CN186066
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN186066 vs. ExPASy Swiss-Prot
Match: CUL4_CAEEL (Cullin-4 OS=Caenorhabditis elegans GN=cul-4 PE=1 SV=3) HSP 1 Score: 121.324 bits (303), Expect = 6.150e-27 Identity = 75/221 (33.94%), Postives = 125/221 (56.56%), Query Frame = -2 Query: 149 FRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYREIEQATEIPASDLKRCL----------QSLACVRGKNVLRKEPMSKDIGEDDAFFVNDKFTSKFYKVKIGTVVAQKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLERDNVDRKLYRYLA 781 ++ +Y H R + W + SA I A+F G K EL + YQ +L+LFN + + EI + T+I ++ + + + L V G +KE +++ +++ F VN KFT K +V+I V K + E +E ++ V DR+ +I+AA+VRIMK+R+ L+H ++ E+ +QL RF + +IKKR+ESLIER+++ RD + Y Y+A Sbjct: 624 YQDFYRVQHGNRNVKWHHGLASAVISASFRPGCKKELIATMYQTVILLLFNKCETWTVAEIVEHTKILEIEVVKNVLALLGGRDKPKVLQRVEGGGSEKKEGTVENL-KNEKFVVNSKFTEKRCRVRIAQVNI-KTAVEETKEVKEEVNSDRQYKIDAAVVRIMKARKQLNHQTLMTELLQQL--RFPVSTADIKKRLESLIEREYISRDPEEASSYNYVA 840
BLAST of CN186066 vs. ExPASy Swiss-Prot
Match: CUL1_PONAB (Cullin-1 OS=Pongo abelii GN=CUL1 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.515e-25 Identity = 70/217 (32.26%), Postives = 123/217 (56.68%), Query Frame = -2 Query: 149 EKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYREIEQATEIPASDLKRCLQSLACVRGKNVLRKEPMSK----DIGEDDAFFVNDKFTSKFYKVKIGTVVAQKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLERDNVDRKLYRYLA 787 ++F ++Y H+GR+L+W + ++ K ++ L ST+QM +L+ +N D + +++ +T+I L + LQ L ++ K ++ ++ + ++ D + + +K +V I V + E + E++ T + +EEDRK I+AAIVRIMK R+VL H ++ EV QL SRF IKK I+ LIE+++LER + ++ Y YLA Sbjct: 564 QRFTAFYASRHSGRKLTWLYQLSKGELVTNCFKN-RYTLQASTFQMAILLQYNTEDAYTVQQLTDSTQIKMDILAQVLQIL--LKSKLLVLEDENANVDEVELKPDTLIKLYLGYKNKKLRVNIN-VPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQLSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDTYSYLA 776
BLAST of CN186066 vs. ExPASy Swiss-Prot
Match: CUL1_MOUSE (Cullin-1 OS=Mus musculus GN=Cul1 PE=1 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.515e-25 Identity = 70/217 (32.26%), Postives = 123/217 (56.68%), Query Frame = -2 Query: 149 EKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYREIEQATEIPASDLKRCLQSLACVRGKNVLRKEPMSK----DIGEDDAFFVNDKFTSKFYKVKIGTVVAQKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLERDNVDRKLYRYLA 787 ++F ++Y H+GR+L+W + ++ K ++ L ST+QM +L+ +N D + +++ +T+I L + LQ L ++ K ++ ++ + ++ D + + +K +V I V + E + E++ T + +EEDRK I+AAIVRIMK R+VL H ++ EV QL SRF IKK I+ LIE+++LER + ++ Y YLA Sbjct: 564 QRFTAFYASRHSGRKLTWLYQLSKGELVTNCFKN-RYTLQASTFQMAILLQYNTEDAYTVQQLTDSTQIKMDILAQVLQIL--LKSKLLVLEDENANVDEVELKPDTLIKLYLGYKNKKLRVNIN-VPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQLSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDTYSYLA 776
BLAST of CN186066 vs. ExPASy Swiss-Prot
