DC900149

Overview
NameDC900149
Unique NameDC900149
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length793
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_BACAH (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Bacillus thuringiensis (strain Al Hakam) GN=gpmI PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.117e-23
Identity = 66/198 (33.33%), Postives = 106/198 (53.54%), Query Frame = 2
Query:    5 GVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            G++    +ET K+ HVTFF++G R   F    EE + I S    T++++P+M   E+ +     I + +   + +N  N DMVGH+G +E T+ A +A DE +  +++AI    G+ L+TADHGNA++  +    GEP         +T+HT  PVP  +      +DV+ R     G L ++A T + L G E P +
Sbjct:  324 GLKQLRIAETEKYPHVTFFFSGGREAEFPG--EERILINSPKVATYDLKPEMSIYEVTDALVNEIENDKHDVIILNFANCDMVGHSGMMEPTIKAVEATDECLGKVVEAILAKDGVALITADHGNADE--ELTSEGEP---------MTAHTTNPVPFIV----TKNDVELR---EGGILGDIAPTMLTLLGVEQPKE 501          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_ACIBL (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Acidobacteria bacterium (strain Ellin345) GN=gpmI PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.117e-23
Identity = 64/198 (32.32%), Postives = 101/198 (51.01%), Query Frame = 2
Query:    8 VRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDL-PNGGLANVAATFINLHGYEAPSD 598
            +R    +ET K+ HVT+F+NG     +     E V+ P  +  T++++P+M A  IA+  + A+    F  + VN  N+DMVGH+G I  T+ A +  D  +  + + + K GG  L+TADHGNAE M+     G            T+HT  PVP       + +D K R  L P+G L +++ T + + G   P +
Sbjct:  343 MRNLRVAETEKYAHVTYFFNGGIEKPYPGEERELVQSPKVA--TYDLKPEMSANGIADVIEHAVEKGAFDVIVVNFANADMVGHSGKIPPTITAVETVDSCLGRVYNVVRKKGGAMLITADHGNAEQMIDPETGGPQ----------TAHTTNPVPFIF----VAEDAKKRFSLRPDGALQDISPTMMGILGIPQPKE 524          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_WOLPM (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Wolbachia pipientis wMel GN=gpmI PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.071e-23
Identity = 71/200 (35.50%), Postives = 108/200 (54.00%), Query Frame = 2
Query:    2 NGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYL-VTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            N +R    +ET K+ HVTFF+N  +   F    EE + IPS    T+++QP+M A E+ E+  + I S+ F  + VN  N DMVGHTG+I+A   A  A D+ +  +++A++K     L VTADHGN E M            + N    T+HTL  VP  +      D++K R    +G L+++A T + L G + P++
Sbjct:  311 NKLRQLRIAETEKYAHVTFFFNCGKEEPFSG--EERILIPSPKVQTYDLQPEMSAFELTEKLVEKIHSQEFALIVVNYANPDMVGHTGNIKAAEKAVLAVDDCLAKVLNAVKKSSNTALIVTADHGNVECM----------FDEENNTPHTAHTLNKVPFIVS----CDNLKLR----DGRLSDIAPTILQLLGIKKPNE 490          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_CYAP4 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=gpmI PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.071e-23
Identity = 70/204 (34.31%), Postives = 107/204 (52.45%), Query Frame = 2
Query:    5 GVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVP-IAIGG-----PGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            G++    +ET K+ HVT+F+NG          E+ + +PS    T++  P M A ++ +    A+    +  V VN  N DMVGHTG ++AT+ A +A D  V  ++ ++ ++GG  L+TADHGNAE MV  ++ G P          T+HT  PVP I + G     PG   DV  R D   G LA++A T + +     P++
Sbjct:  320 GLKQLRVAETEKYAHVTYFFNGGIEDPLPG--EDRILVPSPMVATYDQAPAMSAAQVTQEVIAAVEKGVYSMVVVNYANPDMVGHTGQMKATIQALEAVDRCVGQLLQSVLQMGGTLLITADHGNAECMV--DEQGNP---------WTAHTTNPVPFILVEGEGVKIPGHGTDVALRDD---GCLADIAPTILEILRLPQPAE 507          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_CLOBL (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=gpmI PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.071e-23
