DC900149

Overview
NameDC900149
Unique NameDC900149
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length793
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_ACAM1 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Acaryochloris marina (strain MBIC 11017) GN=gpmI PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.639e-22
Identity = 70/211 (33.18%), Postives = 113/211 (53.55%), Query Frame = 2
Query:    2 NGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVP-IAIGGPG--LP---DDVKFRTDLPNGGLANVAATFINLHGYEAPSDYEPSLI 616
            +G++    +ET K+ HVT+F+NG          E+ + +PS    T++  P M A ++ E A  A+  R +  + +N  N+DMVGHTG ++AT+ A +  D  +  +++ +  VGG  L+TADHGNAE M   +++G P          T+HT  PVP I + G G  +P    DV+ R D   G LA++A T +++     P +   S +
Sbjct:  321 HGLKQLRLAETEKYAHVTYFFNGGIEDPLPG--EDRILVPSPMVSTYDQDPPMSAAKVTEEAIAALDKRIYSLMVINYANTDMVGHTGMMDATIQAVETVDGCLGKLLNQVINVGGTLLITADHGNAERM--WDETGNP---------WTAHTTNPVPFILVEGEGRKIPAHGTDVQLRAD---GRLADIAPTILDILQLPKPEEMTGSTL 515          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_PROMT (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Prochlorococcus marinus (strain NATL2A) GN=gpmI PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.446e-22
Identity = 70/203 (34.48%), Postives = 108/203 (53.20%), Query Frame = 2
Query:    2 NGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVP-IAIGG-----PGLPDDVKFRTDLPNGGLANVAATFINLHGYEAP 592
            +G+  +  +ET K+ HVT+F NG         +   V  PS    T+++QP+M A E+ E   +AI +  +  V +N  N DMVGH+G ++A + A +  D  +  ++++I K+GG  L+TADHGN+E M+     G+P          T+HT  PVP I I G      G  +D+K R     GGLA++A T ++L     P
Sbjct:  329 HGLNQYRTAETEKYPHVTYFLNGGIEKPLKGEVRHLV--PSPRVATYDLQPEMSADELTESCIQAIDTGIYSLVVINFANPDMVGHSGIMKAAIKANEKVDSCIGKLLNSIGKLGGSLLITADHGNSEMMI--GPDGQP---------WTAHTTNPVPVILIEGEKRKLSGYGNDIKLRES--GGGLADLAPTLLHLLNLPKP 516          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_LISMO (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Listeria monocytogenes GN=gpmI PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.446e-22
Identity = 67/198 (33.84%), Postives = 105/198 (53.03%), Query Frame = 2
Query:    5 GVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            G+     +ET K+ HVTFF NG R+  F    E  + I S    T+++QP+M A E+ +   + I + +   + +N  N DMVGH+G +E T+ A +A DE +  ++D I + GG  ++ ADHGN+E M      G+P          T+HT  PVP+ +   G+       T    G LA+VA T ++L G + P++
Sbjct:  324 GLSQLRIAETEKYPHVTFFMNGGRNEEFPG--ENRILINSPKVETYDLQPEMSAYEVTDALVEDIKNDKHDAIILNFANPDMVGHSGMLEPTIKAIEAVDENLGRVVDLILEKGGSAIIFADHGNSETM--STPEGKP---------HTAHTTVPVPVIVTKKGV-------TLREGGRLADVAPTMLDLLGVKKPAE 501          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_LISMF (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=gpmI PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.446e-22
Identity = 67/198 (33.84%), Postives = 105/198 (53.03%), Query Frame = 2
Query:    5 GVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            G+     +ET K+ HVTFF NG R+  F    E  + I S    T+++QP+M A E+ +   + I + +   + +N  N DMVGH+G +E T+ A +A DE +  ++D I + GG  ++ ADHGN+E M      G+P          T+HT  PVP+ +   G+       T    G LA+VA T ++L G + P++
Sbjct:  324 GLSQLRIAETEKYPHVTFFMNGGRNEEFPG--ENRILINSPKVETYDLQPEMSAYEVTDALVEDIKNDKHDAIILNFANPDMVGHSGMLEPTIKAIEAVDENLGRVVDLILEKGGSAIIFADHGNSETM--STPEGKP---------HTAHTTVPVPVIVTKKGV-------TLREGGRLADVAPTMLDLLGVKKPAE 501          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_GRATL (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Gracilaria tenuistipitata var. liui GN=gpmI PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.446e-22
