DC900149

Overview
NameDC900149
Unique NameDC900149
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length793
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_SALCH (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Salmonella choleraesuis GN=gpmI PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.495e-25
Identity = 73/191 (38.22%), Postives = 104/191 (54.45%), Query Frame = 2
Query:   26 SETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            SET K+ HVTFF+NG     F    EE + I S    T+++QP+M + E+ E+   AI S ++  +  N PN DMVGHTG +EA + A +A D  +  +  A+E VGG  L+TADHGNAE M +   +G         Q  T+HT  PVP+   G       K    +  G L+++A T ++L G E P +
Sbjct:  332 SETEKYAHVTFFFNGGVEEPFAG--EERILINSPKVATYDLQPEMSSAELTEKLVAAIESGKYDTIICNYPNGDMVGHTGVMEAAIKAVEALDNCIDQVTKAVESVGGQLLITADHGNAEQM-RDPATG---------QAHTAHTNLPVPLIYVGE------KNVKAVEGGKLSDIAPTMLSLMGMEIPQE 504          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_SYNJB (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Synechococcus sp. GN=gpmI PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.952e-25
Identity = 74/204 (36.27%), Postives = 109/204 (53.43%), Query Frame = 2
Query:    5 GVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVP-IAIGG-----PGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            G++    +ET K+ HVT+F+NG     F    E+ + + S    T++  P+M A+E+ ++A +AI  R +  V +N  N DMVGHTG+ EAT+ A +  D  +  ++ A+   GG  L+ ADHGNAE           L+ D N    T+HT  PVP I + G     PG   DVK R+   NG LA+VA T + + G   P +
Sbjct:  319 GLKQLRIAETEKYAHVTYFFNGGIEQPFPG--EDRILVQSPLVTTYDQAPEMSAVEVTDKAIEAIARREYSLVVLNYANPDMVGHTGNYEATIRALETVDRCLGRLLAAVVDAGGTTLILADHGNAE-----------LMWDENGNPWTAHTTNPVPCILVEGERRKIPGCGGDVKLRS---NGTLADVAPTLLEILGLPQPPE 506          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_GEOTN (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=gpmI PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.952e-25
Identity = 69/199 (34.67%), Postives = 112/199 (56.28%), Query Frame = 2
Query:    2 NGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            +G+R    +ET K+ HVTFF +G R   F    E+ + I S    T++++P+M A E+ E   K I + ++  + +N  N DMVGH+G +E T+ A +A DE +  ++DAI + GGI ++TADHGNA++++     G+P          T+HT  PVP+ +   G    ++ R D   G L ++A T ++L G   P +
Sbjct:  324 HGLRQLRIAETEKYPHVTFFMSGGREEKFPG--EDRILINSPKVATYDLKPEMSAYEVTEALLKEIAADKYDAIILNYANPDMVGHSGMLEPTIKAVEAVDECLGKVVDAILEKGGIAIITADHGNADEVL--TPEGKP---------QTAHTTNPVPVIVTKHG----IELRKD---GILGDLAPTMLDLLGLPQPKE 502          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_BACLD (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=gpmI PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.952e-25
Identity = 69/199 (34.67%), Postives = 109/199 (54.77%), Query Frame = 2
Query:    2 NGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            NG++    +ET K+ HVTFF +G R   F    EE + I S    T++++P+M A E+ +   K I + + + + +N  N DMVGH+G +E TV A +A DE +  ++DAI   GG  ++TADHGNA+ ++   + G+P          T+HT  PVP+ +   G+       T    G L ++A T ++L G E P +
Sbjct:  324 NGLKQLRIAETEKYPHVTFFMSGGREEKFPG--EERILIDSPKVATYDLKPEMSAYEVKDALVKEIEAEKHNAIILNFANPDMVGHSGKVEPTVKAIEAVDECLGEVVDAILAKGGYAIITADHGNADVLI--TEEGKP---------HTAHTTNPVPVIVTKEGV-------TLREGGILGDLAPTLLDLLGVEKPKE 502          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_COLP3 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=gpmI PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.550e-25
