CN186056
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN186056 vs. ExPASy Swiss-Prot
Match: CH25H_HUMAN (Cholesterol 25-hydroxylase OS=Homo sapiens GN=CH25H PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.119e-14 Identity = 40/116 (34.48%), Postives = 61/116 (52.59%), Query Frame = -1 Query: 401 WLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFATIVGPAITGPHLMTLWLWMVLRVLETVEAHCGYHFPWSLSNFIPL--YGGADFHDYHHRLLYTKSGNYSSTFVYIAWIFGT 742 WLY+ H VHH+ ++ F L ++Y E+ LGF ++ + G H +T + V+ + +VE H GY+FPWS +P YGG HD HH + N++ F + I GT Sbjct: 151 WLYRTFHKVHHQNSSSFALATQYMSVWELFSLGFFDMMNVTLLGCHPLTTLTFHVVNIWLSVEDHSGYNFPWSTHRLVPFGWYGGVVHHDLHHSHF---NCNFAPYFTHWDKILGT 263
BLAST of CN186056 vs. ExPASy Swiss-Prot
Match: CH25H_PIG (Cholesterol 25-hydroxylase OS=Sus scrofa GN=CH25H PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.949e-14 Identity = 39/116 (33.62%), Postives = 61/116 (52.59%), Query Frame = -1 Query: 401 WLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFATIVGPAITGPHLMTLWLWMVLRVLETVEAHCGYHFPWSLSNFIPL--YGGADFHDYHHRLLYTKSGNYSSTFVYIAWIFGT 742 WLY+ H +HH+ ++ F L ++Y E+L LG +V + H +T+ ++ V+ + +VE H GY FPWS +P YGG HD HH + N++ F + I GT Sbjct: 151 WLYRTFHKMHHQNSSSFALATQYMSVGELLSLGVFDMVNIMLLRCHPLTVLIFHVINIWLSVEDHSGYDFPWSAHRLVPFGWYGGVTHHDLHHSQF---NCNFAPYFTHWDKILGT 263
BLAST of CN186056 vs. ExPASy Swiss-Prot
Match: CH25H_MOUSE (Cholesterol 25-hydroxylase OS=Mus musculus GN=Ch25h PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.949e-14 Identity = 35/93 (37.63%), Postives = 53/93 (56.99%), Query Frame = -1 Query: 470 WLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFATIVGPAITGPHLMTLWLWMVLRVLETVEAHCGYHFPWSLSNFIPL--YGGADFHDYHH 742 WLY+ H VHH+ ++ F L ++Y E+L L F ++ A+ H +T++ + V+ + +VE H GY FPWS +P YGG HD HH Sbjct: 151 WLYRTFHKVHHQNSSSFALATQYMSFWELLSLTFFDVLNVAVLRCHPLTIFTFHVINIWLSVEDHSGYDFPWSTHRLVPFGWYGGVAHHDMHH 243
BLAST of CN186056 vs. ExPASy Swiss-Prot
Match: CH25H_RAT (Cholesterol 25-hydroxylase OS=Rattus norvegicus GN=Ch25h PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.185e-13 Identity = 35/93 (37.63%), Postives = 53/93 (56.99%), Query Frame = -1 Query: 470 WLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFATIVGPAITGPHLMTLWLWMVLRVLETVEAHCGYHFPWSLSNFIPL--YGGADFHDYHH 742 WLY+ H VHH+ ++ F L ++Y E+L L F ++ A+ H +T+ ++ V+ + +VE H GY FPWS +P YGG HD HH Sbjct: 151 WLYRTFHKVHHQNSSSFALATQYMSVWELLSLTFFDVLNVAMLQCHPLTILVFHVVNIWLSVEDHSGYDFPWSTHRLVPFGWYGGVAHHDLHH 243 The following BLAST results are available for this feature:
BLAST of CN186056 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN186056 ID=CN186056; Name=CN186056; organism=Citrus sinensis; type=EST; length=745bpback to top |