Match: CUL1_HUMAN (Cullin-1 OS=Homo sapiens GN=CUL1 PE=1 SV=2) HSP 1 Score: 116.701 bits (291), Expect = 1.515e-25 Identity = 70/217 (32.26%), Postives = 123/217 (56.68%), Query Frame = -2 Query: 149 EKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYREIEQATEIPASDLKRCLQSLACVRGKNVLRKEPMSK----DIGEDDAFFVNDKFTSKFYKVKIGTVVAQKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLERDNVDRKLYRYLA 787 ++F ++Y H+GR+L+W + ++ K ++ L ST+QM +L+ +N D + +++ +T+I L + LQ L ++ K ++ ++ + ++ D + + +K +V I V + E + E++ T + +EEDRK I+AAIVRIMK R+VL H ++ EV QL SRF IKK I+ LIE+++LER + ++ Y YLA Sbjct: 564 QRFTAFYASRHSGRKLTWLYQLSKGELVTNCFKN-RYTLQASTFQMAILLQYNTEDAYTVQQLTDSTQIKMDILAQVLQIL--LKSKLLVLEDENANVDEVELKPDTLIKLYLGYKNKKLRVNIN-VPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQLSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDTYSYLA 776
BLAST of CN186066 vs. ExPASy Swiss-Prot
Match: CUL6_CAEEL (Cullin-6 OS=Caenorhabditis elegans GN=cul-6 PE=1 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 4.408e-25 Identity = 71/218 (32.57%), Postives = 117/218 (53.67%), Query Frame = -2 Query: 149 SALCEKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYREIEQATEIPASDLKRCLQSLACVRGKNVLRKEPMSKDIGEDDAFF-VNDKFTSKFYKVKIGTVVAQKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLERDNVDRKLYRYLA 799 S + ++F ++Y +H GRRL+W + ++ + + +K+ V+ Q+C L LFN D + +I +A E+ A + SL V ++ + KD DA +N K+ +K +V + T + + ++ E + VE DRK +I+A IVRIMK+R+ L H +I E+ QL+SRF N IK IE LIE+ ++ R + +Y YLA Sbjct: 513 STILKEFDTFYNASHNGRRLNWAYSQCRGEVNSKAFE-KKYVFIVTASQLCTLYLFNEQDSFTIEQISKAIEMTAKSTSAIVGSLNPVIDPVLVVDKGNEKDGYPPDAVVSLNTKYANKKVRVDLTTAIKKATADRETDAVQNTVESDRKYEIKACIVRIMKTRKSLTHTLLINEIISQLKSRFTPNVQMIKICIEILIEQLYIRRSENEHNVYEYLA 729
BLAST of CN186066 vs. ExPASy Swiss-Prot
Match: CUL2_DICDI (Cullin-2 OS=Dictyostelium discoideum GN=culB PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 4.408e-25 Identity = 72/244 (29.51%), Postives = 129/244 (52.87%), Query Frame = -2 Query: 149 FRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYREIEQATEIPASDLKRCLQSLACVRGKNVLRKEPMSKDIGEDD---------------------------------AFFVNDKFTSKFYKVKIGTVVAQKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLERDNVDRKLYRYLA 781 F+ YY H GR+L+W ++ A+ K+ F K + ++ V+ +Q+ +L++FN + +S EI + T + ++L R LQSL + K ++ K+ I ++ + VN +++K KVK+ + + QKE+ + +ET + ++EDRK ++A+IVRIMK+R+ ++H ++I EV + + RF N IKK IE LIE++++ R + Y Y A Sbjct: 532 FQQYYSTQHQGRKLNWLHHLCKAEAKSFFAK-KSYDFQVTNFQLGILLIFNTQESVSLEEITKFTNLNENELSRTLQSL--IEAKILISKKKDQNSINNNNNNNNNNNNNGEGNNSLVDSANNMQPSSSSSSTQEYTVNSAYSNKRSKVKVSSSL-QKETPLQNEETYKGIDEDRKLYLQASIVRIMKARKTMNHVSLIQEVIEHSRLRFQPNIPMIKKCIEQLIEKEYITRAEGESDRYLYAA 771
BLAST of CN186066 vs. ExPASy Swiss-Prot
Match: CUL1_DROME (Cullin homolog 1 OS=Drosophila melanogaster GN=lin19 PE=1 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 9.190e-23 Identity = 68/214 (31.78%), Postives = 112/214 (52.34%), Query Frame = -2 Query: 149 KFRSYYLGTHTGRRLSWQTNM--GSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYREIEQATEIPASDLKRCLQSLACVRGKNVLRKEPMSKDIGEDDAFFVNDKFTSKFYKVKIGTVVAQKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLERDNVDRKLYRYLA 784 +F +Y H+GR+L+W M G + + L ST+QM VL+ FN+ + ++++ T+ +L + LQ L + VL + + + + +K ++ I + + E + E++ + +EEDRK I+AAIVRIMK R+ L+H N+I+EV QL +RF IKK I+ LIE+++LER + Y YLA Sbjct: 565 QFNEFYAARHSGRKLNWLYQMCKGELIMNVNRNNSSTYTLQASTFQMSVLLQFNDQLSFTVQQLQDNTQTQQENLIQVLQILLKAK---VLTSSDNENSLTPESTVELFLDYKNKKRRININQPL-KTELKVEQETVHKHIEEDRKLLIQAAIVRIMKMRKRLNHTNLISEVLNQLSTRFKPKVPVIKKCIDILIEKEYLERMEGHKDTYSYLA 774
