DC900149

Overview
NameDC900149
Unique NameDC900149
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length793
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_BACST (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Bacillus stearothermophilus GN=gpmI PE=1 SV=3)

HSP 1 Score: 114.775 bits (286), Expect = 5.680e-25
Identity = 71/199 (35.68%), Postives = 109/199 (54.77%), Query Frame = 2
Query:    2 NGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            +G+R    +ET K+ HVTFF +G R   F    E+ + I S    T++++P+M A E+ +   K I + ++  + +N  N DMVGH+G +E T+ A +A DE +  ++DAI   GGI ++TADHGNA+         E L  DG  Q  T+HT  PVP+ +   G    +K R     G L ++A T ++L G   P +
Sbjct:  324 HGLRQLRIAETEKYPHVTFFMSGGREEKFPG--EDRILINSPKVPTYDLKPEMSAYEVTDALLKEIEADKYDAIILNYANPDMVGHSGKLEPTIKAVEAVDECLGKVVDAILAKGGIAIITADHGNAD---------EVLTPDGKPQ--TAHTTNPVPVIVTKKG----IKLR---DGGILGDLAPTMLDLLGLPQPKE 502          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_VIBFM (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Vibrio fischeri (strain MJ11) GN=gpmI PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 7.419e-25
Identity = 70/191 (36.65%), Postives = 106/191 (55.50%), Query Frame = 2
Query:   26 SETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            SET K+ HVTFF+NG     F+    + V  P  +  T+++QP+M A E+ E+   AI S ++  +  N PN DMVGHTG  +ATV A ++ DE +  +++AI++V G  L+TADHGNAE M+     G          V T+HT  PVP+   G      ++F+     G L+++A T + L     P++
Sbjct:  330 SETEKYAHVTFFFNGGIEDEFEGEERQLVASPKVA--TYDLQPEMSAPELTEKLVAAIKSGKYDAIVCNFPNCDMVGHTGVYDATVKAVESLDECIGKVVEAIKEVDGQLLITADHGNAEMMIDPETGG----------VHTAHTNLPVPLIYVG---SKAIEFK---EGGKLSDLAPTMLALTDTAIPAE 502          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_PARDP (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Paracoccus denitrificans (strain Pd 1222) GN=gpmI PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 9.689e-25
Identity = 70/198 (35.35%), Postives = 107/198 (54.04%), Query Frame = 2
Query:    5 GVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            G+R F  +ET K+ HVTFF NG +    +   E+     S    T+++ P+M A E++ +  +AI    +  + VN  N DMVGHTG + A + AC+A D+ + ++++A+EK GG  +V ADHGN E  +     G            T+HT  PVP+ + G   P+  K R    NG LA+VA T ++L G + P +
Sbjct:  319 GLRQFRLAETEKYPHVTFFLNGGKETPEEG--EDRFMPASPKVATYDLAPEMAAPEVSAKLVEAI-EAGYDLIVVNYANPDMVGHTGSLPAAIRACEAVDKGLGMMLEALEKAGGAAVVIADHGNCETTIDPETGGPH----------TAHTTNPVPVIVFGG--PEGAKLR----NGRLADVAPTVLDLMGLDLPPE 497          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_METBU (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Methanococcoides burtonii (strain DSM 6242) GN=gpmI PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 9.689e-25
Identity = 73/198 (36.87%), Postives = 108/198 (54.55%), Query Frame = 2
Query:    5 GVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            G++    +ET K+ HVTFF+NG      +   EE   IPS    T++++P+M A E+ E   + I S ++  + +NL N DMVGH+G +EA V A +  D+ V  II AI++VGG  +V ADHGNAE MV+   + E        Q  T+HT  PV        +    + R +L  G L++VA T + + G E P +
Sbjct:  326 GIKQLRIAETEKYAHVTFFFNGGVEKQNEG--EERCLIPSPKVATYDLKPEMSAYEVTEELIERIGSGKYDVIVLNLANMDMVGHSGIMEAAVKAVEVVDDCVGKIITAIKEVGGEAMVMADHGNAEKMVEFCNNTER-------QCYTAHTSNPVRC------IYVTQEKRVELQKGRLSDVAPTILKIMGIEKPPE 508          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI2_METBF (2,3-bisphosphoglycerate-independent phosphoglycerate mutase 2 OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=gpmI2 PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 9.689e-25
