DC900149

Overview
NameDC900149
Unique NameDC900149
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length793
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_RHOS1 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=gpmI PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.309e-21
Identity = 68/200 (34.00%), Postives = 99/200 (49.50%), Query Frame = 2
Query:    2 NGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVP-IAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            +G+R F  +ET K+ HVTFF NG R        E+     S    T+++QP+M A ++++   +AI    +  + VN  N DMVGHTGD++A + A +  D  +   ++A+   GG  +VTADHGN E MV     G            T+HT  PVP I + GP           L  G LA++A T + L     P +
Sbjct:  318 HGLRQFRIAETEKYPHVTFFLNGGREA--PETGEDRYMANSPKVATYDLQPEMSAPDVSDHLVEAI-GAGYDLIVVNYANPDMVGHTGDLKAAMAAVEEVDRGLGRAVEAVTTAGGAMIVTADHGNCETMVDPETGGPH----------TAHTTNPVPVILVNGPA-------GARLHAGRLADLAPTLLQLMQLPQPEE 497          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_CHRVO (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Chromobacterium violaceum GN=gpmI PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.309e-21
Identity = 66/199 (33.17%), Postives = 104/199 (52.26%), Query Frame = 2
Query:    5 GVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVP-IAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            G++    +ET K+ HVT+F+NG     +    E+ + +PS    T+++QP+M A E+ ++   AI S ++  +  N  N DMVGH+G  +A V A +A D  ++  +DA+   GG  L+TADHGN E M      GE      + Q  T HT   VP + IG P      K R     G L +++ + + + G E P++
Sbjct:  319 GLKQLRIAETEKYPHVTYFFNGGEEQVYPG--EDRILVPSPKVATYDLQPEMSAGEVTDKIVAAIQSGQYQAIFCNYANGDMVGHSGVFDAAVKAVEALDGCIERCVDAMLAAGGEVLITADHGNCEQMY----DGE------HHQPHTQHTTNQVPFLYIGRP-----AKIRA---GGSLRDISPSLLAMMGLEQPAE 497          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_BACME (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Bacillus megaterium GN=gpmI PE=3 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 1.309e-21
Identity = 65/191 (34.03%), Postives = 100/191 (52.36%), Query Frame = 2
Query:    2 NGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINL 574
            N ++    +ET K+ HVTFF +G R   F    E  + I S    T++++P+M A E+ +     I   +   + +N  N DMVGH+G +E TV A +  DE +  I+DAI   GG  ++TADHGNA++++     G P         +T+HT  PVP+ +   GL    + R D   G L ++A T + L
Sbjct:  324 NNLKQLRIAETEKYPHVTFFMSGGREAEFPG--ETRILIDSPKVATYDLKPEMSAYEVTDALLAEIEGDKQDAILLNFANPDMVGHSGMLEPTVKAIETVDECLGKIVDAILAKGGTAIITADHGNADEVI--TLEGNP---------MTAHTTNPVPVIVTKQGL----ELRED---GILGDLAPTMLTL 494          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_ACIAD (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Acinetobacter sp. (strain ADP1) GN=gpmI PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.309e-21
Identity = 69/194 (35.57%), Postives = 103/194 (53.09%), Query Frame = 2
Query:   26 SETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGG-LANVAATFINLHGYEAPSDYE 604
            +ET K+ HVTFF++G R   +    E+ + IPS +  T++++P+M A E+ ++   AI S  F  + VN  N DMVGHTG  +A V A +A D  +  +  A+    G  ++TADHGN E M +  +SG         QV T HT + VP    GP        +  +  GG LA+VA T +NL     P++ +
Sbjct:  332 AETEKYAHVTFFFSGGREDEYPG--EKRILIPSPNVATYDLKPEMSAYEVTDQLVNAIDSGEFDLLVVNYANGDMVGHTGIFDAAVKAVEAVDTCLGRVYQAVMAKHGHMIITADHGNVEQM-QDYQSG---------QVHTQHTTELVPFIYVGP-------TQAVIAEGGVLADVAPTLLNLMQLPVPAEMQ 506          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_PROM3 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Prochlorococcus marinus (strain MIT 9303) GN=gpmI PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.710e-21
