DC900149

Overview
NameDC900149
Unique NameDC900149
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length793
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_SALPA (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Salmonella paratyphi A GN=gpmI PE=3 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 8.763e-26
Identity = 73/191 (38.22%), Postives = 105/191 (54.97%), Query Frame = 2
Query:   26 SETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            SET K+ HVTFF+NG     F    EE + I S    T+++QP+M + E+ E+   AI S ++  +  N PN DMVGHTG +EA + A +A D  ++ +  A+E VGG  L+TADHGNAE M +   +G         Q  T+HT  PVP+   G       K    +  G L+++A T ++L G E P +
Sbjct:  332 SETEKYAHVTFFFNGGVEEPFAG--EERILINSPKVATYDLQPEMSSAELTEKLVAAIESGKYDTIICNYPNGDMVGHTGVMEAAIKAVEALDNCIEQVTKAVESVGGQLLITADHGNAEQM-RDPATG---------QAHTAHTNLPVPLIYVGE------KNVKAVEGGKLSDIAPTMLSLMGMEIPQE 504          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_METMA (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Methanosarcina mazei GN=gpmI PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 8.763e-26
Identity = 73/190 (38.42%), Postives = 105/190 (55.26%), Query Frame = 2
Query:    5 GVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINL 574
            G+     +ET K+ HVTFF NG +   +    E+   IPS    T++++P+M A E+ +   K ILS ++  + +N  N DMVGHTGD EA V A +  D  V  I++A+   GG  L+TADHGNAE M + + +GEP          T+HT  PV     G G   +VK    L NG L+++A T ++L
Sbjct:  332 GLIQLRIAETEKYAHVTFFLNGGQEKCYSG--EDRCLIPSPKISTYDLKPEMSAYEVTDEVVKRILSGKYDVIILNFANMDMVGHTGDFEAAVKAVETVDNCVGRIVEALRTAGGAALITADHGNAEQM-ENSHTGEP---------HTAHTSNPVKCIYTGNG---EVK---ALENGKLSDLAPTLLDL 503          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_ENT38 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Enterobacter sp. (strain 638) GN=gpmI PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 8.763e-26
Identity = 74/191 (38.74%), Postives = 103/191 (53.93%), Query Frame = 2
Query:   26 SETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            SET K+ HVTFF+NG     F    E+ + I S    T+++QP+M + E+ E+   AI S ++  +  N PN DMVGHTG +EA V A +  D  V+ +  A+E VGG  L+TADHGNAE M  R+ S          Q  T+HT  PVP+   G       K    +  G L+++A T + L G E P +
Sbjct:  332 SETEKYAHVTFFFNGGVEEPFKG--EDRILINSPKVATYDLQPEMSSAELTEKLVAAITSGKYDTIICNYPNGDMVGHTGVMEAAVKAVETLDHCVEQVAKAVESVGGQLLITADHGNAEQM--RDPS--------TGQAHTAHTNLPVPLIYVGE------KSLKAVEGGKLSDIAPTMLTLMGMEIPKE 504          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_SHEFN (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Shewanella frigidimarina (strain NCIMB 400) GN=gpmI PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.145e-25
Identity = 70/193 (36.27%), Postives = 106/193 (54.92%), Query Frame = 2
Query:   26 SETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKD-GNIQVLTSHTLKPVP-IAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            SET K+ HVTFF+NG +   F+   E+ + I S    T+++QP+M + E+ ++   AI S ++  +  N PN DMVGH+G+ +A V AC+A D  +  +++A+ KV G  L+TADHGNAE M           KD  N Q  T+HT   VP + +G   +  D         G L+++A T + L G   P +
Sbjct:  331 SETEKYAHVTFFFNGGKEEPFEG--EDRILIQSPKVATYDLQPEMSSTELTDKLVAAIESTKYDVIICNYPNGDMVGHSGNFDAAVKACEAVDACIGRVVEALAKVDGECLITADHGNAEKM-----------KDPSNGQAFTAHTSNLVPFVYVGRDAVIKD--------GGRLSDIAPTMLTLMGQSIPKE 502          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_LEGPL (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Legionella pneumophila (strain Lens) GN=gpmI PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.145e-25
