DC900143
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900143 vs. ExPASy Swiss-Prot
Match: CIAO1_ASHGO (Probable cytosolic iron-sulfur protein assembly protein 1 OS=Ashbya gossypii GN=CIA1 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 6.336e-14 Identity = 67/216 (31.02%), Postives = 100/216 (46.30%), Query Frame = 1 Query: 256 CMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHT--LTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLV--AIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWR 891 C + ++GLL TGS D+ +K V + + AH+ V ++ + S D +V IW R + S L ++ ++ V ++A S D +L + S D S+ WE D++S F LQ H V +V A L+ S S D T+R+W AE EC AVL GH G V C + E+ G + S S D T ++WR Sbjct: 17 CWSVDISKGLLATGSADRKIKLVDVRNFKLVEELDDTAHKKAVRSVAWRPHCNVLAAGSFDTTVSIWGRDDDDYSGETELLAVIEGHENEVKSVAWSH--DGAYLATCSRDKSVWIWEADELSEEFECNSVLQEHSQDVKHIVWHASRLLLASSSYDDTVRIW--AEQDDDWECAAVLSGHGGTVWC----SDFERAETGIRLCSGSDDTTVRIWR 224
BLAST of DC900143 vs. ExPASy Swiss-Prot
Match: SEL10_CAEBR (F-box/WD repeat-containing protein sel-10 OS=Caenorhabditis briggsae GN=sel-10 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.411e-13 Identity = 63/213 (29.58%), Postives = 98/213 (46.01%), Query Frame = 1 Query: 250 VSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 888 ++CM ++ LL TGS D T+K W + D + H V ++Q ++ + S+D +VK+WR L TL+ S+V +A++ N L +GS D ++ W+ + G H LQGH AV C+ ++ SG D T+++W G +CL L GH V L E +V S SLD + +VW Sbjct: 261 ITCMQIHN--DLLVTGSDDNTLKVWSIDDGEVK--HTLNGHSGGVWTSQISQCGRYIVSGSTDRTVKVWRA----EDGFLLHTLQGHTSTVRCMAMA----NTTLVTGSRDCTLRVWD---IETGL-HVRTLQGHQAAVRCVQFDGNIVVSGGYDFTVKIWDAFSG----KCLRTLIGHSNRVYSLLYESERS------IVCSGSLDTSIRVW 447
BLAST of DC900143 vs. ExPASy Swiss-Prot
Match: CIAO1_YEAST (Cytosolic iron-sulfur protein assembly protein 1 OS=Saccharomyces cerevisiae GN=CIA1 PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.411e-13 Identity = 66/225 (29.33%), Postives = 104/225 (46.22%), Query Frame = 1 Query: 262 AFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSF--VAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRR---VYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLV--AIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVKVMPDQE 915 +F ++G+L TGS D+ +K V T +D AH+ + ++ + S D +V IW + R L ++ ++ V +A S+ D Y+L + S D S+ WE D+ + LQ H V ++ E L+ S S D T+R+W+ + EC+AVL+GH G V S + +K F + S S D T +VW K M D E Sbjct: 19 SFDFSQGILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSN--DGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDD--WECVAVLNGHEGTV----WSSDFDKTEGVFRLCSGSDDSTVRVW--KYMGDDE 233
BLAST of DC900143 vs. ExPASy Swiss-Prot
Match: LIS1_PONAB (Platelet-activating factor acetylhydrolase IB subunit alpha OS=Pongo abelii GN=PAFAH1B1 PE=2 SV=3) HSP 1 Score: 77.411 bits (189), Expect = 1.843e-13 Identity = 79/331 (23.87%), Postives = 133/331 (40.18%), Query Frame = 1 Query: 37 ERGFIKARHGEVRAILAHG--NMLFTTHKDCKIRIWNXTVSDNFRTKK-----VTTLPRRSS-----------------FLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIW-------RRVYRENSHTLTMTLKFQQSSVNALALSSFFDNY-------FLYSGSSDGSINFWEKDKMSGGF------NHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVK 897 E+ + V ++ H +++ + +D I++W+ D RT K + +P S F F T H VS +A + + S DKT+K W V + CV +F H V + NQD + +CS+D +V++W + RE+ H + +SS ++++ ++ + FL SGS D +I W+ +S G H +++G F + K I S ++D T+RVW C+ L+ H SL+ K V + S+DQT KVW + Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSIQDIPFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV--QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWD---VSTGMCLMTLVGHDNWVRGVLFH-----SGGKFILSCADDKTLRVWDYKN----KRCMKTLNAHEH----FVTSLDFHKTAP--YVVTGSVDQTVKVWECR 410
