DC900149

Overview
NameDC900149
Unique NameDC900149
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length793
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_FRAP2 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=gpmI PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.878e-22
Identity = 66/191 (34.55%), Postives = 104/191 (54.45%), Query Frame = 2
Query:   26 SETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            +ET K+ HVTFF+NG +   F+   E+ + IPS    T+++QP+M A E+ ++   AI + ++  +  N  NSDMVGHTG+ EA + A +  D+ +  + DAI +  G   +TADHGNA DM+   K+ +P          T+HT   VP    G       K +  L +G L+++A T +N+     P +
Sbjct:  328 AETEKYPHVTFFFNGGKEDQFEG--EDRILIPSPKVATYDLQPEMSAPEVTDKLVDAINNGKYDCIVCNYANSDMVGHTGNYEAAMQAIEYLDKCLARLKDAILEHDGNMFITADHGNA-DMMVNPKTQKP---------HTAHTTNLVPFVYVG-----HKKAQVALEHGKLSDIAPTILNVMNIAQPQE 501          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_CLOAB (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Clostridium acetobutylicum GN=gpmI PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.878e-22
Identity = 68/202 (33.66%), Postives = 105/202 (51.98%), Query Frame = 2
Query:    5 GVRTFACSETVKFGHVTFFWNGNRSGYFDSNL-EEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTD---LPNGGLANVAATFINLHGYEAPSD 598
            G+     +ET K+ HVTFF+NG   G  + N  E+   I S    T++++P+M A E+ +   K +   ++  V +N  N DMVGHTG +EA   A +  DE +  I+D + K+ G   +TADHGN+E M+  + +G+P         +T+HT+ PVP           V   T+   L  G LA++A T +   G E P +
Sbjct:  322 GLNQLRIAETEKYAHVTFFFNG---GVEEPNKNEDRALISSPKVATYDLKPEMSAYEVTDELLKRLDEDKYDMVILNFANPDMVGHTGILEAAKKAVETVDECLGKIVDKVLKLDGSVFITADHGNSEQMIDYS-NGKP---------MTAHTVNPVPFVY--------VSNHTEAKKLNEGVLADIAPTMLQEMGLEKPEE 502          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_ANAVT (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=gpmI PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.878e-22
Identity = 69/196 (35.20%), Postives = 102/196 (52.04%), Query Frame = 2
Query:    5 GVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVP-IAIGG-----PGLPDDVKFRTDLPNGGLANVAATFINL 574
            G+  F  +ET K+ HVT+F+NG     F     E V  P  +  T++  P M A  + + A  AI    +  + +N  N DMVGHTG IE T+ A +  D  +  +++ + K GG  ++TADHGNAE M         L + GN    T+HT  PVP I + G     PG   +V+ R+D   G LA++A T +++
Sbjct:  320 GLNQFRTAETEKYAHVTYFFNGGLEEPFAGEDRELVSSPMVA--TYDKAPAMSATAVTDTAIAAIQKGIYSLIVINYANPDMVGHTGQIEPTIQAIETVDRCLGRLLEGVSKAGGTTIITADHGNAEYM---------LDEAGN--SWTAHTTNPVPLILVEGEKVKIPGYGTNVELRSD---GKLADIAPTILDI 499          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_ANASP (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Anabaena sp. (strain PCC 7120) GN=gpmI PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.878e-22
Identity = 69/196 (35.20%), Postives = 102/196 (52.04%), Query Frame = 2
Query:    5 GVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVP-IAIGG-----PGLPDDVKFRTDLPNGGLANVAATFINL 574
            G+  F  +ET K+ HVT+F+NG     F     E V  P  +  T++  P M A  + + A  AI    +  + +N  N DMVGHTG IE T+ A +  D  +  +++ + K GG  ++TADHGNAE M         L + GN    T+HT  PVP I + G     PG   +V+ R+D   G LA++A T +++
