DC900149

Overview
NameDC900149
Unique NameDC900149
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length793
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_VIBPA (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Vibrio parahaemolyticus GN=gpmI PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.724e-27
Identity = 74/191 (38.74%), Postives = 110/191 (57.59%), Query Frame = 2
Query:   26 SETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            SET K+ HVTFF+NG     F+    + V  P  +  T+++QP+M + E+ E+   AI S ++  +  N PN+DMVGHTG  EA   A +A DE+V  +++AI++VGG  L+TADHGNAE M+     G          V T+HT  PVP+   G      V+F+     G L+++A T ++L G E P++
Sbjct:  330 SETEKYAHVTFFFNGGVENEFEGEERQLVASPKVA--TYDLQPEMSSPELTEKLVAAIKSGKYDTIICNYPNADMVGHTGVYEAAEKAIEALDESVGKVVEAIKEVGGQLLITADHGNAEMMIDPETGG----------VHTAHTNLPVPLIYVG---DKAVEFK---EGGKLSDLAPTMLSLAGLEIPAE 502          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_GLUOX (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Gluconobacter oxydans GN=gpmI PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.724e-27
Identity = 74/189 (39.15%), Postives = 107/189 (56.61%), Query Frame = 2
Query:   26 SETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAP 592
            +ET K+ HVT+F NG R   FD   EE + +PS    T+++QP+M A E+ ++A  AI S +F  + +N  N DMVGHTG + A + AC+  D+ +  I DAI K GG+ LVTADHGN E M       +P+    +    TSHTL  VP+ +         +  T + +G LA++A T + L G + P
Sbjct:  329 AETEKYPHVTYFLNGGREVQFDG--EERILVPSPKVATYDLQPEMSAPELTDKAVAAIESGKFDMIVLNFANPDMVGHTGSLSAAIKACETVDQGLGRINDAIVKAGGVLLVTADHGNCETM------RDPVTGGAH----TSHTLNVVPVILA------HARGET-IHDGRLADLAPTMLALMGVKQP 498          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_SHEB9 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Shewanella baltica (strain OS195) GN=gpmI PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.558e-27
Identity = 70/191 (36.65%), Postives = 103/191 (53.93%), Query Frame = 2
Query:   26 SETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            SET K+ HVTFF+NG +   F+   E+ + I S    T+++QP+M + E+ ++   AI S ++  +  N PN DMVGHTG+ +A V AC+A D  +  ++DA+ KVGG  ++TADHGNAE M                Q  T+HT + VP    G     D         G L++VA T + L G   P++
Sbjct:  332 SETEKYAHVTFFFNGGKEEPFEG--EDRILINSPKVATYDLQPEMSSAELTDKLVAAIESTKYDVIICNYPNGDMVGHTGNFDAAVKACEAVDACIGCVVDALAKVGGECIITADHGNAEQMTDETTG----------QAHTAHTSELVPFVFVGRDATID-------EGGKLSDVAPTILTLIGEAIPAE 503          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_PSEF5 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=gpmI PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.558e-27
Identity = 78/199 (39.20%), Postives = 106/199 (53.27%), Query Frame = 2
Query:    2 NGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            NG      +ET K+ HVTFF++G R   F    EE + IPS    T+++QP+M A E+ ++   AI  +R+  + VN  N DMVGH+G  EA V A +  D  V  I+DA+EKVGG  L+TADHGN E M   +            Q  T+HT +PVP    G      +K R     G LA+VA T + L G   P++
Sbjct:  321 NGKTQLRIAETEKYAHVTFFFSGGREEPFPG--EERILIPSPKVATYDLQPEMSAPEVTDKIVDAIEHQRYDVIIVNYANGDMVGHSGVFEAAVKAVECLDLCVGRIVDALEKVGGEALITADHGNVEQMSDESTG----------QAHTAHTTEPVPFIYVGKRA---LKVR---EGGVLADVAPTMLKLLGLPKPAE 501          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_CLOTH (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=gpmI PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.558e-27