BLAST of DC900143 vs. ExPASy Swiss-Prot
Match: SEL10_CAEEL (F-box/WD repeat-containing protein sel-10 OS=Caenorhabditis elegans GN=sel-10 PE=1 SV=3) HSP 1 Score: 76.6406 bits (187), Expect = 3.144e-13 Identity = 64/224 (28.57%), Postives = 100/224 (44.64%), Query Frame = 1 Query: 238 HRD-CVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVD------SFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 888 H D ++CM + + +L TGS D T+K W C+D + V H V ++Q ++ + S+D +VK+W V +L TL+ S+V +A++ L +GS D ++ W+ + SG H L GH AV C+ + SG D T+++W G C+ L GH V L E +V S SLD + +VW Sbjct: 254 HEDHVITCMQIH--DDVLVTGSDDNTLKVW--------CIDKGEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTV----DGSLLHTLQGHTSTVRCMAMAGSI----LVTGSRDTTLRVWDVE--SG--RHLATLHGHHAAVRCVQFDGTTVVSGGYDFTVKIWNAHTG----RCIRTLTGHNNRVYSLLFESERS------IVCSGSLDTSIRVW 445
BLAST of DC900143 vs. ExPASy Swiss-Prot
Match: LIS1_MACFA (Platelet-activating factor acetylhydrolase IB subunit alpha OS=Macaca fascicularis GN=PAFAH1B1 PE=2 SV=3) HSP 1 Score: 76.6406 bits (187), Expect = 3.144e-13 Identity = 79/331 (23.87%), Postives = 131/331 (39.58%), Query Frame = 1 Query: 37 ERGFIKARHGEVRAILAHG--NMLFTTHKDCKIRIWNXTVSDNFRTKKVTTLPRRS----------------------SFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIW-------RRVYRENSHTLTMTLKFQQSSVNALALSSFFDNY-------FLYSGSSDGSINFWEKDKMSGGF------NHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVK 897 E+ + V ++ H +++ + +D I++W+ D RT K T + F F T H VS +A L + S DKT+K W V + CV +F H V + NQD + +CS+D +V++W + RE+ H + +SS ++++ ++ + FL SGS D +I W+ +S G H +++G F + K I S ++D T+RVW C+ L+ H SL+ K V + S+DQT KVW + Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLTSCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHLVSASRDKTIKMWEV--QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWD---VSTGMCLMTLVGHDNWVRGVLFH-----SGGKFILSCADDKTLRVWDYKN----KRCMKTLNAHEH----FVTSLDFHKTAP--YVVTGSVDQTVKVWECR 410
BLAST of DC900143 vs. ExPASy Swiss-Prot
Match: LIS1_RAT (Platelet-activating factor acetylhydrolase IB subunit alpha OS=Rattus norvegicus GN=Pafah1b1 PE=1 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 5.363e-13 Identity = 78/331 (23.56%), Postives = 131/331 (39.58%), Query Frame = 1 Query: 37 ERGFIKARHGEVRAILAHG--NMLFTTHKDCKIRIWNXTVSDNFRTKKVTTLPRRS----------------------SFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIW-------RRVYRENSHTLTMTLKFQQSSVNALALSSFFDNY-------FLYSGSSDGSINFWEKDKMSGGF------NHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVK 897 E+ + V ++ H +++ + +D I++W+ D RT K T + F F T H VS +A + + S DKT+K W V + CV +F H V + NQD + +CS+D +V++W + RE+ H + +SS ++++ ++ + FL SGS D +I W+ +S G H +++G F + K I S ++D T+RVW C+ L+ H SL+ K V + S+DQT KVW + Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV--QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWD---VSTGMCLMTLVGHDNWVRGVLFH-----SGGKFILSCADDKTLRVWDYKN----KRCMKTLNAHEH----FVTSLDFHKTAP--YVVTGSVDQTVKVWECR 410