Sbjct:  320 GLNQFRTAETEKYAHVTYFFNGGLEEPFAGEDRELVSSPMVA--TYDKAPAMSATAVTDTAIAAIQKGIYSLIVINYANPDMVGHTGQIEPTIKAIETVDRCLGRLLEGVSKAGGTTIITADHGNAEYM---------LDEAGN--SWTAHTTNPVPLILVEGEKVKIPGYGTNVELRSD---GKLADIAPTILDI 499          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_THIDA (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=gpmI PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.003e-21
Identity = 63/198 (31.82%), Postives = 101/198 (51.01%), Query Frame = 2
Query:    5 GVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            G+R    +ET K+ HVTFF+NG     F    E+ + + S    T++++P+M A E+ E+   AI S+++  +  N  N DMVGHTG++EA + A +  D  +  +++A    GG  L+TADHGNAE M+               Q  T+HT+  VP+   G       +  +    G L +V+ T + + G   P +
Sbjct:  324 GLRQLRIAETEKYPHVTFFFNGGEEVSFPG--EDRILVSSPDVATYDLKPEMSAFEVTEKLLAAIGSKQYDLIVCNYANPDMVGHTGNLEAAIKAIETVDTCLGRVVEAQLARGGEVLITADHGNAELMLDAETG----------QAHTAHTMNLVPVIFVGR------RHASLAETGALEDVSPTLLRMMGLPQPPE 503          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_LISIN (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Listeria innocua GN=gpmI PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.003e-21
Identity = 66/198 (33.33%), Postives = 105/198 (53.03%), Query Frame = 2
Query:    5 GVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            G+     +ET K+ HVTFF NG R+  F    E  + I S    T++++P+M A E+ +   + I + +   + +N  N DMVGH+G +E T+ A +A DE +  ++D I + GG  ++ ADHGN+E M      G+P          T+HT  PVP+ +   G+       T    G LA+VA T ++L G + P++
Sbjct:  324 GLSQLRIAETEKYPHVTFFMNGGRNEEFPG--ENRILINSPKVETYDLKPEMSAYEVTDALVEDIKNDKHDAIILNFANPDMVGHSGMLEPTIKAIEAVDENLGRVVDLILEKGGSAIIFADHGNSETM--STPEGKP---------HTAHTTVPVPVIVTKKGV-------TLREGGRLADVAPTMLDLLGVKKPAE 501          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_HERA2 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) GN=gpmI PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.003e-21
Identity = 68/195 (34.87%), Postives = 99/195 (50.77%), Query Frame = 2
Query:    5 GVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGG-LANVAATFINLHGYE 586
            G R +  +ET K+ HVTFF NG R   F    E+ V   S    T+++QP+M A E+A +   A+ S+ +  + VN  N DMVGHTG I A V AC+  D  +  ++ A+   GG  ++ ADHGNAE M+     G            T+HT   VP  +         + +  L  GG LA++A T ++L G +
Sbjct:  346 GKRQYHSAETEKYPHVTFFLNGRREEPFAG--EDRVMAASPKVATYDLQPEMSAEEVAAKLLDAVNSQIYDFLVVNFANPDMVGHTGVIPAVVKACETVDRCLGQVVPAVVAQGGAAILIADHGNAEQMIDPQTGGPH----------TAHTTNLVPCILVADPATGLTREQISLRAGGRLADLAPTILDLLGLQ 528          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_STAES (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=gpmI PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.309e-21
Identity = 58/199 (29.15%), Postives = 106/199 (53.27%), Query Frame = 2
Query:    2 NGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            NG++    +ET K+ HVT+F +G R+  F+      ++ P  +  T++++P+M A E+ +   + +       + +N  N DMVGH+G +E T+ A +A DE +  ++D I  +GG  ++TADHGN++ ++  +            Q +T+HT  PVP+ +   G+       T    G L ++A T ++L   + PS+
Sbjct:  318 NGLKQLRIAETEKYPHVTYFMSGGRNEEFEGERRRLIDSPKVA--TYDLKPEMSAYEVKDALLEELDKGDLDLILLNFANPDMVGHSGMLEPTIKAIEAVDECLGEVVDKIIDMGGHAIITADHGNSDQVLTDDD-----------QPMTTHTTNPVPVIVTKEGV-------TLRETGRLGDLAPTLLDLLNVKQPSE 496          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_STAEQ (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=gpmI PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.309e-21
Identity = 58/199 (29.15%), Postives = 106/199 (53.27%), Query Frame = 2
