DC900149

Overview
NameDC900149
Unique NameDC900149
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length793
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_STAAW (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Staphylococcus aureus (strain MW2) GN=gpmI PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.212e-20
Identity = 57/199 (28.64%), Postives = 101/199 (50.75%), Query Frame = 2
Query:    2 NGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            N +     +ET K+ HVT+F +G R+  F       ++ P  +  T++++P+M A E+ +   + +       + +N  N DMVGH+G +E T+ A +A DE +  ++D I  + G  ++TADHGN++ ++  +            Q +T+HT  PVP+ +   G+       T    G L ++A T ++L   E P D
Sbjct:  318 NNLTQLRIAETEKYPHVTYFMSGGRNEEFKGERRRLIDSPKVA--TYDLKPEMSAYEVKDALLEELNKGDLDLIILNFANPDMVGHSGMLEPTIKAIEAVDECLGEVVDKILDMDGYAIITADHGNSDQVLTDDD-----------QPMTTHTTNPVPVIVTKEGV-------TLRETGRLGDLAPTLLDLLNVEQPED 496          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_STAAS (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Staphylococcus aureus (strain MSSA476) GN=gpmI PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.212e-20
Identity = 57/199 (28.64%), Postives = 101/199 (50.75%), Query Frame = 2
Query:    2 NGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            N +     +ET K+ HVT+F +G R+  F       ++ P  +  T++++P+M A E+ +   + +       + +N  N DMVGH+G +E T+ A +A DE +  ++D I  + G  ++TADHGN++ ++  +            Q +T+HT  PVP+ +   G+       T    G L ++A T ++L   E P D
Sbjct:  318 NNLTQLRIAETEKYPHVTYFMSGGRNEEFKGERRRLIDSPKVA--TYDLKPEMSAYEVKDALLEELNKGDLDLIILNFANPDMVGHSGMLEPTIKAIEAVDECLGEVVDKILDMDGYAIITADHGNSDQVLTDDD-----------QPMTTHTTNPVPVIVTKEGV-------TLRETGRLGDLAPTLLDLLNVEQPED 496          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_STAAR (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Staphylococcus aureus (strain MRSA252) GN=gpmI PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.212e-20
Identity = 57/199 (28.64%), Postives = 101/199 (50.75%), Query Frame = 2
Query:    2 NGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            N +     +ET K+ HVT+F +G R+  F       ++ P  +  T++++P+M A E+ +   + +       + +N  N DMVGH+G +E T+ A +A DE +  ++D I  + G  ++TADHGN++ ++  +            Q +T+HT  PVP+ +   G+       T    G L ++A T ++L   E P D
Sbjct:  318 NNLTQLRIAETEKYPHVTYFMSGGRNEEFKGERRRLIDSPKVA--TYDLKPEMSAYEVKDALLEELNKGDLDLIILNFANPDMVGHSGMLEPTIKAIEAVDECLGEVVDKILDMDGYAIITADHGNSDQVLTDDD-----------QPMTTHTTNPVPVIVTKEGV-------TLRETGRLGDLAPTLLDLLNVEQPED 496          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_STAAN (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Staphylococcus aureus (strain N315) GN=gpmI PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.212e-20
Identity = 57/199 (28.64%), Postives = 101/199 (50.75%), Query Frame = 2
Query:    2 NGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            N +     +ET K+ HVT+F +G R+  F       ++ P  +  T++++P+M A E+ +   + +       + +N  N DMVGH+G +E T+ A +A DE +  ++D I  + G  ++TADHGN++ ++  +            Q +T+HT  PVP+ +   G+       T    G L ++A T ++L   E P D
Sbjct:  318 NNLTQLRIAETEKYPHVTYFMSGGRNEEFKGERRRLIDSPKVA--TYDLKPEMSAYEVKDALLEELNKGDLDLIILNFANPDMVGHSGMLEPTIKAIEAVDECLGEVVDKILDMDGYAIITADHGNSDQVLTDDD-----------QPMTTHTTNPVPVIVTKEGV-------TLRETGRLGDLAPTLLDLLNVEQPED 496          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_STAAM (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=gpmI PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.212e-20