Identity = 68/197 (34.52%), Postives = 110/197 (55.84%), Query Frame = 2
Query:   26 SETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSDYEPSLI 616
            SET K+ HVTFF++G +   F    EE + +PS    T+++QP+M +  + ++   AI S ++  +  N PN DMVGHTG  +A V AC+A D  V  ++ A +  GG  L+TADHGNAE M       +P+    + Q  T+HT +PVP+   G       +  +   +G L++++ + ++L G E P +   S++
Sbjct:  338 SETEKYAHVTFFFSGGKEDMFTG--EERILVPSPDVATYDLQPEMNSTLLTDKLVGAIESGKYDFIVCNYPNGDMVGHTGSFDAAVKACEAVDTCVGRVVKAAQDNGGECLITADHGNAEQM------QDPV----SGQAHTAHTCEPVPLIYVG-------RNASPAASGTLSDISPSVLHLMGMEQPQEMTGSVL 515          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_VESOH (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Vesicomyosocius okutanii subsp. Calyptogena okutanii (strain HA) GN=gpmI PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.349e-25
Identity = 70/198 (35.35%), Postives = 106/198 (53.54%), Query Frame = 2
Query:    5 GVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            G+     +ET K+ HVTFF NG     F  N EE V IPS    T+++QP+M A E+ +   + I S+++  +  N  N+DMVGH+G ++AT+ A +A D  + II  A+  +GG  L+TADHGNAE M+    +          +V T+HT  PVP+        D +K       G L+++A T + +   E P +
Sbjct:  321 GMTQLRIAETEKYAHVTFFLNGGIEQAF--NGEERVLIPSPDVATYDLQPEMSAFELTDALVENIESQKYDLIICNFANTDMVGHSGKLDATIKAVEAVDTCLGIIYKAMFAIGGEMLITADHGNAEQMINPQTN----------EVHTAHTNNPVPLIFVSNRKADIMK----PGKGALSDIAPTLLAMMDIEKPDE 502          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_METFK (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=gpmI PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.349e-25
Identity = 60/165 (36.36%), Postives = 96/165 (58.18%), Query Frame = 2
Query:    2 NGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPG 496
            +G++    +ET K+ HVTFF+NG     F    E+ + +PS    T+++QP+M A E+ +R + AILSR++  +  N  N DMVGH+GD+ A++ A +  D  +  I+ A+E +GG  ++TADHGN E M +  ++ +P  +    QV      KP  +A  G G
Sbjct:  324 HGLKQLRIAETEKYPHVTFFFNGGEEQVFAG--EDRILVPSPKVATYDLQPEMSAYEVTDRLEAAILSRKYDAIICNYANCDMVGHSGDLSASIKAVETIDTCIARIVKAMESIGGQMIITADHGNVEQM-RDYENNQPHTQHTTNQVPLFFIGKPATLAAPGTG 485          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_MICAN (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Microcystis aeruginosa (strain NIES-843) GN=gpmI PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 5.680e-25
Identity = 75/202 (37.13%), Postives = 106/202 (52.48%), Query Frame = 2
Query:    5 GVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVP-IAIGG-----PGLPDDVKFRTDLPNGGLANVAATFINLHGYEAP 592
            G++ F C+ET K+ HVT+F+NG     F+  + E   IPS    T++  P M A  +      AI    +  V VN  N DMVGHTG ++A + A +  D  +  ++ ++ K+GG  L+TADHGNAE MV  ++SG P          T+HT  PVP I I G     PG   DV+ R D   G LA++A T + +     P
Sbjct:  320 GLKQFRCAETEKYPHVTYFFNGGLEKPFEGEVREL--IPSPKVATYDQAPAMSAAAVTTSVCGAIEQGIYSLVVVNYANPDMVGHTGILDAAMKAVETVDLCLAKLLSSVNKLGGTVLITADHGNAETMV--DESGNP---------WTAHTTNPVPLILIEGEGRKIPGHGGDVQLRDD---GRLADIAPTILEILSIPVP 505          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_GEOKA (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Geobacillus kaustophilus GN=gpmI PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 5.680e-25