Identity = 71/199 (35.68%), Postives = 108/199 (54.27%), Query Frame = 2
Query:    2 NGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            +G+     +ET K+ HVT+F NG     +    E+   IPS    T++++P+M A EI +   + I S ++  + +N  N DMVGHTG  EA V A +A D+ +  I++ +++ GG+ L+TADHGNAE+M+   K+GEP          T+HT  PV     G     ++K    L NG L +VA T + L G   P +
Sbjct:  335 HGLIQLRIAETEKYAHVTYFLNGGEEKRYKD--EDRCLIPSPKIATYDLKPEMSAYEITDEVIRRIQSGKYDVIVLNFANMDMVGHTGIFEAAVKAVEAVDKCIGRIVEVLKEKGGVALITADHGNAEEMIDL-KTGEP---------HTAHTSNPVKCIYFG---NSEIK---ALRNGKLCDVAPTILELLGIPKPQE 515          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_RHOBA (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Rhodopirellula baltica GN=gpmI PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.265e-24
Identity = 75/203 (36.95%), Postives = 104/203 (51.23%), Query Frame = 2
Query:    5 GVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGI-TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGP---GLPDDVKFRTDLPNGG-LANVAATFINLHGYEAPSD 598
            G+  F C+ET K+ HVTFF+N  R   F+   EE+   PS   + T++ +P+M A +I E+  K I S +   + VN  N DMVGHTG +EA + A +  D  V  ++DA    GG  +VTADHGN E M+     G            T+HT   VP+ +  P   G P        L  GG LA++A T + L G E P +
Sbjct:  349 GLHQFRCAETEKYPHVTFFFNDYRDNPFEE--EEWGMAPSPRDVSTYDQKPEMSAEDITEKVLKQIKSGKCDMIIVNYANGDMVGHTGVLEAAIKAVEKVDACVGRVVDATLAAGGSLVVTADHGNCEQMIDPETGGPH----------TAHTTYQVPLIVVDPEFVGKP--------LREGGRLADIAPTVLALMGLEVPPE 531          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_LAWIP (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=gpmI PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.265e-24
Identity = 66/198 (33.33%), Postives = 111/198 (56.06%), Query Frame = 2
Query:    5 GVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            G+     +ET K+ HVT+F++G R   F       V+ P D   T++++P+M  +E+ +R   A  S++F  +  NL N DMVGHTG+I+A++ A +A D  V  I  A+ +  G +++TADHGN E+M+  +KSG+P          T+H+  PVP+     G P ++K      +G L ++A T +++     P++
Sbjct:  320 GLLQLRIAETEKYAHVTYFFSGGREEVFTGEERILVQSPRDVA-TYDLKPEMSVMEVTDRLLTAWNSKKFSLIVCNLANPDMVGHTGNIKASISALEAVDNCVGRIEKAVAEQHGCFILTADHGNVEEML--DKSGQP---------QTAHSCNPVPLIAIYDGKPLNLK-----ESGKLGDIAPTILSIWDVSIPNE 500          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_CLOD6 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Clostridium difficile (strain 630) GN=gpmI PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.653e-24
Identity = 68/200 (34.00%), Postives = 108/200 (54.00%), Query Frame = 2
Query:    2 NGVRTFACSETVKFGHVTFFWNGNRSGYFDSNL-EEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            NG      +ET K+ HVTFF+NG   G  + N  EE + IPS    T++++P+M A E+ ++A   +   +F  + +N  N DMVGHTG IEA + A +  D  V  +ID I ++GG  ++TADHGNAE M+               + +T+H++ PVP  + G     + +    L  G L+++A T +++   E P +
Sbjct:  319 NGKTQLRAAETEKYAHVTFFFNG---GVEEPNKGEERLLIPSPKVATYDLKPEMSAYELTDKALDKLGEDKFDFIVLNFANPDMVGHTGSIEAAIKAVETVDTCVGKLIDKIVELGGSAIITADHGNAEYMLDPETG----------KTVTAHSINPVPFIVVG----QEYESAKLLDGGRLSDIAPTILDMMKLEKPEE 501          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_BACA2 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Bacillus amyloliquefaciens (strain FZB42) GN=gpmI PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.653e-24