Identity = 69/199 (34.67%), Postives = 106/199 (53.27%), Query Frame = 2
Query:    2 NGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            +G+     +ET K+ HVTFF+NG     F +  EE + +PS    T+++QP+M A E+ +    AI S+ +H +  N  N+DMVGHTG+ EATV A +  D+ ++ +  A++  GG  L+TADHGNAE+M            +   Q  T+HT +PVP    G G      +      G L ++A + + L G   P +
Sbjct:  320 HGLSQLRIAETEKYAHVTFFFNGGCESVFTN--EERIMVPSPQVATYDLQPEMSAHELTKTLIAAINSQDYHVIICNYANADMVGHTGNFEATVQAIECLDQCMQQVWQALKNNGGKLLITADHGNAEEM----------FSEATNQAHTAHTSEPVPFLYVGGG------WHFTHSEGSLIDIAPSLLALLGITPPPE 500          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_LEGPH (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=gpmI PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.145e-25
Identity = 69/199 (34.67%), Postives = 106/199 (53.27%), Query Frame = 2
Query:    2 NGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            +G+     +ET K+ HVTFF+NG     F +  EE + +PS    T+++QP+M A E+ +    AI S+ +H +  N  N+DMVGHTG+ EATV A +  D+ ++ +  A++  GG  L+TADHGNAE+M            +   Q  T+HT +PVP    G G      +      G L ++A + + L G   P +
Sbjct:  320 HGLSQLRIAETEKYAHVTFFFNGGCESVFTN--EERIMVPSPQVATYDLQPEMSAHELTKTLIAAINSQDYHVIICNYANADMVGHTGNFEATVQAIECLDQCMQQVWQALKNNGGKLLITADHGNAEEM----------FSEATNQAHTAHTSEPVPFLYVGGG------WHFTHSEGSLIDIAPSLLALLGITPPPE 500          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_EHRRW (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Ehrlichia ruminantium (strain Welgevonden) GN=gpmI PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.145e-25
Identity = 71/191 (37.17%), Postives = 104/191 (54.45%), Query Frame = 2
Query:   26 SETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            +ET K+ HVTFF+NG R   F++  EE + IPS S  T+++ P+M A EI +   K I  +++  + +N  N+DMVGHTG+IEAT  A    D+ +  I+  I     I ++TADHGNAE+M              N    T+HTL PVP  +     P  +K    L NG L++VA T + +   + P +
Sbjct:  318 AETEKYAHVTFFFNGGREEVFEN--EERIIIPSPSVTTYDLVPEMSAYEITDTLIKKINLQKYSLIIINYANADMVGHTGNIEATKKAITTLDQCLGKILKCIHNTNYILVITADHGNAEEMFDVQ----------NNMPYTAHTLNPVPFVV--CNYPKKIK----LKNGRLSDVAPTILEILNIKQPEE 490          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_EHRRG (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Ehrlichia ruminantium (strain Gardel) GN=gpmI PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.145e-25
Identity = 71/191 (37.17%), Postives = 104/191 (54.45%), Query Frame = 2
Query:   26 SETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            +ET K+ HVTFF+NG R   F++  EE + IPS S  T+++ P+M A EI +   K I  +++  + +N  N+DMVGHTG+IEAT  A    D+ +  I+  I     I ++TADHGNAE+M              N    T+HTL PVP  +     P  +K    L NG L++VA T + +   + P +
Sbjct:  318 AETEKYAHVTFFFNGGREEVFEN--EERIIIPSPSVTTYDLVPEMSAYEITDTLIKKINLQKYSLIIINYANADMVGHTGNIEATKKAITTLDQCLGKILKCIHNTNYILVITADHGNAEEMFDVQ----------NNMPYTAHTLNPVPFVV--CNYPKKIK----LKNGRLSDVAPTILEILNIKQPEE 490          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_AERS4 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Aeromonas salmonicida (strain A449) GN=gpmI PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.145e-25
