DC900149

Overview
NameDC900149
Unique NameDC900149
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length793
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_PSEPK (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Pseudomonas putida (strain KT2440) GN=gpmI PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 7.659e-30
Identity = 83/197 (42.13%), Postives = 108/197 (54.82%), Query Frame = 2
Query:    2 NGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAP 592
            NG      +ET K+ HVTFF++G R   F+   EE + IPS    T+++QP+M A E+ +R  +AI  +RF  + VN  N DMVGHTG  EA V A +A D  V  I+DA++KVGG  L+TADHGN E M                Q  T+HT +PVP    G     +VK R     G LA+VA T + L G E P
Sbjct:  321 NGKTQLRIAETEKYAHVTFFFSGGREEPFEG--EERILIPSPKVATYDLQPEMSAPEVTDRIVEAIEQQRFDVIVVNYANGDMVGHTGVFEAAVKAVEALDTCVGRIVDALDKVGGEALITADHGNVEQMEDECTG----------QAHTAHTTEPVPFIYVG---KRNVKVR---EGGVLADVAPTMLKLLGLEKP 499          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_PSEPG (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Pseudomonas putida (strain GB-1) GN=gpmI PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.706e-29
Identity = 82/197 (41.62%), Postives = 108/197 (54.82%), Query Frame = 2
Query:    2 NGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAP 592
            NG      +ET K+ HVTFF++G R   F+   EE + IPS    T+++QP+M A ++ +R  +AI  +RF  + VN  N DMVGHTG  EA V A +A D  V  I+DA+EKVGG  L+TADHGN E M                Q  T+HT +PVP    G     ++K R     G LA+VA T + L G E P
Sbjct:  321 NGKTQLRIAETEKYAHVTFFFSGGREEPFEG--EERILIPSPKVATYDLQPEMNAPQVTDRIVEAIEQQRFDVIVVNYANGDMVGHTGVFEAAVKAVEALDTCVGRIVDALEKVGGEALITADHGNVEQMEDECTG----------QAHTAHTTEPVPFIYVG---KRNLKVR---DGGVLADVAPTMLQLLGLEKP 499          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_PSEPF (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Pseudomonas fluorescens (strain Pf0-1) GN=gpmI PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.706e-29
Identity = 80/199 (40.20%), Postives = 110/199 (55.28%), Query Frame = 2
Query:    2 NGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            NG      +ET K+ HVTFF++G R   F    EE + IPS    T+++QP+M A E+ +R  +AI ++R+  + VN  N DMVGH+G  EA V A +  D  V  I++A+EKVGG  L+TADHGN E M   +            Q  T+HT +PVP    G     D+K R     G LA+VA T + L G E P++
Sbjct:  320 NGKTQLRIAETEKYAHVTFFFSGGREEPFPG--EERILIPSPKVATYDLQPEMSAPEVTDRIVEAIENQRYDVIVVNYANGDMVGHSGVFEAAVKAVECLDTCVGRIVEALEKVGGEALITADHGNVEQMADESTG----------QAHTAHTTEPVPFIYVG---KRDLKVR---EGGVLADVAPTMLKLLGLEKPAE 500          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_PSEA6 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=gpmI PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.706e-29
Identity = 76/200 (38.00%), Postives = 113/200 (56.50%), Query Frame = 2
Query:    2 NGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGG-LANVAATFINLHGYEAPSD 598
            +G      SET KF HVTFF++G +   ++   EE + IPS    T+++QP+M + E+ ++  +AI S +F  +  N PN DMVGHTG+ +A V AC+A D  +  +++AI+KVGG  L+TADHGNAE M                Q  T+HT + VP    G         +T   +GG L++VA T ++L G E P++
Sbjct:  321 HGKTQLRISETEKFAHVTFFYSGGKEDLYEG--EERILIPSPKVATYDLQPEMNSTELTDKLVEAIESGKFDAIICNYPNGDMVGHTGNFDAAVKACEAVDTCIGRVVEAIKKVGGDCLITADHGNAEKMADETTG----------QAHTAHTSELVPFWHVGQ--------KTTARSGGTLSDVAPTMLHLMGMEQPAE 500          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_PSEE4 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Pseudomonas entomophila (strain L48) GN=gpmI PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.801e-29
