ ++ ++DLT  E QA +  ++  +  +A + AFL+ +R K ET  EIVG  + M + AA V    D  VD  GTGGDG N  N+ST AS + AA G KVAK             D+LEA GV +DL PE V R VD  G+GFM +  +H AMK+    R++L ++T+FNILGP
Sbjct:    5 EALNRIVGQLDLTTEEMQAVMRQIMTGQCTDAQVGAFLMGMRMKSETIDEIVGAVQVMRELAAPVRFDTDKLVDTCGTGGDGMNIFNVSTAASFVVAAAGGKVAKHGNRAVSGKSGSADLLEAAGVFLDLTPEQVARSVDTVGVGFMFAPAHHGAMKYAAGPRRELGLRTLFNILGP 181          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_POLNS (Anthranilate phosphoribosyltransferase OS=Polynucleobacter necessarius (strain STIR1) GN=trpD PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 7.471e-31
Identity = 76/178 (42.70%), Postives = 104/178 (58.43%), Query Frame = 2
Query:  182 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAA--KVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            E +   I   +L   E  A +  +++ E    L++  L+ LR K ET GEI   A+ M ++A   +V+     VD+VGTGGDGA+T NIST A  +AA  GAK+AK             DVLEALGV + L  + V +C+   G GFM +  +HPAMK V P+RK+L V+T+FNILGP
Sbjct:    7 EALQRCIEHRELFHDEMTAMMRLIMSGEMSPELVAGLLIALRTKKETVGEIAAAAQVMREFATSVQVDDRTHLVDVVGTGGDGAHTFNISTAAMFVAAGTGAKIAKHGNRSVSSKSGSADVLEALGVNLALSADQVAKCISTVGTGFMFAPNHHPAMKNVVPIRKQLGVRTIFNILGP 184          
The following BLAST results are available for this feature:
BLAST of CN186080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_PHOPR5.720e-3141.81Anthranilate phosphoribosyltransferase OS=Photobac... [more]
TRPD_METMP5.720e-3143.68Anthranilate phosphoribosyltransferase OS=Methanoc... [more]
TRPD_DIAST5.720e-3148.34Anthranilate phosphoribosyltransferase OS=Diaphoro... [more]
TRPD_ACISJ5.720e-3148.34Anthranilate phosphoribosyltransferase OS=Acidovor... [more]
TRPD_XANC57.471e-3149.01Anthranilate phosphoribosyltransferase OS=Xanthomo... [more]
TRPD_XANAC7.471e-3149.01Anthranilate phosphoribosyltransferase OS=Xanthomo... [more]
TRPD_THICR7.471e-3145.25Anthranilate phosphoribosyltransferase OS=Thiomicr... [more]
TRPD_PYRAB7.471e-3142.53Anthranilate phosphoribosyltransferase OS=Pyrococc... [more]
TRPD_PSEU57.471e-3142.94Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_POLNS7.471e-3142.70Anthranilate phosphoribosyltransferase OS=Polynucl... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002F09_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186080 ID=CN186080; Name=CN186080; organism=Citrus sinensis; type=EST; length=708bp
AGGGTTTCTTCCTCTCCATTTAATAATAATCACCCAAACCACCGGCCTTT
CTTACCGTCGCTTGGGAACTGTGGATTTACGACTGCGGGTAATAATCCGA
GATGCAGAGAATTAACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGAT
AGATACTCGTCCTCAAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGA
TAAGTCGAGTGGATTTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTAC
TTGTTGAATGAAGCTGATGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCT
CAGAGCCAAAGGAGAAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGA
TGATAAAGTATGCTGCGAAGGTGGAAGGGCTGGGTGATGCAGTTGACATT
GTGGGTACAGGAGGTGATGGTGCAAACACAGTGAACATTTCAACTGGTGC
TTCAATTCTTGCCGCAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTC
GGTCTAGTTCTTCTGCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGT
GTCGTTATTGACTTGGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGC
AGGAATTGGTTTCATGATGTCGACAAAGTATCACCCTGCAATGAAGTTTG
TCAGGCCAGTGAGGAAAAAGCTCAAAGTAAAAACTGTATTCAATATATTG
GGTCCTAT
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