Identity = 64/198 (32.32%), Postives = 102/198 (51.52%), Query Frame = 2
Query:    5 GVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            G++    +ET K+ HVT+F+NG     F    E+   IPS    T+++ P+M A ++ E A  AI    +  + +N  N DMVGHTG+++AT+ A +  D+ +K I  A + +    ++T+DHGNA+ M+           D N +  TSH+  PVP  +  P        R    NG LA++A T + L     P++
Sbjct:  314 GLKQLRLAETEKYAHVTYFFNGGIEEPFAG--EDRQLIPSPKVETYDLDPEMSATKLTESAINAINKNTYKFIVINYANPDMVGHTGNLDATIHAIQKIDKCIKKIWLACQAMNSTLIITSDHGNADYML-----------DENNEPCTSHSTNPVPFILAEPTNIHTYHLR---KNGNLADIAPTILQLLNLNIPNE 495          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_CLOPS (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Clostridium perfringens (strain SM101 / Type A) GN=gpmI PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.446e-22
Identity = 67/199 (33.67%), Postives = 105/199 (52.76%), Query Frame = 2
Query:    5 GVRTFACSETVKFGHVTFFWNGNRSGYFDSNL-EEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            G+     +ET K+ HVTFF+NG   G    N  E+   I S    T++++P+M A E+ +   K +   ++  + +N  N DMVGHTG  EA V A +A DE +  + D + +  G   +TADHGNAE M+  + +G+P         +T+HT  PVP       +  D + ++    G LA++A T + + G E PS+
Sbjct:  322 GLNQLRIAETEKYAHVTFFFNG---GVEQPNTNEDRALIASPKVATYDLKPEMSAYEVTDELIKRLDEDKYDMIILNFANPDMVGHTGVQEAAVKAIEAVDECLGKVADKVLEKEGTLFITADHGNAEVMIDYS-TGKP---------MTAHTSDPVPFL----WISKDAEGKSLKDGGKLADIAPTMLTVMGLEVPSE 503          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_CLOB8 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=gpmI PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.446e-22
Identity = 69/198 (34.85%), Postives = 104/198 (52.53%), Query Frame = 2
Query:    5 GVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            G+     +ET K+ HVTFF+NG      ++  E+   IPS    T++++P+M A E+ +     + S ++  V +N  N DMVGHTG +EA V A +  DE V  I D I +  G   +TADHGNAE M+  + +G P          T+HT   VP       + +D + +  L NG LA++A T +   G E P++
Sbjct:  322 GLNQLRIAETEKYAHVTFFFNGGVEK--ENPGEDRKVIPSPKVATYDLKPEMSAYEVTDELLNRLDSDKYDMVILNFANPDMVGHTGVVEAAVKAIETVDECVGKIADKILEKNGCLFITADHGNAETMIDFS-TGNP---------YTAHTTHEVPFV----WVANDTEGK-KLSNGKLADIAPTMLVQLGLEVPTE 502          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_PORYE (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Porphyra yezoensis GN=gpmI PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.501e-22
Identity = 71/213 (33.33%), Postives = 108/213 (50.70%), Query Frame = 2
Query:    5 GVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPI--------AIGGPGLPDDVKFRTDLPNGGLANVAATFIN-LHGYEAPSDYEPSLI 616
            G++ F  SET K+ HVT+F+NG     F     E V  P  +  T+++ P M A  + +++  AI    +  + +N  N+DM+GHTG ++ T+ + +  D  +  ++DA+ K+ G  ++TADHGNAE M      G P          T+HT   VP+        AI G G    VK R    NG LA++A T ++ LH  + P     SLI
Sbjct:  323 GLKQFRVSETEKYAHVTYFFNGGAEEPFPGEDRELVSSPDVT--TYDLSPDMSAELVTQKSISAIKKAIYSCIVINYANADMLGHTGKLKETIQSIETVDRCITELLDAVSKLNGTLIITADHGNAECMF--TDEGNP---------CTAHTTNLVPLILIEGEQEAISGHG--GQVKLRN---NGSLADIAPTILDILHLKKPPEMTGKSLI 517          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_ONYPE (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Onion yellows phytoplasma GN=gpmI PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.878e-22
