DC900149

Overview
NameDC900149
Unique NameDC900149
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length793
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_SHELP (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=gpmI PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.218e-28
Identity = 74/200 (37.00%), Postives = 109/200 (54.50%), Query Frame = 2
Query:    2 NGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVP-IAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            NG      SET K+ HVTFF+NG +   F+   E+ + I S    T+++QP+M + E+ ++  +AI S ++  +  N PN DMVGHTG+ +A V AC+A D  +  +++A+ KV G  L+TADHGNAE M                Q  T+HT + VP I +G  G           PNG L+++A T + L G   PS+
Sbjct:  324 NGKTQLRISETEKYAHVTFFFNGGKEEPFEG--EDRILIQSPKVATYDLQPEMSSTELTDKLVEAIESTQYDVIICNYPNGDMVGHTGNFDAAVKACEAVDACIGRVVEALAKVDGECLITADHGNAEQMTDEQTG----------QAHTAHTSELVPLIYVGRKG--------EIAPNGRLSDLAPTMLTLMGQTVPSE 503          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_SHEHH (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Shewanella halifaxensis (strain HAW-EB4) GN=gpmI PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.218e-28
Identity = 71/192 (36.98%), Postives = 110/192 (57.29%), Query Frame = 2
Query:   26 SETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGG-LANVAATFINLHGYEAPSD 598
            SET K+ HVTFF+NG +   F    E+ + + S    T+++QP+M ++E+ ++  +AI S ++  +  N PN DMVGHTG+ +A V AC+A D  +  I++A+EKVGG  L+TADHGNAE M   +            Q  T+HT + VP+   G           ++  GG L+++A T + L G E P++
Sbjct:  332 SETEKYAHVTFFFNGGKEEPFKG--EDRILVQSPKVATYDLQPEMSSVELTDKLVEAIESTQYDVIICNYPNGDMVGHTGNFDAAVKACEAVDSCIGRIVEALEKVGGECLITADHGNAEQMTDESTG----------QAHTAHTSELVPLIYVGRD--------AEIEKGGRLSDLAPTMLTLMGQEVPAE 503          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_SHEAM (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=gpmI PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 4.203e-28
Identity = 74/199 (37.19%), Postives = 112/199 (56.28%), Query Frame = 2
Query:    2 NGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            +G      SET K+ HVTFF+NG +   FD   E+ + I S    T+++QP+M + E+ ++  +AI S ++  +  N PN DMVGHTG+ +A V AC+A D  +  ++DA+ KVGG  L+TADHGNAE M  R+ S          Q  T+HT + VP    G       +  +    G L+++A T +NL G + P++
Sbjct:  323 SGKTQLRISETEKYAHVTFFFNGGKEQPFDG--EDRILINSPKVATYDLQPEMSSTELTDKLVEAIESAKYDVIICNYPNGDMVGHTGNFDAAVKACEAVDTCIGRVVDALAKVGGECLITADHGNAEQM--RDPS--------TGQAHTAHTSELVPFIYVG-------RDASIAEGGRLSDIAPTMLNLMGQDIPAE 502          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_IDILO (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Idiomarina loihiensis GN=gpmI PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 5.489e-28
Identity = 79/192 (41.15%), Postives = 109/192 (56.77%), Query Frame = 2
Query:   26 SETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVP-IAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            SET K+ HVTFF++G R   F+   E+ V IPS    T+++QP+M + ++ +    AI S+ F  V  N PN DMVGHTG+ +A V AC+A D +V  ++ A+E VGG  L+TADHGNAE M                Q  T+HT + VP I +G P      K R    NG L++VA T ++L G E P +
Sbjct:  329 SETEKYAHVTFFFSGGREQEFEG--EKRVLIPSPKVKTYDLQPEMSSEQLTDELVAAIESQAFDVVICNYPNGDMVGHTGNFDAAVKACEAVDHSVGRVVSALEAVGGECLITADHGNAEQMSDATTG----------QAHTAHTNELVPFIYVGRP-----AKAR----NGRLSDVAPTILHLIGMEQPDE 499          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_PSESM (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Pseudomonas syringae pv. tomato GN=gpmI PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 7.169e-28