Identity = 67/197 (34.01%), Postives = 100/197 (50.76%), Query Frame = 2
Query:    2 NGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGG------PGLPDDVKFRTDLPNGGLANVAATFINL 574
            +G+R +  +ET K+ HVT+F NG          EE   +PS    T+++ P M A  + E   KAI S  +  V +N  N DMVGHTG + A   A    D  +  ++D+  ++GG  L+TADHGNAE           L++  + Q  T+HT  PVP+ +         G  +D++ R     GGLA++A T + L
Sbjct:  329 HGLRQYRTAETEKYPHVTYFMNGGIEQPLAG--EERHLVPSPRVATYDLAPAMSADTLTESCVKAIESGVYSLVIINYANPDMVGHTGVMGAAQEAISTVDRCIGRLLDSTGRMGGTLLITADHGNAE-----------LMQGSDGQAWTAHTTNPVPVILVEGEKRKLSGYGNDIQLRA---GGGLADIAPTLLQL 509          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_PORPU (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Porphyra purpurea GN=gpmI PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.710e-21
Identity = 65/204 (31.86%), Postives = 105/204 (51.47%), Query Frame = 2
Query:    5 GVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVP-IAIGG-----PGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            G++ F  +ET K+ HVT+F+NG     F     E V  PS +  T+++ P M A  + +++  AI    +  + +N  N+DM+GHTG ++ T+ + +  D  + ++ DA+ +  G  ++TADHGNAE M+    +             TSHT   VP I I G      G    V+FR    NG LA+VA T +++   + P +
Sbjct:  323 GLKQFRVAETEKYAHVTYFFNGGAEEPFSGEDRELVSSPSVT--TYDLSPDMSAELVTQKSISAINKGIYSCIVINYANADMLGHTGKLKETIRSIETVDNCIALLFDAVSQSNGTLIITADHGNAECMLTNEGTS-----------CTSHTTNLVPFILIEGEQATISGHGGQVEFR---KNGSLADVAPTILDILNLKKPPE 510          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_DESAP (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Desulforudis audaxviator (strain MP104C) GN=gpmI PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.710e-21
Identity = 68/199 (34.17%), Postives = 103/199 (51.76%), Query Frame = 2
Query:    2 NGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            +G+R    +ET K+ HVTFF+NG          E+ + IPS    T++++P+M A E+ +     I   ++  + +N  N DMVGHTGD+ A + A +  DE +  +++A+   GG  LV+ DHGNAE M   +  G P         LT+HT  PVP+ I G  +         L  G L +VA T ++L G   P +
Sbjct:  323 HGLRQLRLAETEKYAHVTFFFNGGVEQRDPG--EDRLLIPSPKVPTYDLKPEMSAREVTDAFLANI--EKYDIIIMNYANPDMVGHTGDLSAAIKAVETVDECLGRVVEAVLARGGTVLVSGDHGNAEHMC--DAEGCP---------LTAHTCNPVPLLIIGEAVAG-----RSLRPGSLQDVAPTILDLLGLPKPPE 501          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_CLOPE (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Clostridium perfringens GN=gpmI PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.710e-21
Identity = 66/199 (33.17%), Postives = 104/199 (52.26%), Query Frame = 2
Query:    5 GVRTFACSETVKFGHVTFFWNGNRSGYFDSNL-EEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            G+     +ET K+ HVTFF+NG   G    N  E+   I S    T++++P+M A E+ +     +   ++  + +N  N DMVGHTG  EA V A +A DE +  + D + +  G   +TADHGNAE M+  + +G+P         +T+HT  PVP       +  D + ++    G LA++A T + + G E PS+
Sbjct:  322 GLNQLRIAETEKYAHVTFFFNG---GVEQPNTNEDRALIASPKVATYDLKPEMSAYEVTDELINRLDQDKYDMIILNFANPDMVGHTGVQEAAVKAIEAVDECLGKVADKVLEKEGTLFITADHGNAEVMIDYS-TGKP---------MTAHTSDPVPFL----WVSKDAEGKSLKDGGKLADIAPTMLTVMGLEVPSE 503          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_CLOP1 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=gpmI PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.710e-21