Identity = 71/191 (37.17%), Postives = 101/191 (52.88%), Query Frame = 2
Query:   26 SETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            SET K+ HVTFF+NG     F     E V  P  +  T+++QP+M + E+ ++   AI S ++  +  N PN DMVGHTG  +A V AC+A D  V  + +A+ +VGG  L+TADHGNAE M          L +   Q  T+HT  PVP+   G       +    L  G L+++A T + L G   P +
Sbjct:  328 SETEKYAHVTFFFNGGEESCFTGEDREIVASPKVA--TYDLQPEMSSEELTDKLVAAIKSGKYDTIICNYPNGDMVGHTGVFDAAVKACEAVDHCVGRVTEALAEVGGECLITADHGNAEKM----------LDEETGQAHTAHTNLPVPLIYFG-------RKAEVLEGGKLSDLAPTMLTLMGLPVPPE 499          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_SALTI (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Salmonella typhi GN=gpmI PE=3 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 1.495e-25
Identity = 73/191 (38.22%), Postives = 105/191 (54.97%), Query Frame = 2
Query:   26 SETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            SET K+ HVTFF+NG     F    EE + I S    T+++QP+M + E+ E+   AI S ++  +  N PN DMVGHTG +EA + A +A D  ++ +  A+E VGG  L+TADHGNAE M +   +G         Q  T+HT  PVP+   G       K    +  G L+++A T ++L G E P +
Sbjct:  332 SETEKYAHVTFFFNGGVEEPFAG--EERILINSPKVATYDLQPEMSSAELTEKLVAAIESGKYDTIICNYPNGDMVGHTGVMEAAIKAVEALDNCIEQVTKAVESVGGQLLITADHGNAEQM-RDPATG---------QEHTAHTNLPVPLIYVGE------KNVKAVEGGKLSDIAPTMLSLMGMEIPQE 504          
The following BLAST results are available for this feature:
BLAST of DC900149 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 274
Match NameE-valueIdentityDescription
GPMI_SALPA8.763e-2638.222,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_METMA8.763e-2638.422,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_ENT388.763e-2638.742,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SHEFN1.145e-2536.272,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_LEGPL1.145e-2534.672,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_LEGPH1.145e-2534.672,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_EHRRW1.145e-2537.172,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_EHRRG1.145e-2537.172,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_AERS41.145e-2537.172,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SALTI1.495e-2538.222,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionDC900149 VSS Citrus sinensis cDNA clone VS27V69 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900149 ID=DC900149; Name=DC900149; organism=Citrus sinensis; type=EST; length=793bp
TAATGGTGTCCGGACTTTTGCTTGCAGTGAGACTGTCAAGTTTGGACATG
TCACTTTCTTCTGGAATGGAAACCGCTCTGGGTATTTCGACTCGAATTTG
GAGGAATATGTGGAAATTCCTAGTGATTCTGGAATTACTTTCAATGTACA
GCCCAAGATGAAGGCTTTGGAGATTGCTGAAAGGGCAAAGAAGGCCATCC
TTAGTCGCAGGTTCCACCAGGTGCGTGTTAACCTACCAAATAGTGACATG
GTGGGGCACACGGGAGATATTGAGGCAACAGTGGTGGCATGCAAGGCTGC
TGATGAAGCTGTCAAGATAATCATTGATGCAATAGAGAAAGTTGGTGGAA
TATATCTTGTTACTGCAGATCATGGCAATGCTGAGGACATGGTCAAGAGG
AACAAATCTGGGGAGCCTCTTCTTAAGGATGGCAATATTCAAGTGCTCAC
GTCTCACACTCTTAAACCCGTTCCCATTGCAATCGGAGGTCCTGGACTGC
CAGATGATGTCAAGTTCCGCACAGATCTCCCTAATGGTGGGCTGGCCAAT
GTAGCAGCAACTTTTATCAATCTCCATGGATATGAGGCGCCTAGTGACTA
CGAGCCAAGTCTTATTGAAGTAACTGACGACTGAGAAGTAACTGACGACT
GGGCGAACAATGGATCGTCGCCTAGATTTTATAACTCCGGAGGAATTCCG
TTAAAACGTAAAACAATAAATTGAATTTTGGGGTCTTGAATTCATTTTGA
TACGCGTGCTGTTTTTCAGCTTACATTTCGATTGCTGTCTGTT
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