Identity = 81/200 (40.50%), Postives = 109/200 (54.50%), Query Frame = 2
Query:    2 NGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGG-LANVAATFINLHGYEAPSD 598
            NG      +ET K+ HVTFF++G R   F+   EE + IPS    T+++QP+M A E+ +R  +AI  +RF  + VN  N DMVGHTG  EA V A +A D  V  I++A+ KVGG  L+TADHGN E M                Q  T+HT +PVP    G       K +  +  GG LA+VA T + L G E P++
Sbjct:  321 NGKTQLRIAETEKYAHVTFFFSGGREEPFEG--EERILIPSPKVATYDLQPEMNAPEVTDRIVEAIEQQRFDVIVVNYANGDMVGHTGVFEAAVKAVEALDSCVGRIVEALGKVGGEALITADHGNVEQMEDECTG----------QAHTAHTSEPVPFIYVG-------KRKVTVREGGVLADVAPTMLKLLGLEKPAE 501          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_CHLAD (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=gpmI PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 6.484e-29
Identity = 80/200 (40.00%), Postives = 109/200 (54.50%), Query Frame = 2
Query:    5 GVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVP-IAIGGPGL-PDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            G+R F  +ET K+ HVTFF NG R   F    E+   IPS    T++++P+M A E+ E   +AI S ++  + VN  N DMVGHTG I A + AC+A D  +  ++ AI + GG+ LV ADHGNAE M+     G            T+HT  P P   IGGPG   D ++ R+    G LA+VA T + L     P+D
Sbjct:  345 GMRQFHIAETEKYPHVTFFLNGGREEPFPG--EDRRLIPSPKVATYDLKPEMSAPEVTEALLQAITSDQYDFIVVNYANPDMVGHTGSIPAVIKACEAVDAGLARVVPAILERGGVALVIADHGNAEQMIDPETGGPH----------TAHTTNPAPCFLIGGPGYGKDTIRLRS---GGRLADVAPTLLELLELTPPAD 529          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_ROSDO (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=gpmI PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.464e-28
Identity = 73/198 (36.87%), Postives = 111/198 (56.06%), Query Frame = 2
Query:    5 GVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            G+R +  +ET K+ HVTFF NG     FD   E+ +   S    T+++QP+M + E+ + A  A +   +  + VN  N DMVGHTGD++A + AC+A D+ +  ++ A+EK GG  +VTADHGN + M+     G            T+HTL PVP+ +   G PD    R    +G LA++A T ++L G E+P +
Sbjct:  319 GLRQYRLAETEKYPHVTFFLNGGEEVSFDG--EDRLMPKSPDVATYDLQPEMSSKEVTD-AFVAAIEEGYDLIVVNYANPDMVGHTGDLQAAMKACEAVDQGLGRVLAALEKAGGAMIVTADHGNCDVMIDPETGGPH----------TAHTLNPVPVVV--VGAPDGATLR----DGRLADLAPTILHLMGLESPKE 497          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_PSEAE (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Pseudomonas aeruginosa GN=gpmI PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.464e-28
Identity = 76/200 (38.00%), Postives = 110/200 (55.00%), Query Frame = 2
Query:    2 NGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGG-LANVAATFINLHGYEAPSD 598
            +G      +ET K+ HVTFF++G R   ++   EE + IPS    T+++QP+M A E+ +R  +AI  +R+  + VN  N DMVGHTG  EA V A +  D  +  I++A++KVGG  L+TADHGN E M   +            Q  T+HT +PVP    G       K +  +  GG LA+VA T + L G E P++
Sbjct:  325 HGKTQLRIAETEKYAHVTFFFSGGREEPYEG--EERILIPSPKVATYDLQPEMSAPEVTDRIVEAIEQQRYDVIVVNYANGDMVGHTGVFEAAVKAVECLDTCMGRIVEALDKVGGEALITADHGNVEQMEDESTG----------QAHTAHTCEPVPFVYVG-------KRKLSIREGGVLADVAPTMLTLMGLEQPAE 505          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_PSEAB (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=gpmI PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.464e-28
