CN186066
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186066 vs. ExPASy Swiss-Prot
Match: CUL4A_MOUSE (Cullin-4A OS=Mus musculus GN=Cul4a PE=2 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 1.318e-45 Identity = 99/215 (46.05%), Postives = 142/215 (66.05%), Query Frame = -2 Query: 149 LCEKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYREIEQATEIPASDLKRCLQSLACVRGKNVLRKEPMSKDIGEDDAFFVNDKFTSKFYKVKIGTVVAQKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLERDNVDRKLYRYLA 793 L E F+++YLG H+GR+L WQT +G A +KA F +G+K E VS +Q VL++FN D S+ EI+ AT I S+L+R LQSLAC + + VL K P K++ + D F N F K +++KI + KE+ E+ T +RV +DR+ QI+AAIVRIMK R+ L HN +++E+ QL +F P ++KKRIESLI+RD++ERD Y Y+A Sbjct: 550 LQEVFKTFYLGKHSGRKLQWQTTLGHAVLKADFKEGKK-EFQVSLFQTLVLLMFNEGDGFSFEEIKMATGIEDSELRRTLQSLACGKAR-VLIKSPKGKEVEDGDKFIFNADFKHKLFRIKINQ-IQMKETVEEQVSTTERVFQDRQYQIDAAIVRIMKMRKTLGHNLLVSELYNQL--KFPVKPGDLKKRIESLIDRDYMERDKDSPNQYHYVA 759
BLAST of CN186066 vs. ExPASy Swiss-Prot
Match: CUL1_ARATH (Cullin-1 OS=Arabidopsis thaliana GN=CUL1 PE=1 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.118e-36 Identity = 88/213 (41.31%), Postives = 129/213 (60.56%), Query Frame = -2 Query: 149 EKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYREIEQATEIPASDLKRCLQSLACVRGKNVLRKEPMSKDIGEDDAFFVNDKFTSKFYKVKIGTVVAQKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLERDNVDRKLYRYLA 787 E F+ +Y R+L+W ++G+ I F + + EL VSTYQ VL+LFN D+LSY EI + DL R L SL+C + K +L KEP +K + ++DAF N KFT + ++KI E+++ + V++DR+ I+AAIVRIMKSR+VL H +++E +QL F + IKKR+E LI RD+LERD + ++RYLA Sbjct: 533 EVFKGFYETKTKHRKLTWIYSLGTCHINGKFDQ-KAIELIVSTYQAAVLLLFNTTDKLSYTEILAQLNLSHEDLVRLLHSLSCAKYK-ILLKEPNTKTVSQNDAFEFNSKFTDRMRRIKIPLPPVD-----ERKKVVEDVDKDRRYAIDAAIVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 738
BLAST of CN186066 vs. ExPASy Swiss-Prot
Match: CUL4_SCHPO (Cullin-4 OS=Schizosaccharomyces pombe GN=cul4 PE=1 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 8.014e-35 Identity = 76/213 (35.68%), Postives = 133/213 (62.44%), Query Frame = -2 Query: 152 FRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNA---DRLSYREIEQATEIPASDLKRCLQSLACVRGKNVLRKEPMSKDIGEDDAFFVNDKFTSKFYKVKIGTVVAQKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLERDNVDRKLYRYL 781 F +YL G+++SW ++G +KA F G K EL++S +Q CVL+ FNN + +SY++++++TE+ DL R LQSL+C R + ++ P SK D F+VN+KFT K Y+VKI + KE E + +++V DR+ +++A+IVR+MK + + H++++ V ++ R + +++K IE L+E+++LER+ D +Y Y+ Sbjct: 526 FEKFYLSKQVGKKISWYASLGHCIVKARFPLGNK-ELSISLFQACVLLQFNNCLGGEGISYQDLKKSTELSDIDLTRTLQSLSCARIRPLVMV-PKSKKPSPDTMFYVNEKFTDKLYRVKINQIYL-KEERQENSDVQEQVVRDRQFELQASIVRVMKQKEKMKHDDLVQYVINNVKDRGIPLVSDVKTAIEKLLEKEYLERE--DNDIYTYV 733
BLAST of CN186066 vs. ExPASy Swiss-Prot