Identity = 57/199 (28.64%), Postives = 101/199 (50.75%), Query Frame = 2
Query:    2 NGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            N +     +ET K+ HVT+F +G R+  F       ++ P  +  T++++P+M A E+ +   + +       + +N  N DMVGH+G +E T+ A +A DE +  ++D I  + G  ++TADHGN++ ++  +            Q +T+HT  PVP+ +   G+       T    G L ++A T ++L   E P D
Sbjct:  318 NNLTQLRIAETEKYPHVTYFMSGGRNEEFKGERRRLIDSPKVA--TYDLKPEMSAYEVKDALLEELNKGDLDLIILNFANPDMVGHSGMLEPTIKAIEAVDECLGEVVDKILDMDGYAIITADHGNSDQVLTDDD-----------QPMTTHTTNPVPVIVTKEGV-------TLRETGRLGDLAPTLLDLLNVEQPED 496          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_STAAC (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Staphylococcus aureus (strain COL) GN=gpmI PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.212e-20
Identity = 57/199 (28.64%), Postives = 101/199 (50.75%), Query Frame = 2
Query:    2 NGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            N +     +ET K+ HVT+F +G R+  F       ++ P  +  T++++P+M A E+ +   + +       + +N  N DMVGH+G +E T+ A +A DE +  ++D I  + G  ++TADHGN++ ++  +            Q +T+HT  PVP+ +   G+       T    G L ++A T ++L   E P D
Sbjct:  318 NNLTQLRIAETEKYPHVTYFMSGGRNEEFKGERRRLIDSPKVA--TYDLKPEMSAYEVKDALLEELNKGDLDLIILNFANPDMVGHSGMLEPTIKAIEAVDECLGEVVDKILDMDGYAIITADHGNSDQVLTDDD-----------QPMTTHTTNPVPVIVTKEGV-------TLRETGRLGDLAPTLLDLLNVEQPED 496          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_PROMA (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Prochlorococcus marinus GN=gpmI PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.212e-20
Identity = 67/205 (32.68%), Postives = 102/205 (49.76%), Query Frame = 2
Query:    2 NGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPI--------AIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAP 592
            +G+  +  +ET K+ HVT+F+NG             V  PS    T+++ P+M A ++ +  ++AI S  +  + +N  N DMVGHTG   AT  A    D+ +  I+D+  K+ G  L+TADHGNAE M  +   GEP          T+HT  PVP+         I G G  + ++ R     GGLA++A T + +     P
Sbjct:  329 HGLLQYRTAETEKYPHVTYFFNGGIEQPLPGEKRHLV--PSPRVATYDLSPEMSAEKLTKSCQEAIESGIYSLIVINYANPDMVGHTGIHAATKKAISTVDKCIGKILDSTGKMSGTLLITADHGNAELM--KGPDGEP---------WTAHTTNPVPVILIEGEKRKISGQG--NQIRLR---EGGGLADIAPTLLEVLSLPKP 515          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_PARD8 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=gpmI PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.212e-20
Identity = 64/191 (33.51%), Postives = 102/191 (53.40%), Query Frame = 2
Query:   26 SETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            +ET K+ HVTFF+NG R   FDS  EE + +PS    T++++P+M A E+ ++   AI +++F  + VN  N DMVGHTG  +A   A    D  +   ++A +      ++ ADHGNA+  +  N+ G P          T+H+L PVP          D K    + +G LA+VA + +++ G + P +
Sbjct:  328 AETEKYAHVTFFFNGGRETPFDS--EERILVPSPKVATYDLKPEMSAFEVKDKLVDAINTKKFDFIVVNYANGDMVGHTGIYKAIEKAVVTIDACLHDTVEAAKANDYEVIIIADHGNADHAL--NEDGTP---------NTAHSLNPVPFVYVTAN--KDAK----VEDGILADVAPSILHILGLKQPKE 499          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_NATPD (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=gpmI PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.212e-20