BLAST of CN186066 vs. ExPASy Swiss-Prot
Match: CUL2_CAEEL (Cullin-2 OS=Caenorhabditis elegans GN=cul-2 PE=1 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 2.674e-22 Identity = 65/215 (30.23%), Postives = 116/215 (53.95%), Query Frame = -2 Query: 149 EKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYREIEQATEIPASDLKRCLQSLACVRGKNVLRKEPMSKDIGEDDAFFVNDKFTSKFYKVKIGTVVAQKESEPEKQETRQ--RVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLERDNVDRKLYRYLA 787 ++F +Y G H GR+L+W NM D++ T+ +++ + YQM L+ F D + ++I + + L + ++++ V +L + +++ D +N TSK K ++ K E E++ +V +DRK +E AIVRIMK+R+VL HN ++ E+ Q + RF + IKK IE LIE+ +++R + + + Y+YLA Sbjct: 569 QEFEKFYTGKHNGRKLTWLFNMSQGDVRLTY-LDKQYVAQMYVYQMAALLCFERRDAILVKDIGEEIGVSGDYLLKTIRTILDV---TLLTCD--DQNLTADSLVRLNMSMTSKRMKFRLQAPQVNKAVEKEQEAVANTFQVSQDRKYYMECAIVRIMKTRKVLKHNALVTEIMDQTKGRFSPDVPFIKKSIEDLIEKMYIQRTDQNDE-YQYLA 776
BLAST of CN186066 vs. ExPASy Swiss-Prot
Match: CUL1_CAEEL (Cullin-1 OS=Caenorhabditis elegans GN=cul-1 PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.957e-22 Identity = 68/223 (30.49%), Postives = 112/223 (50.22%), Query Frame = -2 Query: 149 SALCEKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYREIEQATEIPASDLKRCLQSLA---CVRGKNVLRKE---PMSKDIGEDDAFFVNDKFTSKFYKVKIGTVVAQKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLERDNVDRKLYRYLA 799 S E F +Y GRRL+W + +I +T +K+ +T QMC ++LFN D + +I AT++ + SL ++ L+KE PM+ + +N + +K +V + ++++ + + ++ VEEDRK I A IVRIMK+R+ + H ++ EV QL RF IK+ I SLIE++++ R + LY YLA Sbjct: 565 SKTIEIFGQFYNEKFNGRRLTWVYSQSRGEITST-AFPKKYVFTATTAQMCTMLLFNEQDSYTVEQIAAATKMDEKSAPAIVGSLIKNLVLKADTELQKEDEVPMTATVS------LNKAYMNKKVRVDLSKFTMKQDAVRDTENVQKNVEEDRKSVISACIVRIMKTRKRVQHQQLMTEVITQLSGRFKPKVEMIKRCIGSLIEKEYMLRTEGQKDLYEYLA 780
BLAST of CN186066 vs. ExPASy Swiss-Prot
Match: CUL3_YEAST (Cullin-3 OS=Saccharomyces cerevisiae GN=CUL3 PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 5.576e-20 Identity = 62/221 (28.05%), Postives = 109/221 (49.32%), Query Frame = -2 Query: 149 SALCEKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYREIEQATEIPASDLKRCLQSLACVRGKNVLRKEPMSKDIGEDDAFFVNDKFTSKFYKVKIGTVV----AQKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLERDNVDRKLYRYLA 799 S + F YY + R L W ++ +I F G +E++ S Y + +LF + + L+ EI + T IP D+K + S++ + +L+K S ++ F VN F+S KVK+ + +QK + + + ++ A IVRIMK+ L H ++ TK+ QSR P+ +K+ I+ LIE+++++R+ D Y YL+ Sbjct: 529 SQILAGFEGYYSLKYKERVLKWAHHLSVIEIGCQFNSGY-YEISFSVYAGVIFLLFEDYEELTLGEIYELTHIPIDDVKSLVMSMSTIPRCKILKKSSSSGNM----KFSVNYFFSSPNRKVKVPVIACPLPSQKSDNLATASSVDTYDNEIVMELSAIIVRIMKTEGKLSHQQLLERTTKRTQSRLSLTPSILKRSIQLLIEKEYIQRNADDPSYYHYLS 744 The following BLAST results are available for this feature:
BLAST of CN186066 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN186066 ID=CN186066; Name=CN186066; organism=Citrus sinensis; type=EST; length=800bpback to top |