Identity = 71/201 (35.32%), Postives = 110/201 (54.73%), Query Frame = 2
Query:    2 NGVRTFACSETVKFGHVTFFWNGNRSGYFDSNL-EEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGG-LANVAATFINLHGYEAPSD 598
            NG +    +ET K+ HVTFF+NG   G  + N  E+ V IPS    T+++QP+M A E+ ++  + +   ++  V +N  N DMVGHTG  EA   A +  DE V  I++ + +  G   +TADHGN+E+M+  + +G+P         +T+HT  PVP       + +D K   +L  GG LA++A T + L     PS+
Sbjct:  321 NGKKQLRIAETEKYAHVTFFFNG---GVEEPNEGEDRVLIPSPKVATYDMQPEMNAYEVTDKLLERLDEDKYDMVILNFANPDMVGHTGVFEAAKKAIETVDECVGKIVNKVLEKDGTAFITADHGNSEEMIDYS-TGKP---------MTAHTTNPVPFMY----VSNDSK---ELREGGKLADIAPTMLQLMNLPKPSE 501          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_CHRSD (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=gpmI PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.071e-23
Identity = 67/198 (33.84%), Postives = 105/198 (53.03%), Query Frame = 2
Query:    5 GVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            G++    +ET K+ HVTFF++G R   F+    E +  P D   T++ +P+M A E+ ++   AI +  +  +  N  N DMVGH+G+ +A V A +A D+ +  +I+AIE+ GG  LVTADHGNAE MV   ++G P          T+HT   VP+    P      +  T   +G L ++A T + +     P +
Sbjct:  334 GLKQLRIAETEKYAHVTFFFSGGREDEFEGEHRELIPSPQDVK-TYDEKPEMSAYELTDKLVAAIDAGTYDLIVCNYANGDMVGHSGNFDAAVKAIEAVDDCLGRVIEAIERAGGECLVTADHGNAEQMV-HPETGNP---------QTAHTTFQVPLIYVTPR-----QGATLADDGSLCDLAPTLLTMMHEPVPEE 515          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_RUTMC (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Ruthia magnifica subsp. Calyptogena magnifica GN=gpmI PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.316e-23
Identity = 65/198 (32.83%), Postives = 104/198 (52.53%), Query Frame = 2
Query:    5 GVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            G+     +ET K+ HVTFF NG     F  N E+ + IPS    T+++QP+M A E+ +   ++I S+++  +  N  N+DMVGH+G + AT+ A +  D  + II  A+  + G  L+TADHGNAE M+               +V T+HT  PVP+        D     ++   G L+++A T + +   E P++
Sbjct:  321 GMTQLRIAETEKYAHVTFFLNGGVEQAF--NGEDRILIPSPDVATYDLQPEMSAFELTDALIESIESQKYDLIICNFANTDMVGHSGKLNATIKAVETIDSCLGIIHKAMFAISGEILITADHGNAEQMINPKTH----------EVHTAHTNNPVPLIFVSERKAD----ISEPEKGALSDIAPTLLAMMDIEKPNE 502          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_MYCMS (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Mycoplasma mycoides subsp. mycoides SC GN=gpmI PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.316e-23
Identity = 74/211 (35.07%), Postives = 111/211 (52.61%), Query Frame = 2
Query:    5 GVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEE---------YVE-IPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDA-IEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSDYE 604
            G++    +ET K  HVTFF++G    YF + L +         Y++ IPS    T++++P+M A+EI ++  + I    F  + +N  N DMVGHTG+ +AT +ACK  DE +K I +  + +  GI ++TADHGNAE M+          KDG  QV   HT   VPI I       D+  +    +  +A VA T ++L   E P + E
Sbjct:  331 GLKQLRIAETEKIAHVTFFFDGGND-YFKNGLAKNDEITLANAYIDLIPSAKVATYDLKPQMSAVEITDKLLEEIKKDEFDFIVLNFANCDMVGHTGNNKATEIACKTLDEQLKRIHEEFVLRHNGIMVITADHGNAEIMID---------KDG--QVNKKHTTSLVPIII------TDLNIKLKQNDPEIAKVAPTILDLMNIEIPKEME 523          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_FRATN (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Francisella tularensis subsp. novicida (strain U112) GN=gpmI PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.316e-23