Identity = 79/200 (39.50%), Postives = 107/200 (53.50%), Query Frame = 2
Query:    2 NGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGG-LANVAATFINLHGYEAPSD 598
            NG      +ET K+ HVTFF++G R   F    EE + IPS    T+++QP+M A E+ ++   AI  +R+  + VN  N DMVGH+G +EA + A +  D  V  I DA+EKVGG  L+TADHGN E M            D   Q  T+HT +PVP    G       K +  +  GG LA+VA T + L G E P +
Sbjct:  320 NGKTQLRIAETEKYAHVTFFFSGGREEPFPG--EERILIPSPKVATYDLQPEMSAPEVTDKIVDAIEHQRYDVIIVNYANGDMVGHSGIMEAAIKAVEYLDVCVGRITDALEKVGGEALITADHGNVEQMT----------DDATGQAHTAHTSEPVPFVYVG-------KRQLKVREGGVLADVAPTMLQLLGMEKPQE 500          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_PSEU2 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=gpmI PE=3 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 9.363e-28
Identity = 78/200 (39.00%), Postives = 108/200 (54.00%), Query Frame = 2
Query:    2 NGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGG-LANVAATFINLHGYEAPSD 598
            NG      +ET K+ HVTFF++G R   F    EE + IPS    T+++QP+M A E+ ++   AI  +R+  + VN  N DMVGH+G +EA + A +  D  V  I +A+EKVGG  L+TADHGN E M            D   Q  T+HT +PVP    G       K +  +  GG LA+VA T ++L G E P +
Sbjct:  320 NGKTQLRIAETEKYAHVTFFFSGGREEPFPG--EERILIPSPKVATYDLQPEMSAPEVTDKIVDAIEHQRYDVIVVNYANGDMVGHSGIMEAAIKAVECLDVCVGRIAEALEKVGGEALITADHGNVEQMT----------DDSTGQAHTAHTSEPVPFVYVG-------KRQLKVRQGGVLADVAPTMLHLLGMEKPQE 500          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_PHOPR (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Photobacterium profundum GN=gpmI PE=3 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 9.363e-28
Identity = 75/198 (37.88%), Postives = 104/198 (52.53%), Query Frame = 2
Query:    5 GVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            G +    SET K+ HVTFF+NG     FD      V  P  +  T+++QP+M A E+ E+   AI    F  +  N PN DMVGHTG  +A V AC+A D  +  +++AI+ VGG  L+TADHGNAE M+     G          V T+HT  PVP+   G       K  T    G L+++A T ++L   E P++
Sbjct:  324 GKKQLRISETEKYAHVTFFFNGGVEDEFDGETRSLVASPKVA--TYDLQPEMSAPELTEKLVAAIKGGEFDTIICNYPNGDMVGHTGVYDAAVKACEALDGCIGQVVEAIKSVGGQLLITADHGNAEMMINPETGG----------VHTAHTNLPVPLIYVGD------KSLTLKDGGKLSDLAPTMLSLSDIEIPAE 503          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_SHEPA (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=gpmI PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.223e-27
Identity = 70/192 (36.46%), Postives = 107/192 (55.73%), Query Frame = 2
Query:   26 SETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGG-LANVAATFINLHGYEAPSD 598
            SET K+ HVTFF+NG +   F    E+ + I S    T+++QP+M + E+ ++   AI S  +  +  N PN DMVGHTG+ +A V AC+A D  +  +++A+EKVGG  L+TADHGNAE M   +            Q  T+HT + +P+   G           ++ NGG L+++A T + L G + P +
Sbjct:  332 SETEKYAHVTFFFNGGKEEPFKG--EDRILIQSPKVATYDLQPEMSSTELTDKLVAAIESTEYDVIICNYPNGDMVGHTGNFDAAVKACEAVDTCIGRVVEALEKVGGECLITADHGNAEQMTDESTG----------QAHTAHTSELIPLIYVGRD--------AEIENGGRLSDLAPTMLTLMGQDVPEE 503          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_THERP (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) GN=gpmI PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.086e-27
Identity = 76/200 (38.00%), Postives = 108/200 (54.00%), Query Frame = 2