Identity = 66/199 (33.17%), Postives = 104/199 (52.26%), Query Frame = 2
Query:    5 GVRTFACSETVKFGHVTFFWNGNRSGYFDSNL-EEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            G+     +ET K+ HVTFF+NG   G    N  E+   I S    T++++P+M A E+ +     +   ++  + +N  N DMVGHTG  EA V A +A DE +  + D + +  G   +TADHGNAE M+  + +G+P         +T+HT  PVP       +  D + ++    G LA++A T + + G E PS+
Sbjct:  322 GLNQLRIAETEKYAHVTFFFNG---GVEQPNTNEDRALIASPKVATYDLKPEMSAYEVTDELINRLDQDKYDMIILNFANPDMVGHTGVQEAAVKAIEAVDECLGKVADKVLEKEGTLFITADHGNAEVMIDYS-TGKP---------MTAHTSDPVPFL----WVSKDAEGKSLKDGGKLADIAPTMLTVMGLEVPSE 503          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_CELJU (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Cellvibrio japonicus (strain Ueda107) GN=gpmI PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.710e-21
Identity = 66/192 (34.38%), Postives = 103/192 (53.65%), Query Frame = 2
Query:   26 SETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGG-LANVAATFINLHGYEAPSD 598
            +ET K+ HVTFF+NG     +    E+ + +PS    T+++QP+M A E+ ++  +AI S ++  +  N  N DMVGH+G  +A V A +A D A+  ++ A++KV G  L+TADHGN E+M    ++G+P          T H+  PVP              +  L +GG LA+VA T + L     P +
Sbjct:  333 AETEKYAHVTFFFNGGNEVVYPG--EDRILVPSPKVATYDLQPEMSAPEVTDKLVEAIESGKYDAIICNYANCDMVGHSGLFDAAVKAVEAVDVALGRVLAAVKKVDGEALITADHGNVEEMFD-EETGQP---------HTQHSTLPVPFIFVS-------SRKGKLASGGSLADVAPTILALMDLPQPKE 505          
The following BLAST results are available for this feature:
BLAST of DC900149 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 274
Match NameE-valueIdentityDescription
GPMI_RHOS11.309e-2134.002,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_CHRVO1.309e-2133.172,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_BACME1.309e-2134.032,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_ACIAD1.309e-2135.572,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PROM31.710e-2134.012,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PORPU1.710e-2131.862,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_DESAP1.710e-2134.172,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_CLOPE1.710e-2133.172,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_CLOP11.710e-2133.172,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_CELJU1.710e-2134.382,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionDC900149 VSS Citrus sinensis cDNA clone VS27V69 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900149 ID=DC900149; Name=DC900149; organism=Citrus sinensis; type=EST; length=793bp
TAATGGTGTCCGGACTTTTGCTTGCAGTGAGACTGTCAAGTTTGGACATG
TCACTTTCTTCTGGAATGGAAACCGCTCTGGGTATTTCGACTCGAATTTG
GAGGAATATGTGGAAATTCCTAGTGATTCTGGAATTACTTTCAATGTACA
GCCCAAGATGAAGGCTTTGGAGATTGCTGAAAGGGCAAAGAAGGCCATCC
TTAGTCGCAGGTTCCACCAGGTGCGTGTTAACCTACCAAATAGTGACATG
GTGGGGCACACGGGAGATATTGAGGCAACAGTGGTGGCATGCAAGGCTGC
TGATGAAGCTGTCAAGATAATCATTGATGCAATAGAGAAAGTTGGTGGAA
TATATCTTGTTACTGCAGATCATGGCAATGCTGAGGACATGGTCAAGAGG
AACAAATCTGGGGAGCCTCTTCTTAAGGATGGCAATATTCAAGTGCTCAC
GTCTCACACTCTTAAACCCGTTCCCATTGCAATCGGAGGTCCTGGACTGC
CAGATGATGTCAAGTTCCGCACAGATCTCCCTAATGGTGGGCTGGCCAAT
GTAGCAGCAACTTTTATCAATCTCCATGGATATGAGGCGCCTAGTGACTA
CGAGCCAAGTCTTATTGAAGTAACTGACGACTGAGAAGTAACTGACGACT
GGGCGAACAATGGATCGTCGCCTAGATTTTATAACTCCGGAGGAATTCCG
TTAAAACGTAAAACAATAAATTGAATTTTGGGGTCTTGAATTCATTTTGA
TACGCGTGCTGTTTTTCAGCTTACATTTCGATTGCTGTCTGTT
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