Identity = 68/191 (35.60%), Postives = 105/191 (54.97%), Query Frame = 2
Query:   26 SETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            +ET K+ HVTFF+NG R   F+   E+ + IPS    T+++QP+M A E+ ++   AI S ++  +  N  NSDMVGHTG+ EA + A +  D+ +  + DAI +  G   +TADHGNA DM+   ++ +P          T+HT   VP    G       K +  L +G L+++A T +N+ G   P +
Sbjct:  328 AETEKYPHVTFFFNGGREEQFEG--EDRILIPSPKVATYDLQPEMSAPEVTDKLVAAINSGKYDCIVCNYANSDMVGHTGNYEAAMQAIEYLDKCIARLKDAILEHDGNMFITADHGNA-DMMVNPETQKP---------HTAHTTNLVPFVYVG-----HKKAQVALEHGKLSDIAPTLLNVMGIAQPKE 501          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_DINSH (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Dinoroseobacter shibae (strain DFL 12) GN=gpmI PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.316e-23
Identity = 72/191 (37.70%), Postives = 98/191 (51.31%), Query Frame = 2
Query:    5 GVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVP-IAIGGPGLPDDVKFRTDLPNGGLANVAATFINL 574
            G+R F  +ET K+ HVTFF NG +        E+     S    T+++QP+M A E+++    AI    +  + VN  N DMVGHTGD+EA   AC A D  +   + A+E  GG  +VTADHGN E M+     G            T+HTL PVP I +GGP           L  G LA++A T ++L
Sbjct:  319 GLRQFRLAETEKYPHVTFFLNGGQET--PETGEDRFMPDSPKVATYDLQPEMSAEEVSDSFVAAI-EAGYDLIVVNYANPDMVGHTGDLEAAKAACTAVDTGLGRALAALEVAGGAMIVTADHGNCETMIDPETGG----------THTAHTLNPVPVILVGGPE-------GATLAPGRLADLAPTILHL 489          
The following BLAST results are available for this feature:
BLAST of DC900149 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 274
Match NameE-valueIdentityDescription
GPMI_BACAH3.117e-2333.332,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_ACIBL3.117e-2332.322,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_WOLPM4.071e-2335.502,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_CYAP44.071e-2334.312,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_CLOBL4.071e-2335.322,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_CHRSD4.071e-2333.842,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_RUTMC5.316e-2332.832,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_MYCMS5.316e-2335.072,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_FRATN5.316e-2335.602,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_DINSH5.316e-2337.702,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionDC900149 VSS Citrus sinensis cDNA clone VS27V69 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900149 ID=DC900149; Name=DC900149; organism=Citrus sinensis; type=EST; length=793bp
TAATGGTGTCCGGACTTTTGCTTGCAGTGAGACTGTCAAGTTTGGACATG
TCACTTTCTTCTGGAATGGAAACCGCTCTGGGTATTTCGACTCGAATTTG
GAGGAATATGTGGAAATTCCTAGTGATTCTGGAATTACTTTCAATGTACA
GCCCAAGATGAAGGCTTTGGAGATTGCTGAAAGGGCAAAGAAGGCCATCC
TTAGTCGCAGGTTCCACCAGGTGCGTGTTAACCTACCAAATAGTGACATG
GTGGGGCACACGGGAGATATTGAGGCAACAGTGGTGGCATGCAAGGCTGC
TGATGAAGCTGTCAAGATAATCATTGATGCAATAGAGAAAGTTGGTGGAA
TATATCTTGTTACTGCAGATCATGGCAATGCTGAGGACATGGTCAAGAGG
AACAAATCTGGGGAGCCTCTTCTTAAGGATGGCAATATTCAAGTGCTCAC
GTCTCACACTCTTAAACCCGTTCCCATTGCAATCGGAGGTCCTGGACTGC
CAGATGATGTCAAGTTCCGCACAGATCTCCCTAATGGTGGGCTGGCCAAT
GTAGCAGCAACTTTTATCAATCTCCATGGATATGAGGCGCCTAGTGACTA
CGAGCCAAGTCTTATTGAAGTAACTGACGACTGAGAAGTAACTGACGACT
GGGCGAACAATGGATCGTCGCCTAGATTTTATAACTCCGGAGGAATTCCG
TTAAAACGTAAAACAATAAATTGAATTTTGGGGTCTTGAATTCATTTTGA
TACGCGTGCTGTTTTTCAGCTTACATTTCGATTGCTGTCTGTT
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