DC900149

Overview
NameDC900149
Unique NameDC900149
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length793
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_SHEB8 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Shewanella baltica (strain OS185) GN=gpmI PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.647e-27
Identity = 70/191 (36.65%), Postives = 103/191 (53.93%), Query Frame = 2
Query:   26 SETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            SET K+ HVTFF+NG +   F+   E+ + I S    T+++QP+M + E+ ++   AI S ++  +  N PN DMVGHTG+ +A V AC+A D  +  ++DA+ KVGG  ++TADHGNAE M                Q  T+HT + VP    G     D         G L++VA T + L G   P++
Sbjct:  332 SETEKYAHVTFFFNGGKEEPFEG--EDRILINSPKVATYDLQPEMSSAELTDKLVAAIESTKYDVIICNYPNGDMVGHTGNFDAAVKACEAVDACIGRVVDALAKVGGECIITADHGNAEQMTDETTG----------QAHTAHTSELVPFVFVGRNATID-------EGGKLSDVAPTILTLIGEAIPAE 503          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_SHEB5 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=gpmI PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.647e-27
Identity = 70/191 (36.65%), Postives = 103/191 (53.93%), Query Frame = 2
Query:   26 SETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            SET K+ HVTFF+NG +   F+   E+ + I S    T+++QP+M + E+ ++   AI S ++  +  N PN DMVGHTG+ +A V AC+A D  +  ++DA+ KVGG  ++TADHGNAE M                Q  T+HT + VP    G     D         G L++VA T + L G   P++
Sbjct:  332 SETEKYAHVTFFFNGGKEEPFEG--EDRILINSPKVATYDLQPEMSSAELTDKLVAAIESTKYDVIICNYPNGDMVGHTGNFDAAVKACEAVDACIGRVVDALAKVGGECIITADHGNAEQMTDETTG----------QAHTAHTSELVPFVFVGRNATID-------EGGKLSDVAPTILTLIGEAIPAE 503          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_PSE14 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=gpmI PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.647e-27
Identity = 78/199 (39.20%), Postives = 106/199 (53.27%), Query Frame = 2
Query:    2 NGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            NG      +ET K+ HVTFF++G R   F    EE + IPS    T+++QP+M A E+ ++   AI  +R+  + VN  N DMVGH+G +EA + A +  D  V  I  A+EKVGG  L+TADHGN E M            D   Q  T+HT +PVP    G      +K R     G LA+VA T ++L G E P +
Sbjct:  320 NGKTQLRIAETEKYAHVTFFFSGGREEPFPG--EERILIPSPKVATYDLQPEMSAPEVTDKIVDAIEHQRYDVIIVNYANGDMVGHSGIMEAAIKAVECLDVCVGRITAALEKVGGEALITADHGNVEQMT----------DDSTGQAHTAHTSEPVPFVYVG---KRPLKVR---EGGVLADVAPTMLHLLGMEKPQE 500          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_CHLSY (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=gpmI PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.647e-27
Identity = 80/200 (40.00%), Postives = 106/200 (53.00%), Query Frame = 2
Query:    5 GVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVP-IAIGGPGLPDDVKFRTDLPNGG-LANVAATFINLHGYEAPSD 598
            G+R F  +ET K+ HVTFF NG R   F    E+   IPS    T++++P+M A E+ E    AI S ++  + VN  N DMVGHTG I A + AC+A D  +  ++ AI + GG+ LV ADHGNAE M+     G            T+HT  P P   IGG G   D     +L +GG LA+VA T + L   E   D
Sbjct:  345 GLRQFHIAETEKYPHVTFFLNGGREEPFPG--EDRQLIPSPKVATYDLKPEMSAPEVTEALLAAIDSDQYDFIVVNYANPDMVGHTGSIPAVIKACEAVDAGLARVVPAILERGGVALVIADHGNAEQMIDPETGGPH----------TAHTTNPAPCFLIGGAGYGKDA---IELRHGGRLADVAPTLLELLELEPSPD 529          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_CHLAA (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=gpmI PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.647e-27