Identity = 68/198 (34.34%), Postives = 109/198 (55.05%), Query Frame = 2
Query:    5 GVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            G+R    +ET K+ HVTFF+NG     ++   E+ + I S    T++++P+M A E+ ++  + I  + +  + +N  N DMVGHTG  EA   A +A DE +  ++ A+ +  G+ L+TADHGN+E M+     G            T+HT  PVP+ + G G   DVK R     G LA++A T +++ G+E P +
Sbjct:  324 GLRQLRIAETEKYAHVTFFFNGGVEAVYEG--EDRILINSPKVATYDLKPEMSAYEVTDKVLECINKKEYDVIILNYANPDMVGHTGVFEAAKAAIEAIDECLGKVVPAVLEQNGVVLITADHGNSEQMIDYETGGP----------FTAHTTNPVPLIVIGLG---DVKLR----EGRLADLAPTMLDILGFEKPKE 502          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_THEEB (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Thermosynechococcus elongatus (strain BP-1) GN=gpmI PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.647e-27
Identity = 77/197 (39.09%), Postives = 108/197 (54.82%), Query Frame = 2
Query:    2 NGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVP-IAIGG-----PGLPDDVKFRTDLPNGGLANVAATFINL 574
            +G++    +ET K+ HVT+F+NG     F    E+ + IPS    T++  P M AL + +  KKAI  + +  V VN  NSDMVGHTG + AT+ A +  D  V ++++A  KVGG  L+TADHGNAE M+          +DGN    T+HT  PVP I + G     PG    V  R D   G LA++A T + +
Sbjct:  318 HGLKQLRAAETEKYAHVTYFFNGGLEEPFPG--EDRILIPSPMVTTYDQAPAMSALAVTQAVKKAIEKQEYALVVVNFANSDMVGHTGKLAATIQAIETVDRCVGVLVEAATKVGGTLLITADHGNAEYMID---------EDGN--PWTAHTTNPVPFILVEGEKRKVPGHGGHVILRKD---GCLADIAPTILEI 498          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_SHESR (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Shewanella sp. (strain MR-7) GN=gpmI PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.647e-27
Identity = 71/191 (37.17%), Postives = 104/191 (54.45%), Query Frame = 2
Query:   26 SETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            SET K+ HVTFF+NG +   F  N E+ + I S    T+++QP+M + E+ ++   AI S ++  +  N PN DMVGHTG+ +A V AC+A D  +  ++DA+ KVGG  ++TADHGNAE M                Q  T+HT + VP    G     D         G L++VA T ++L G   P++
Sbjct:  332 SETEKYAHVTFFFNGGKEEPF--NGEDRILINSPKVATYDLQPEMSSTELTDKLVAAIESAQYDVIICNYPNGDMVGHTGNFDAAVKACEAVDACIGRVVDALAKVGGECIITADHGNAEQMTDETTG----------QAHTAHTSELVPFVFVGRDATID-------EGGKLSDVAPTILHLMGETIPAE 503          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_SHESM (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Shewanella sp. (strain MR-4) GN=gpmI PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.647e-27
Identity = 71/191 (37.17%), Postives = 104/191 (54.45%), Query Frame = 2
Query:   26 SETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            SET K+ HVTFF+NG +   F  N E+ + I S    T+++QP+M + E+ ++   AI S ++  +  N PN DMVGHTG+ +A V AC+A D  +  ++DA+ KVGG  ++TADHGNAE M                Q  T+HT + VP    G     D         G L++VA T ++L G   P++
Sbjct:  332 SETEKYAHVTFFFNGGKEEPF--NGEDRILINSPKVATYDLQPEMSSTELTDKLVAAIESAQYDVIICNYPNGDMVGHTGNFDAAVKACEAVDACIGRVVDALAKVGGECIITADHGNAEQMTDETTG----------QAHTAHTSELVPFVFVGRDATID-------EGGKLSDVAPTILHLMGETIPAE 503          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_SHESH (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Shewanella sediminis (strain HAW-EB3) GN=gpmI PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.647e-27
Identity = 72/192 (37.50%), Postives = 107/192 (55.73%), Query Frame = 2