Identity = 68/199 (34.17%), Postives = 109/199 (54.77%), Query Frame = 2
Query:    2 NGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            +G++    +ET K+ HVTFF +G R   F    EE + I S    T++++P+M A E+ +   K I + +   + +N  N DMVGH+G +E T+ A +A DE +  ++DAI   GG  ++TADHGNA+ ++   ++GEP          T+HT  PVP+ +   G+       T    G L ++A T ++L G E P +
Sbjct:  324 HGLKQLRIAETEKYPHVTFFMSGGREEEFPG--EERILINSPKVATYDLKPEMSAYEVKDALVKEIAADKHDAIILNFANPDMVGHSGMVEPTIKAIEAVDECLGEVVDAIIAKGGHAIITADHGNADILI--TETGEP---------HTAHTTNPVPVIVTKEGV-------TLREGGILGDLAPTLLDLLGVEKPKE 502          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_AGRT5 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=gpmI PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.653e-24
Identity = 70/199 (35.18%), Postives = 107/199 (53.77%), Query Frame = 2
Query:    5 GVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGI-TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            G+  F  +ET K+ HVTFF NG +    +  + E   +P    + T+++QP+M A E+ E+  + ++ + +  +  N  N DMVGHTGD++A + AC+A D  +  ++ A+EKVGG  LV ADHGN E MV     G            T+HT  PVP+ + G   P+  K    + +G LA+VA T + L     P +
Sbjct:  318 GLTQFRLAETEKYPHVTFFLNGGKE---EPEVGEDRFMPKSPKVATYDLQPEMSAAEVTEKFVE-VIGKGYDLIVTNYANPDMVGHTGDLQAAIKACEAVDRGLGAVVAALEKVGGAMLVIADHGNCETMVDPVTGGPH----------TAHTTNPVPVILFGG--PEGAK----VHDGILADVAPTLLQLMNVPLPPE 496          
The following BLAST results are available for this feature:
BLAST of DC900149 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 274
Match NameE-valueIdentityDescription
GPMI_BACST5.680e-2535.682,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_VIBFM7.419e-2536.652,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PARDP9.689e-2535.352,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_METBU9.689e-2536.872,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI2_METBF9.689e-2535.682,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_RHOBA1.265e-2436.952,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_LAWIP1.265e-2433.332,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_CLOD61.653e-2434.002,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_BACA21.653e-2434.172,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_AGRT51.653e-2435.182,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionDC900149 VSS Citrus sinensis cDNA clone VS27V69 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900149 ID=DC900149; Name=DC900149; organism=Citrus sinensis; type=EST; length=793bp
TAATGGTGTCCGGACTTTTGCTTGCAGTGAGACTGTCAAGTTTGGACATG
TCACTTTCTTCTGGAATGGAAACCGCTCTGGGTATTTCGACTCGAATTTG
GAGGAATATGTGGAAATTCCTAGTGATTCTGGAATTACTTTCAATGTACA
GCCCAAGATGAAGGCTTTGGAGATTGCTGAAAGGGCAAAGAAGGCCATCC
TTAGTCGCAGGTTCCACCAGGTGCGTGTTAACCTACCAAATAGTGACATG
GTGGGGCACACGGGAGATATTGAGGCAACAGTGGTGGCATGCAAGGCTGC
TGATGAAGCTGTCAAGATAATCATTGATGCAATAGAGAAAGTTGGTGGAA
TATATCTTGTTACTGCAGATCATGGCAATGCTGAGGACATGGTCAAGAGG
AACAAATCTGGGGAGCCTCTTCTTAAGGATGGCAATATTCAAGTGCTCAC
GTCTCACACTCTTAAACCCGTTCCCATTGCAATCGGAGGTCCTGGACTGC
CAGATGATGTCAAGTTCCGCACAGATCTCCCTAATGGTGGGCTGGCCAAT
GTAGCAGCAACTTTTATCAATCTCCATGGATATGAGGCGCCTAGTGACTA
CGAGCCAAGTCTTATTGAAGTAACTGACGACTGAGAAGTAACTGACGACT
GGGCGAACAATGGATCGTCGCCTAGATTTTATAACTCCGGAGGAATTCCG
TTAAAACGTAAAACAATAAATTGAATTTTGGGGTCTTGAATTCATTTTGA
TACGCGTGCTGTTTTTCAGCTTACATTTCGATTGCTGTCTGTT
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