Query:    5 GVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPD--DVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            G+R F  +ET K+ HVT+F+NG R   F    E+ + +PS    T++++P+M A E+ + A +AI+S+R+  V VN  N DMVGHTG   A V A +  D  +  I  A+  V G  +VTADHGNA++M          L  G  +V T+HT  PVP  +  P       V  RT    G LA+VA T + + G   P +
Sbjct:  326 GLRQFHTAETEKYAHVTYFFNGGREEPFPG--EDRLLVPSPKVPTYDLKPEMSAPEVTDAAVQAIVSQRYAFVLVNYANPDMVGHTGVFAAAVAAVECVDRCLGRIEQAVRSVNGYLVVTADHGNADEM----------LVPGTNEVWTAHTKNPVPFILVAPNHSPFRSVALRT---GGRLADVAPTILEIMGLPQPEE 510          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI2_METAC (2,3-bisphosphoglycerate-independent phosphoglycerate mutase 2 OS=Methanosarcina acetivorans GN=gpmI2 PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.086e-27
Identity = 76/198 (38.38%), Postives = 110/198 (55.56%), Query Frame = 2
Query:    5 GVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            G+     +ET K+ HVTFF NG +   +D   E+   IPS    T++++P+M A E+ +   + I S ++  + +N  N DMVGHTG  EA V A +A D  V  II+A++K GG+ L+TADHGNAE M +   +GEP          T+HT  PV     G G   +VK    L NG L+++A T ++L G   P +
Sbjct:  332 GLVQLRIAETEKYAHVTFFLNGGQEKCYDG--EDRCLIPSPKVATYDLKPEMSAYEVTDEVIRRIQSGKYDVIVLNFANMDMVGHTGIFEAAVQAVEAVDTCVGRIIEALKKAGGVALITADHGNAEQM-ENQHTGEP---------HTAHTSNPVRCIYAGKG---EVK---ALENGKLSDLAPTLLDLLGVPKPEE 511          
The following BLAST results are available for this feature:
BLAST of DC900149 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 274
Match NameE-valueIdentityDescription
GPMI_SHELP3.218e-2837.002,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SHEHH3.218e-2836.982,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SHEAM4.203e-2837.192,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_IDILO5.489e-2841.152,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PSESM7.169e-2839.502,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PSEU29.363e-2839.002,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PHOPR9.363e-2837.882,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SHEPA1.223e-2736.462,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_THERP2.086e-2738.002,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI2_METAC2.086e-2738.382,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionDC900149 VSS Citrus sinensis cDNA clone VS27V69 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900149 ID=DC900149; Name=DC900149; organism=Citrus sinensis; type=EST; length=793bp
TAATGGTGTCCGGACTTTTGCTTGCAGTGAGACTGTCAAGTTTGGACATG
TCACTTTCTTCTGGAATGGAAACCGCTCTGGGTATTTCGACTCGAATTTG
GAGGAATATGTGGAAATTCCTAGTGATTCTGGAATTACTTTCAATGTACA
GCCCAAGATGAAGGCTTTGGAGATTGCTGAAAGGGCAAAGAAGGCCATCC
TTAGTCGCAGGTTCCACCAGGTGCGTGTTAACCTACCAAATAGTGACATG
GTGGGGCACACGGGAGATATTGAGGCAACAGTGGTGGCATGCAAGGCTGC
TGATGAAGCTGTCAAGATAATCATTGATGCAATAGAGAAAGTTGGTGGAA
TATATCTTGTTACTGCAGATCATGGCAATGCTGAGGACATGGTCAAGAGG
AACAAATCTGGGGAGCCTCTTCTTAAGGATGGCAATATTCAAGTGCTCAC
GTCTCACACTCTTAAACCCGTTCCCATTGCAATCGGAGGTCCTGGACTGC
CAGATGATGTCAAGTTCCGCACAGATCTCCCTAATGGTGGGCTGGCCAAT
GTAGCAGCAACTTTTATCAATCTCCATGGATATGAGGCGCCTAGTGACTA
CGAGCCAAGTCTTATTGAAGTAACTGACGACTGAGAAGTAACTGACGACT
GGGCGAACAATGGATCGTCGCCTAGATTTTATAACTCCGGAGGAATTCCG
TTAAAACGTAAAACAATAAATTGAATTTTGGGGTCTTGAATTCATTTTGA
TACGCGTGCTGTTTTTCAGCTTACATTTCGATTGCTGTCTGTT
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