Query:    2 NGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            NG++    +ET K+ HVT+F +G R+  F+      ++ P  +  T++++P+M A E+ +   + +       + +N  N DMVGH+G +E T+ A +A DE +  ++D I  +GG  ++TADHGN++ ++  +            Q +T+HT  PVP+ +   G+       T    G L ++A T ++L   + PS+
Sbjct:  318 NGLKQLRIAETEKYPHVTYFMSGGRNEEFEGERRRLIDSPKVA--TYDLKPEMSAYEVKDALLEELDKGDLDLILLNFANPDMVGHSGMLEPTIKAIEAVDECLGEVVDKIIDMGGHAIITADHGNSDQVLTDDD-----------QPMTTHTTNPVPVIVTKEGV-------TLRETGRLGDLAPTLLDLLNVKQPSE 496          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_RHOSK (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=gpmI PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.309e-21
Identity = 68/200 (34.00%), Postives = 99/200 (49.50%), Query Frame = 2
Query:    2 NGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVP-IAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            +G+R F  +ET K+ HVTFF NG R        E+     S    T+++QP+M A ++++   +AI    +  + VN  N DMVGHTGD++A + A +  D  +   ++A+   GG  +VTADHGN E MV     G            T+HT  PVP I + GP           L  G LA++A T + L     P +
Sbjct:  318 HGLRQFRIAETEKYPHVTFFLNGGREA--PETGEDRYMANSPKVATYDLQPEMSAPDVSDHLVEAI-GAGYDLIVVNYANPDMVGHTGDLKAAMAAVEEVDRGLGRAVEAVTTAGGAMIVTADHGNCETMVDPETGGPH----------TAHTTNPVPVILVNGPA-------GARLHAGRLADLAPTLLQLMQLPQPEE 497          
The following BLAST results are available for this feature:
BLAST of DC900149 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 274
Match NameE-valueIdentityDescription
GPMI_FRAP25.878e-2234.552,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_CLOAB5.878e-2233.662,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_ANAVT5.878e-2235.202,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_ANASP5.878e-2235.202,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_THIDA1.003e-2131.822,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_LISIN1.003e-2133.332,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_HERA21.003e-2134.872,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_STAES1.309e-2129.152,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_STAEQ1.309e-2129.152,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_RHOSK1.309e-2134.002,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionDC900149 VSS Citrus sinensis cDNA clone VS27V69 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900149 ID=DC900149; Name=DC900149; organism=Citrus sinensis; type=EST; length=793bp
TAATGGTGTCCGGACTTTTGCTTGCAGTGAGACTGTCAAGTTTGGACATG
TCACTTTCTTCTGGAATGGAAACCGCTCTGGGTATTTCGACTCGAATTTG
GAGGAATATGTGGAAATTCCTAGTGATTCTGGAATTACTTTCAATGTACA
GCCCAAGATGAAGGCTTTGGAGATTGCTGAAAGGGCAAAGAAGGCCATCC
TTAGTCGCAGGTTCCACCAGGTGCGTGTTAACCTACCAAATAGTGACATG
GTGGGGCACACGGGAGATATTGAGGCAACAGTGGTGGCATGCAAGGCTGC
TGATGAAGCTGTCAAGATAATCATTGATGCAATAGAGAAAGTTGGTGGAA
TATATCTTGTTACTGCAGATCATGGCAATGCTGAGGACATGGTCAAGAGG
AACAAATCTGGGGAGCCTCTTCTTAAGGATGGCAATATTCAAGTGCTCAC
GTCTCACACTCTTAAACCCGTTCCCATTGCAATCGGAGGTCCTGGACTGC
CAGATGATGTCAAGTTCCGCACAGATCTCCCTAATGGTGGGCTGGCCAAT
GTAGCAGCAACTTTTATCAATCTCCATGGATATGAGGCGCCTAGTGACTA
CGAGCCAAGTCTTATTGAAGTAACTGACGACTGAGAAGTAACTGACGACT
GGGCGAACAATGGATCGTCGCCTAGATTTTATAACTCCGGAGGAATTCCG
TTAAAACGTAAAACAATAAATTGAATTTTGGGGTCTTGAATTCATTTTGA
TACGCGTGCTGTTTTTCAGCTTACATTTCGATTGCTGTCTGTT
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