Match: CUL2_PONAB (Cullin-2 OS=Pongo abelii GN=CUL2 PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 5.743e-33 Identity = 78/213 (36.62%), Postives = 134/213 (62.91%), Query Frame = -2 Query: 149 EKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYREIEQATEIPASDLKRCLQSLACVRGKNVLRKEPMSKDIGEDDAFFVNDKFTSKFYKVKIGTVVAQKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLERDNVDRKLYRYLA 787 + F +Y +GR+L+W + + ++K + G+ + V+TYQM VL+ FNN++ +SY+E++ +T++ +L + ++SL V+ ++ + +DI + +F +N F+SK K KI T + QK++ E ++TR V+EDRK ++AAIVRIMK+R+VL HN +I EV Q ++RF + + IKK IE LI++ ++ER Y Y+A Sbjct: 538 QMFELFYSQHFSGRKLTWLHYLCTGEVKMNY-LGKPYVAMVTTYQMAVLLAFNNSETVSYKELQDSTQMNEKELTKTIKSLLDVK---MINHDSEKEDIDAESSFSLNMNFSSKRTKFKITTSM-QKDTPQEMEQTRSAVDEDRKMYLQAAIVRIMKARKVLRHNALIQEVISQSRARFNPSISMIKKCIEVLIDKQYIERSQASADEYSYVA 745
BLAST of CN186066 vs. ExPASy Swiss-Prot
Match: CUL2_HUMAN (Cullin-2 OS=Homo sapiens GN=CUL2 PE=1 SV=2) HSP 1 Score: 141.354 bits (355), Expect = 5.743e-33 Identity = 78/213 (36.62%), Postives = 134/213 (62.91%), Query Frame = -2 Query: 149 EKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYREIEQATEIPASDLKRCLQSLACVRGKNVLRKEPMSKDIGEDDAFFVNDKFTSKFYKVKIGTVVAQKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLERDNVDRKLYRYLA 787 + F +Y +GR+L+W + + ++K + G+ + V+TYQM VL+ FNN++ +SY+E++ +T++ +L + ++SL V+ ++ + +DI + +F +N F+SK K KI T + QK++ E ++TR V+EDRK ++AAIVRIMK+R+VL HN +I EV Q ++RF + + IKK IE LI++ ++ER Y Y+A Sbjct: 538 QMFELFYSQHFSGRKLTWLHYLCTGEVKMNY-LGKPYVAMVTTYQMAVLLAFNNSETVSYKELQDSTQMNEKELTKTIKSLLDVK---MINHDSEKEDIDAESSFSLNMNFSSKRTKFKITTSM-QKDTPQEMEQTRSAVDEDRKMYLQAAIVRIMKARKVLRHNALIQEVISQSRARFNPSISMIKKCIEVLIDKQYIERSQASADEYSYVA 745
BLAST of CN186066 vs. ExPASy Swiss-Prot
Match: CUL2_MOUSE (Cullin-2 OS=Mus musculus GN=Cul2 PE=1 SV=2) HSP 1 Score: 140.969 bits (354), Expect = 7.501e-33 Identity = 78/213 (36.62%), Postives = 134/213 (62.91%), Query Frame = -2 Query: 149 EKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYREIEQATEIPASDLKRCLQSLACVRGKNVLRKEPMSKDIGEDDAFFVNDKFTSKFYKVKIGTVVAQKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLERDNVDRKLYRYLA 787 + F +Y +GR+L+W + + ++K + G+ + V+TYQM VL+ FNN++ +SY+E++ +T++ +L + ++SL V+ ++ + +DI + +F +N F+SK K KI T + QK++ E ++TR V+EDRK ++AAIVRIMK+R+VL HN +I EV Q ++RF + + IKK IE LI++ ++ER Y Y+A Sbjct: 538 QMFELFYSQHFSGRKLTWLHYLCTGEVKMNY-LGKPYVAMVTTYQMAVLLAFNNSETVSYKELQDSTQMNEKELTKTIKSLLDVK---MINHDSEKEDIDAESSFSLNMSFSSKRTKFKITTSM-QKDTPQELEQTRSAVDEDRKMYLQAAIVRIMKARKVLRHNALIQEVISQSRARFNPSISMIKKCIEVLIDKQYIERSQASADEYSYVA 745
BLAST of CN186066 vs. ExPASy Swiss-Prot
Match: CUL4_DICDI (Cullin-4 OS=Dictyostelium discoideum GN=culD PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 6.350e-32 Identity = 85/247 (34.41%), Postives = 134/247 (54.25%), Query Frame = -2 Query: 149 EKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNA---DRLSYREIEQATEIPASDLKRCLQSLACVRGKNVLRKEPMS-------------------------------KDIGEDDAFFVNDKFTSKFYKVKIGTVVAQKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLERDNVDRKLYRYLA 787 E F +YL H G+ L WQ + +KA F +G+K EL+VS +Q +L LFN+ LS+R+I+ T + +LK+ L SL + +++K+ + K I E D F N KF+SK +K+K+ ++ Q+ E E Q+T + + DR+ Q++AAIVRIMK+R+ L HN +I+E+ L +F P ++KKRIE LIE+++L RD + +Y Y+A Sbjct: 560 EVFNKFYLSKHNGKTLKWQNALSYCVLKANFIQGKK-ELSVSLFQTIILYLFNDVIDGGELSFRDIQANTGLAIPELKKNLLSLCSSKSDILIQKKSSTSSNTSSNTSSNTSSSASGSASGGASGGATKTKVIDETDTFLFNSKFSSKLFKIKVNSIQIQETVE-ENQKTNENIISDRQYQVDAAIVRIMKTRKTLAHNLLISELVSLL--KFQPKPVDLKKRIEILIEKEYLCRDPENAMIYNYMA 802