Identity = 80/200 (40.00%), Postives = 106/200 (53.00%), Query Frame = 2
Query:    5 GVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVP-IAIGGPGLPDDVKFRTDLPNGG-LANVAATFINLHGYEAPSD 598
            G+R F  +ET K+ HVTFF NG R   F    E+   IPS    T++++P+M A E+ E    AI S ++  + VN  N DMVGHTG I A + AC+A D  +  ++ AI + GG+ LV ADHGNAE M+     G            T+HT  P P   IGG G   D     +L +GG LA+VA T + L   E   D
Sbjct:  345 GLRQFHIAETEKYPHVTFFLNGGREEPFPG--EDRQLIPSPKVATYDLKPEMSAPEVTEALLAAIDSDQYDFIVVNYANPDMVGHTGSIPAVIKACEAVDAGLARVVPAILERGGVALVIADHGNAEQMIDPETGGPH----------TAHTTNPAPCFLIGGAGYGKDA---IELRHGGRLADVAPTLLELLELEPSPD 529          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_SYMTH (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Symbiobacterium thermophilum GN=gpmI PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 6.069e-27
Identity = 75/196 (38.27%), Postives = 105/196 (53.57%), Query Frame = 2
Query:    5 GVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAP 592
            G+R    +ET K+ HVT+F+NG     F    EE V +PS    T++++P+M A E+A  A K I   R   + +N  N DMVGHTG +EA + A +A DE +  ++DA+   GG  ++ ADHGN + MV   ++G P          T+HTL PVP       L DD +    L  G LANVA T + + G   P
Sbjct:  323 GLRQLRIAETEKYAHVTYFFNGGEERVFPG--EERVLVPSPKVATYDLKPEMSAYEVAREAVKWIEEDRTDFIVLNFANPDMVGHTGVLEAAIRAVEAVDECLGQVVDALLAKGGAAVIIADHGNCDQMVD-YETGAP---------HTNHTLNPVPCI-----LVDDQRLDAKLKPGVLANVAPTLLEIIGLPKP 501          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_SHEON (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Shewanella oneidensis GN=gpmI PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 7.926e-27
Identity = 70/191 (36.65%), Postives = 104/191 (54.45%), Query Frame = 2
Query:   26 SETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            SET K+ HVTFF+NG +   F  N E+ + I S    T+++QP+M + E+ ++   AI S ++  +  N PN DMVGHTG+ +A V AC+A D  +  +++A+ KVGG  ++TADHGNAE M                Q  T+HT + VP    G     D         G L++VA T ++L G   P++
Sbjct:  332 SETEKYAHVTFFFNGGKEEPF--NGEDRILINSPKVATYDLQPEMSSTELTDKLVAAIESTKYDVIICNYPNGDMVGHTGNFDAAVKACEAVDACIGRVVEALAKVGGECIITADHGNAEQMTDETTG----------QAHTAHTSELVPFVFVGRDATID-------KGGKLSDVAPTILHLMGESIPAE 503          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_PSYIN (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Psychromonas ingrahamii (strain 37) GN=gpmI PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 7.926e-27
Identity = 73/200 (36.50%), Postives = 107/200 (53.50%), Query Frame = 2
Query:    2 NGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGG-LANVAATFINLHGYEAPSD 598
            +G      SET K+ HVTFF+NG     F    E+   I S S  T+++QP+M ++E+ E+   AI S ++  +  N PN DMVGHTG  +A V AC+A D  V  ++ A+++V G  L+TADHGNAE M+     G          + T+HT  PVP    G           ++ +GG L ++A T +NL   E P++
Sbjct:  320 HGKTQLRISETEKYAHVTFFFNGGVESEFKG--EDRTLIKSPSVATYDMQPEMSSIELTEKLVSAIKSTKYDVIICNYPNGDMVGHTGVYDAAVKACEAVDSCVGKVVAALKEVDGECLITADHGNAEQMIDPVTGG----------IHTAHTNLPVPFIYVGR--------NAEMASGGRLCDIAPTMLNLMDMEIPAE 499          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_SHEDO (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=gpmI PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.035e-26
Identity = 70/191 (36.65%), Postives = 105/191 (54.97%), Query Frame = 2