Identity = 68/189 (35.98%), Postives = 93/189 (49.21%), Query Frame = 2
Query:   26 SETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAP 592
            +E+ K+ HVT+F NG R   F+    + V+ P     T++ QP M A E+ + A   I +     + +N  N DMVGHTGD EA   A +A DE +  +  AI + GG   VTADHGNA+DM      G P          T+HT  PVP     P   D      D   G LA++A T ++  G + P
Sbjct:  323 AESEKYAHVTYFLNGGREVAFEGERRDIVDSPDVP--TYDEQPAMSAPELTDAAIDHIGADAPDVLVLNYANPDMVGHTGDFEAAKAAIEAVDEQLGRLESAIREAGGHLFVTADHGNADDM------GTPEAPH------TAHTTNPVPFVYCTPDGTDGGYTVRD--GGTLADIAPTLLSTIGVDIP 495          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_HALWD (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Haloquadratum walsbyi (strain DSM 16790) GN=gpmI PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 7.185e-20
Identity = 64/197 (32.49%), Postives = 97/197 (49.24%), Query Frame = 2
Query:    5 GVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPS 595
            G+     +E+ K+ HVT+F NG R   F+    E ++ P  S  T++ QP M + E+ + A + I +     + +N  N DMVGHTGD  A + A ++ D  +  +++ I   GG  +VTADHGNA++M     +  P          T+HT  PVPI    P    D     D   G L ++A T + L   E P+
Sbjct:  315 GLTQLRIAESEKYAHVTYFLNGGREIAFEDERREIIKSPDVS--TYDQQPSMSSNEVTDTAIEQINTTDPDVLILNYANPDMVGHTGDFTAAIEAIESVDTQLDRLLETIYAAGGHVIVTADHGNADNM---GTAANP---------HTAHTTNPVPIVYTRPDGNGDGDTIRD--GGSLCDIAPTVLELLSVEQPA 495          
The following BLAST results are available for this feature:
BLAST of DC900149 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 274
Match NameE-valueIdentityDescription
GPMI_STAAW4.212e-2028.642,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_STAAS4.212e-2028.642,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_STAAR4.212e-2028.642,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_STAAN4.212e-2028.642,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_STAAM4.212e-2028.642,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_STAAC4.212e-2028.642,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PROMA4.212e-2032.682,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PARD84.212e-2033.512,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_NATPD4.212e-2035.982,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_HALWD7.185e-2032.492,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionDC900149 VSS Citrus sinensis cDNA clone VS27V69 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900149 ID=DC900149; Name=DC900149; organism=Citrus sinensis; type=EST; length=793bp
TAATGGTGTCCGGACTTTTGCTTGCAGTGAGACTGTCAAGTTTGGACATG
TCACTTTCTTCTGGAATGGAAACCGCTCTGGGTATTTCGACTCGAATTTG
GAGGAATATGTGGAAATTCCTAGTGATTCTGGAATTACTTTCAATGTACA
GCCCAAGATGAAGGCTTTGGAGATTGCTGAAAGGGCAAAGAAGGCCATCC
TTAGTCGCAGGTTCCACCAGGTGCGTGTTAACCTACCAAATAGTGACATG
GTGGGGCACACGGGAGATATTGAGGCAACAGTGGTGGCATGCAAGGCTGC
TGATGAAGCTGTCAAGATAATCATTGATGCAATAGAGAAAGTTGGTGGAA
TATATCTTGTTACTGCAGATCATGGCAATGCTGAGGACATGGTCAAGAGG
AACAAATCTGGGGAGCCTCTTCTTAAGGATGGCAATATTCAAGTGCTCAC
GTCTCACACTCTTAAACCCGTTCCCATTGCAATCGGAGGTCCTGGACTGC
CAGATGATGTCAAGTTCCGCACAGATCTCCCTAATGGTGGGCTGGCCAAT
GTAGCAGCAACTTTTATCAATCTCCATGGATATGAGGCGCCTAGTGACTA
CGAGCCAAGTCTTATTGAAGTAACTGACGACTGAGAAGTAACTGACGACT
GGGCGAACAATGGATCGTCGCCTAGATTTTATAACTCCGGAGGAATTCCG
TTAAAACGTAAAACAATAAATTGAATTTTGGGGTCTTGAATTCATTTTGA
TACGCGTGCTGTTTTTCAGCTTACATTTCGATTGCTGTCTGTT
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