Identity = 71/199 (35.68%), Postives = 109/199 (54.77%), Query Frame = 2
Query:    2 NGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            +G+R    +ET K+ HVTFF +G R   F    E+ + I S    T++++P+M A E+ +   K I + ++  + +N  N DMVGH+G +E T+ A +A DE +  ++DAI   GGI ++TADHGNA+         E L  DG  Q  T+HT  PVP+ +   G    +K R     G L ++A T ++L G   P +
Sbjct:  324 HGLRQLRIAETEKYPHVTFFMSGGREEKFPG--EDRILINSPKVPTYDLKPEMSAYEVTDALLKEIEADKYDAIILNYANPDMVGHSGKLEPTIKAVEAVDECLGKVVDAILAKGGIAIITADHGNAD---------EVLTPDGKPQ--TAHTTNPVPVIVTKKG----IKLR---DGGILGDLAPTMLDLLGLPQPKE 502          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_BACSU (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Bacillus subtilis GN=gpmI PE=1 SV=4)

HSP 1 Score: 114.775 bits (286), Expect = 5.680e-25
Identity = 69/199 (34.67%), Postives = 109/199 (54.77%), Query Frame = 2
Query:    2 NGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 598
            +G++    +ET K+ HVTFF +G R   F    EE + I S    T++++P+M A E+ +   K I + +   + +N  N DMVGH+G +E T+ A +A DE +  ++DAI   GG  ++TADHGNA+ ++   +SGEP          T+HT  PVP+ +   G+       T    G L ++A T ++L G E P +
Sbjct:  324 HGLKQLRIAETEKYPHVTFFMSGGREAEFPG--EERILINSPKVATYDLKPEMSAYEVKDALVKEIEADKHDAIILNFANPDMVGHSGMVEPTIKAIEAVDECLGEVVDAILAKGGHAIITADHGNADILI--TESGEP---------HTAHTTNPVPVIVTKEGI-------TLREGGILGDLAPTLLDLLGVEKPKE 502          
The following BLAST results are available for this feature:
BLAST of DC900149 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 274
Match NameE-valueIdentityDescription
GPMI_SALCH1.495e-2538.222,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SYNJB1.952e-2536.272,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_GEOTN1.952e-2534.672,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_BACLD1.952e-2534.672,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_COLP32.550e-2534.522,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_VESOH4.349e-2535.352,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_METFK4.349e-2536.362,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_MICAN5.680e-2537.132,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_GEOKA5.680e-2535.682,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_BACSU5.680e-2534.672,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionDC900149 VSS Citrus sinensis cDNA clone VS27V69 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900149 ID=DC900149; Name=DC900149; organism=Citrus sinensis; type=EST; length=793bp
TAATGGTGTCCGGACTTTTGCTTGCAGTGAGACTGTCAAGTTTGGACATG
TCACTTTCTTCTGGAATGGAAACCGCTCTGGGTATTTCGACTCGAATTTG
GAGGAATATGTGGAAATTCCTAGTGATTCTGGAATTACTTTCAATGTACA
GCCCAAGATGAAGGCTTTGGAGATTGCTGAAAGGGCAAAGAAGGCCATCC
TTAGTCGCAGGTTCCACCAGGTGCGTGTTAACCTACCAAATAGTGACATG
GTGGGGCACACGGGAGATATTGAGGCAACAGTGGTGGCATGCAAGGCTGC
TGATGAAGCTGTCAAGATAATCATTGATGCAATAGAGAAAGTTGGTGGAA
TATATCTTGTTACTGCAGATCATGGCAATGCTGAGGACATGGTCAAGAGG
AACAAATCTGGGGAGCCTCTTCTTAAGGATGGCAATATTCAAGTGCTCAC
GTCTCACACTCTTAAACCCGTTCCCATTGCAATCGGAGGTCCTGGACTGC
CAGATGATGTCAAGTTCCGCACAGATCTCCCTAATGGTGGGCTGGCCAAT
GTAGCAGCAACTTTTATCAATCTCCATGGATATGAGGCGCCTAGTGACTA
CGAGCCAAGTCTTATTGAAGTAACTGACGACTGAGAAGTAACTGACGACT
GGGCGAACAATGGATCGTCGCCTAGATTTTATAACTCCGGAGGAATTCCG
TTAAAACGTAAAACAATAAATTGAATTTTGGGGTCTTGAATTCATTTTGA
TACGCGTGCTGTTTTTCAGCTTACATTTCGATTGCTGTCTGTT
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