Query:   26 SETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVP-IAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            SET K+ HVTFF+NG +   F    E+ + I S    T+++QP+M + E+ ++  +AI S ++  +  N PN DMVGHTG  +A V AC+A D  +  ++DA+ KV G  L+TADHGNAE M                Q  T+HT + VP I +G  G  ++        +G L+++A T + L G E PS+
Sbjct:  332 SETEKYAHVTFFFNGGKEEPFKG--EDRILIQSPKVATYDLQPEMSSAELTDKLVEAIESTKYDVIICNYPNGDMVGHTGSFDAAVKACEAVDTCIGRVVDALAKVDGECLITADHGNAEQMTDEQTG----------QAHTAHTSELVPLIYVGRNGSIEN--------DGRLSDLAPTMLTLMGEEVPSE 503          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_SHESA (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Shewanella sp. (strain ANA-3) GN=gpmI PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.647e-27
Identity = 71/191 (37.17%), Postives = 104/191 (54.45%), Query Frame = 2
Query:   26 SETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            SET K+ HVTFF+NG +   F  N E+ + I S    T+++QP+M + E+ ++   AI S ++  +  N PN DMVGHTG+ +A V AC+A D  +  ++DA+ KVGG  ++TADHGNAE M                Q  T+HT + VP    G     D         G L++VA T ++L G   P++
Sbjct:  332 SETEKYAHVTFFFNGGKEEPF--NGEDRILINSPKVATYDLQPEMSSTELTDKLVAAIESAQYDVIICNYPNGDMVGHTGNFDAAVKACEAVDACIGRVVDALAKVGGECIITADHGNAEQMTDETTG----------QAHTAHTSELVPFVFVGRDATID-------EGGKLSDVAPTILHLMGETIPAE 503          
The following BLAST results are available for this feature:
BLAST of DC900149 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 274
Match NameE-valueIdentityDescription
GPMI_VIBPA2.724e-2738.742,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_GLUOX2.724e-2739.152,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SHEB93.558e-2736.652,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PSEF53.558e-2739.202,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_CLOTH3.558e-2734.342,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_THEEB4.647e-2739.092,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SHESR4.647e-2737.172,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SHESM4.647e-2737.172,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SHESH4.647e-2737.502,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SHESA4.647e-2737.172,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionDC900149 VSS Citrus sinensis cDNA clone VS27V69 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900149 ID=DC900149; Name=DC900149; organism=Citrus sinensis; type=EST; length=793bp
TAATGGTGTCCGGACTTTTGCTTGCAGTGAGACTGTCAAGTTTGGACATG
TCACTTTCTTCTGGAATGGAAACCGCTCTGGGTATTTCGACTCGAATTTG
GAGGAATATGTGGAAATTCCTAGTGATTCTGGAATTACTTTCAATGTACA
GCCCAAGATGAAGGCTTTGGAGATTGCTGAAAGGGCAAAGAAGGCCATCC
TTAGTCGCAGGTTCCACCAGGTGCGTGTTAACCTACCAAATAGTGACATG
GTGGGGCACACGGGAGATATTGAGGCAACAGTGGTGGCATGCAAGGCTGC
TGATGAAGCTGTCAAGATAATCATTGATGCAATAGAGAAAGTTGGTGGAA
TATATCTTGTTACTGCAGATCATGGCAATGCTGAGGACATGGTCAAGAGG
AACAAATCTGGGGAGCCTCTTCTTAAGGATGGCAATATTCAAGTGCTCAC
GTCTCACACTCTTAAACCCGTTCCCATTGCAATCGGAGGTCCTGGACTGC
CAGATGATGTCAAGTTCCGCACAGATCTCCCTAATGGTGGGCTGGCCAAT
GTAGCAGCAACTTTTATCAATCTCCATGGATATGAGGCGCCTAGTGACTA
CGAGCCAAGTCTTATTGAAGTAACTGACGACTGAGAAGTAACTGACGACT
GGGCGAACAATGGATCGTCGCCTAGATTTTATAACTCCGGAGGAATTCCG
TTAAAACGTAAAACAATAAATTGAATTTTGGGGTCTTGAATTCATTTTGA
TACGCGTGCTGTTTTTCAGCTTACATTTCGATTGCTGTCTGTT
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