Query:   26 SETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            SET K+ HVTFF+NG +   F    E+ + IPS    T+++QP+M + E+ ++  +AI S ++  V  N PN DMVGHTG+ +A V AC+A D  +  ++ A+ KV G  L+TADHGNAE M   +            Q  T+HT + VP    G     D   +     G L+++A T ++L G   P++
Sbjct:  332 SETEKYAHVTFFFNGGKEDPFKG--EDRIMIPSPKVATYDLQPEMNSTELTDKLVEAIESAKYDVVICNYPNGDMVGHTGNFDAAVKACEAVDACIGRVVAALAKVNGECLITADHGNAEQMTDESTG----------QAHTAHTSELVPFIYVG----RDASIK---DGGRLSDIAPTMLSLMGQPVPAE 503          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_PSEMY (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Pseudomonas mendocina (strain ymp) GN=gpmI PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.035e-26
Identity = 77/200 (38.50%), Postives = 106/200 (53.00%), Query Frame = 2
Query:    2 NGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGG-LANVAATFINLHGYEAPSD 598
            NG      +ET K+ HVTFF++G R   F+   EE + IPS    T++++P+M A E+ +R   AI ++R+  + VN  N DMVGHTG  EA V A +  D  V  I +A++KVGG  L+TADHGN E M                Q  T+HT +PVP    G       K    +  GG LA+VA T + L G   P++
Sbjct:  320 NGKTQLRIAETEKYAHVTFFFSGGREEPFEG--EERILIPSPDVATYDLKPEMSAPEVTDRIVDAIENQRYDVIIVNYANGDMVGHTGVFEAAVKAVETLDTCVGRITEALQKVGGEALITADHGNVEQMEDECTG----------QAHTAHTCEPVPFIYVG-------KRPARIREGGVLADVAPTLLTLMGLPQPAE 500          
The following BLAST results are available for this feature:
BLAST of DC900149 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 274
Match NameE-valueIdentityDescription
GPMI_SHEB84.647e-2736.652,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SHEB54.647e-2736.652,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PSE144.647e-2739.202,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_CHLSY4.647e-2740.002,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_CHLAA4.647e-2740.002,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SYMTH6.069e-2738.272,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SHEON7.926e-2736.652,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PSYIN7.926e-2736.502,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SHEDO1.035e-2636.652,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PSEMY1.035e-2638.502,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionDC900149 VSS Citrus sinensis cDNA clone VS27V69 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900149 ID=DC900149; Name=DC900149; organism=Citrus sinensis; type=EST; length=793bp
TAATGGTGTCCGGACTTTTGCTTGCAGTGAGACTGTCAAGTTTGGACATG
TCACTTTCTTCTGGAATGGAAACCGCTCTGGGTATTTCGACTCGAATTTG
GAGGAATATGTGGAAATTCCTAGTGATTCTGGAATTACTTTCAATGTACA
GCCCAAGATGAAGGCTTTGGAGATTGCTGAAAGGGCAAAGAAGGCCATCC
TTAGTCGCAGGTTCCACCAGGTGCGTGTTAACCTACCAAATAGTGACATG
GTGGGGCACACGGGAGATATTGAGGCAACAGTGGTGGCATGCAAGGCTGC
TGATGAAGCTGTCAAGATAATCATTGATGCAATAGAGAAAGTTGGTGGAA
TATATCTTGTTACTGCAGATCATGGCAATGCTGAGGACATGGTCAAGAGG
AACAAATCTGGGGAGCCTCTTCTTAAGGATGGCAATATTCAAGTGCTCAC
GTCTCACACTCTTAAACCCGTTCCCATTGCAATCGGAGGTCCTGGACTGC
CAGATGATGTCAAGTTCCGCACAGATCTCCCTAATGGTGGGCTGGCCAAT
GTAGCAGCAACTTTTATCAATCTCCATGGATATGAGGCGCCTAGTGACTA
CGAGCCAAGTCTTATTGAAGTAACTGACGACTGAGAAGTAACTGACGACT
GGGCGAACAATGGATCGTCGCCTAGATTTTATAACTCCGGAGGAATTCCG
TTAAAACGTAAAACAATAAATTGAATTTTGGGGTCTTGAATTCATTTTGA
TACGCGTGCTGTTTTTCAGCTTACATTTCGATTGCTGTCTGTT
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