Identity = 76/200 (38.00%), Postives = 110/200 (55.00%), Query Frame = 2
Query:    2 NGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGG-LANVAATFINLHGYEAPSD 598
            +G      +ET K+ HVTFF++G R   ++   EE + IPS    T+++QP+M A E+ +R  +AI  +R+  + VN  N DMVGHTG  EA V A +  D  +  I++A++KVGG  L+TADHGN E M   +            Q  T+HT +PVP    G       K +  +  GG LA+VA T + L G E P++
Sbjct:  325 HGKTQLRIAETEKYAHVTFFFSGGREEPYEG--EERILIPSPKVATYDLQPEMSAPEVTDRIVEAIEQQRYDVIVVNYANGDMVGHTGVFEAAVKAVECLDTCMGRIVEALDKVGGEALITADHGNVEQMEDESTG----------QAHTAHTCEPVPFVYVG-------KRKLSIREGGVLADVAPTMLTLMGLEQPAE 505          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_PSEA7 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Pseudomonas aeruginosa (strain PA7) GN=gpmI PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.464e-28
Identity = 76/200 (38.00%), Postives = 110/200 (55.00%), Query Frame = 2
Query:    2 NGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGG-LANVAATFINLHGYEAPSD 598
            +G      +ET K+ HVTFF++G R   ++   EE + IPS    T+++QP+M A E+ +R  +AI  +R+  + VN  N DMVGHTG  EA V A +  D  +  I++A++KVGG  L+TADHGN E M   +            Q  T+HT +PVP    G       K +  +  GG LA+VA T + L G E P++
Sbjct:  325 HGKTQLRIAETEKYAHVTFFFSGGREEPYEG--EERILIPSPKVATYDLQPEMSAPEVTDRIVEAIEQQRYDVIVVNYANGDMVGHTGVFEAAVKAVECLDTCMGRIVEALDKVGGEALITADHGNVEQMEDESTG----------QAHTAHTCEPVPFVYVG-------KRKLSIREGGVLADVAPTMLTLMGLEQPAE 505          
The following BLAST results are available for this feature:
BLAST of DC900149 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 274
Match NameE-valueIdentityDescription
GPMI_PSEPK7.659e-3042.132,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PSEPG1.706e-2941.622,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PSEPF1.706e-2940.202,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PSEA61.706e-2938.002,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PSEE43.801e-2940.502,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_CHLAD6.484e-2940.002,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_ROSDO2.464e-2836.872,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PSEAE2.464e-2838.002,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PSEAB2.464e-2838.002,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PSEA72.464e-2838.002,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionDC900149 VSS Citrus sinensis cDNA clone VS27V69 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900149 ID=DC900149; Name=DC900149; organism=Citrus sinensis; type=EST; length=793bp
TAATGGTGTCCGGACTTTTGCTTGCAGTGAGACTGTCAAGTTTGGACATG
TCACTTTCTTCTGGAATGGAAACCGCTCTGGGTATTTCGACTCGAATTTG
GAGGAATATGTGGAAATTCCTAGTGATTCTGGAATTACTTTCAATGTACA
GCCCAAGATGAAGGCTTTGGAGATTGCTGAAAGGGCAAAGAAGGCCATCC
TTAGTCGCAGGTTCCACCAGGTGCGTGTTAACCTACCAAATAGTGACATG
GTGGGGCACACGGGAGATATTGAGGCAACAGTGGTGGCATGCAAGGCTGC
TGATGAAGCTGTCAAGATAATCATTGATGCAATAGAGAAAGTTGGTGGAA
TATATCTTGTTACTGCAGATCATGGCAATGCTGAGGACATGGTCAAGAGG
AACAAATCTGGGGAGCCTCTTCTTAAGGATGGCAATATTCAAGTGCTCAC
GTCTCACACTCTTAAACCCGTTCCCATTGCAATCGGAGGTCCTGGACTGC
CAGATGATGTCAAGTTCCGCACAGATCTCCCTAATGGTGGGCTGGCCAAT
GTAGCAGCAACTTTTATCAATCTCCATGGATATGAGGCGCCTAGTGACTA
CGAGCCAAGTCTTATTGAAGTAACTGACGACTGAGAAGTAACTGACGACT
GGGCGAACAATGGATCGTCGCCTAGATTTTATAACTCCGGAGGAATTCCG
TTAAAACGTAAAACAATAAATTGAATTTTGGGGTCTTGAATTCATTTTGA
TACGCGTGCTGTTTTTCAGCTTACATTTCGATTGCTGTCTGTT
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