BLAST of CN186066 vs. ExPASy Swiss-Prot
Match: CUL1_DICDI (Cullin-1 OS=Dictyostelium discoideum GN=culA PE=1 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.121e-28 Identity = 82/218 (37.61%), Postives = 128/218 (58.72%), Query Frame = -2 Query: 149 CEK-FRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQK--HELNVSTYQMCVLMLFNNADRLSYREIEQATEIPASDLKRCLQSLACVRGKNVLRKEPMS-KDIGEDDAFFVNDKFTSKFYKVKIGTVVAQKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLERDNVDRKLYRYLA 790 CE+ F+ +Y H+GR+L+W ++ ++K + + K + L STYQ+ VL+ FN + L+ EI+++T++ S LK L SLA + K +L P+ ++I + F +N +F +K K+ I V + E E + VEEDRK QI+AAIVRIMK R+ L H+ ++ EV QLQ+RF IKK I+ LIE+++L R + Y Y+A Sbjct: 556 CEQLFQKFYQNQHSGRKLNWLHHLSKGELKTKYLQTSKSGYTLQCSTYQIGVLLQFNQYETLTSEEIQESTQLIDSVLKGTLTSLA--KSKILLADPPLDDEEIAKTTKFSLNKQFKNKKTKIFINVPVLTQVKE-EIDSIHKTVEEDRKLQIQAAIVRIMKMRKQLAHSGLMTEVISQLQTRFNPKVNIIKKCIDILIEKEYLMRVEGKKDHYSYVA 770
BLAST of CN186066 vs. ExPASy Swiss-Prot
Match: CUL5_DICDI (Cullin-5 OS=Dictyostelium discoideum GN=culE PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.618e-27 Identity = 72/217 (33.18%), Postives = 122/217 (56.22%), Query Frame = -2 Query: 149 FRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYREIEQATEIPASDLKRCLQSLACVRGKNVLRKEPMSKDIGEDDAFFVNDKFTSKFYKVKIGTVVA---QKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLER---DNVDRKLYRYLA 781 F S+Y ++ GR L++ + AD+ + KG+ ++L + YQM +L++FN AD+++ I + + ++ L LA ++ + EP K+ D F VN KF+SK KV V K+SE ++ + Q +E++R +++AAIVRIMKS++ + HN++ E T Q+ F T IKK IE LI+++++ R DN + Y Y+A Sbjct: 536 FESFYKKSYQGRVLTFLYDFSRADVDSRQAKGKIYKLTTTAYQMAILLMFNGADKITRFLINDTIGLDETSIR--LPLLALIKTGIIECSEPSFKNWNNDTEFTVNSKFSSKKMKVSCNIAVQIGETKQSEGQQTVSEQEIEKERFFKLQAAIVRIMKSKKTMTHNDLTVETTTQVSKWFTPKITAIKKAIEYLIDQEYIRRTTDDNPSARKYEYMA 750
BLAST of CN186066 vs. ExPASy Swiss-Prot
Match: CUL1_SCHPO (Cullin-1 OS=Schizosaccharomyces pombe GN=cul1 PE=1 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.761e-27 Identity = 73/214 (34.11%), Postives = 123/214 (57.48%), Query Frame = -2 Query: 161 LCEKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQK--HELNVSTYQMCVLMLFNNADRLSYREIEQATEIPASDLKRCLQSLACVRGKNVLRKEPMSKDIGEDDAFF-VNDKFTSKFYKVKIGTVVAQKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLERDNVDRKLY 793 L E F++YY H GR+LSW ++ +IKA + VSTYQM VL+L+N+ D +Y E+ + T + L L ++ K +L + + +G+ ++ + +N+ F K +V++ + + E + E ET + +EEDRK +++AIVRIMK+RR L H ++ E Q++SRF ++IK+ I+ LIE+++LER D +Y Sbjct: 557 LYEGFQNYYYSCHNGRKLSWLFHLSKGEIKARINPQTNVTYVFQVSTYQMGVLLLYNHRDSYTYEELAKITGLSTDFLTGILNIF--LKAKVLLLGD--NDKLGDPNSTYKINENFRMKKIRVQLNLPI-RSEQKQESLETHKTIEEDRKLLLQSAIVRIMKARRTLKHVVLVKETIDQIKSRFTPKVSDIKQCIDMLIEKEYLERQGRDEYIY 765 The following BLAST results are available for this feature:
BLAST of CN186066 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN186066 ID=CN186066; Name=CN186066; organism=Citrus sinensis; type=EST; length=800bpback to top |