Identity = 67/198 (33.84%), Postives = 103/198 (52.02%), Query Frame = 2
Query:    5 GVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            G+     +ET K+ HVTFF++G +     +   + + IPS    T++++P+M ALEI   AK AILS ++  + +N  N DMVGHTG ++AT+ A +  D  +K +++AI  V G   + ADHGNAE M   +  G P          T+HT   VP  +    +         L  G L +VA T ++L   + P +
Sbjct:  325 GMHQLRIAETEKYPHVTFFFDGGKELQLKN--ADRILIPSPKVKTYDLKPEMSALEITTHAKTAILSGKYDTLILNFANPDMVGHTGFLDATIKAIQTVDSCLKEVLNAIFAVKGKACIVADHGNAEQMT--DNQGNP---------HTAHTTNLVPFIVTDKNVV--------LKPGSLCDVAPTMLDLLEIKKPQE 501          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_OCEIH (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Oceanobacillus iheyensis GN=gpmI PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.878e-22
Identity = 62/199 (31.16%), Postives = 109/199 (54.77%), Query Frame = 2
Query:    2 NGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            N +     +ET K+ HVTFF +G R   F    E+ + I S    T++++P+M   E+ +   K +     + + +N  N DMVGH+G ++ T+ A +A DE +  +ID I ++GG  ++TADHGN+++++         L+D   + +T+HT  PVP+ +      DD++ R     G LA+++ T ++L   E P +
Sbjct:  325 NNLNQLRIAETEKYPHVTFFMSGGREKEFPG--EKRILIDSPKVATYDLKPEMSVYEVTDALLKELDKGEQNAIILNFANPDMVGHSGKLQPTIDAIEAVDECLGKVIDKITELGGHAIITADHGNSDEVM--------TLED---KPMTAHTTNPVPVIV----TKDDIELR---DGGILADLSPTLLDLLNVEKPKE 503          
The following BLAST results are available for this feature:
BLAST of DC900149 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 274
Match NameE-valueIdentityDescription
GPMI_ACAM12.639e-2233.182,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PROMT3.446e-2234.482,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_LISMO3.446e-2233.842,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_LISMF3.446e-2233.842,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_GRATL3.446e-2232.322,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_CLOPS3.446e-2233.672,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_CLOB83.446e-2234.852,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PORYE4.501e-2233.332,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_ONYPE5.878e-2233.842,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_OCEIH5.878e-2231.162,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionDC900149 VSS Citrus sinensis cDNA clone VS27V69 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900149 ID=DC900149; Name=DC900149; organism=Citrus sinensis; type=EST; length=793bp
TAATGGTGTCCGGACTTTTGCTTGCAGTGAGACTGTCAAGTTTGGACATG
TCACTTTCTTCTGGAATGGAAACCGCTCTGGGTATTTCGACTCGAATTTG
GAGGAATATGTGGAAATTCCTAGTGATTCTGGAATTACTTTCAATGTACA
GCCCAAGATGAAGGCTTTGGAGATTGCTGAAAGGGCAAAGAAGGCCATCC
TTAGTCGCAGGTTCCACCAGGTGCGTGTTAACCTACCAAATAGTGACATG
GTGGGGCACACGGGAGATATTGAGGCAACAGTGGTGGCATGCAAGGCTGC
TGATGAAGCTGTCAAGATAATCATTGATGCAATAGAGAAAGTTGGTGGAA
TATATCTTGTTACTGCAGATCATGGCAATGCTGAGGACATGGTCAAGAGG
AACAAATCTGGGGAGCCTCTTCTTAAGGATGGCAATATTCAAGTGCTCAC
GTCTCACACTCTTAAACCCGTTCCCATTGCAATCGGAGGTCCTGGACTGC
CAGATGATGTCAAGTTCCGCACAGATCTCCCTAATGGTGGGCTGGCCAAT
GTAGCAGCAACTTTTATCAATCTCCATGGATATGAGGCGCCTAGTGACTA
CGAGCCAAGTCTTATTGAAGTAACTGACGACTGAGAAGTAACTGACGACT
GGGCGAACAATGGATCGTCGCCTAGATTTTATAACTCCGGAGGAATTCCG
TTAAAACGTAAAACAATAAATTGAATTTTGGGGTCTTGAATTCATTTTGA
TACGCGTGCTGTTTTTCAGCTTACATTTCGATTGCTGTCTGTT
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