BLAST of DC900143 vs. ExPASy Swiss-Prot
Match: LIS1_PANTR (Platelet-activating factor acetylhydrolase IB subunit alpha OS=Pan troglodytes GN=PAFAH1B1 PE=2 SV=3) HSP 1 Score: 75.8702 bits (185), Expect = 5.363e-13 Identity = 79/331 (23.87%), Postives = 130/331 (39.27%), Query Frame = 1 Query: 37 ERGFIKARHGEVRAILAHG--NMLFTTHKDCKIRIWNXTVSDNFRTKKVTTLPRRS----------------------SFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIW-------RRVYRENSHTLTMTLKFQQSSVNALALSSFFDNY-------FLYSGSSDGSINFWEKDKMSGGF------NHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVK 897 E+ + V ++ H +++ + +D I++W+ D RT K T + F F T H VS +A + + S DKT+K W V + CV +F H V + NQD + +CS+D +V++W + RE+ H + +SS ++++ ++ + FL SGS D +I W+ +S G H +++G F + K I S ++D T+RVW C+ L+ H V L VV GF +DQT KVW + Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV--QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWD---VSTGMCLMTLVGHDNWVRGVLFH-----SGGKFILSCADDKTLRVWDYKN----KRCMKTLNAHEHFVTSLDFHKTAPYVVTGF------VDQTVKVWECR 410
BLAST of DC900143 vs. ExPASy Swiss-Prot
Match: LIS1_MOUSE (Platelet-activating factor acetylhydrolase IB subunit alpha OS=Mus musculus GN=Pafah1b1 PE=1 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 5.363e-13 Identity = 78/331 (23.56%), Postives = 131/331 (39.58%), Query Frame = 1 Query: 37 ERGFIKARHGEVRAILAHG--NMLFTTHKDCKIRIWNXTVSDNFRTKKVTTLPRRS----------------------SFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIW-------RRVYRENSHTLTMTLKFQQSSVNALALSSFFDNY-------FLYSGSSDGSINFWEKDKMSGGF------NHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVK 897 E+ + V ++ H +++ + +D I++W+ D RT K T + F F T H VS +A + + S DKT+K W V + CV +F H V + NQD + +CS+D +V++W + RE+ H + +SS ++++ ++ + FL SGS D +I W+ +S G H +++G F + K I S ++D T+RVW C+ L+ H SL+ K V + S+DQT KVW + Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV--QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWD---VSTGMCLMTLVGHDNWVRGVLFH-----SGGKFILSCADDKTLRVWDYKN----KRCMKTLNAHEH----FVTSLDFHKTAP--YVVTGSVDQTVKVWECR 410
BLAST of DC900143 vs. ExPASy Swiss-Prot
Match: LIS1_HUMAN (Platelet-activating factor acetylhydrolase IB subunit alpha OS=Homo sapiens GN=PAFAH1B1 PE=1 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 5.363e-13 Identity = 78/331 (23.56%), Postives = 131/331 (39.58%), Query Frame = 1 Query: 37 ERGFIKARHGEVRAILAHG--NMLFTTHKDCKIRIWNXTVSDNFRTKKVTTLPRRS----------------------SFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIW-------RRVYRENSHTLTMTLKFQQSSVNALALSSFFDNY-------FLYSGSSDGSINFWEKDKMSGGF------NHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVK 897 E+ + V ++ H +++ + +D I++W+ D RT K T + F F T H VS +A + + S DKT+K W V + CV +F H V + NQD + +CS+D +V++W + RE+ H + +SS ++++ ++ + FL SGS D +I W+ +S G H +++G F + K I S ++D T+RVW C+ L+ H SL+ K V + S+DQT KVW + Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV--QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWD---VSTGMCLMTLVGHDNWVRGVLFH-----SGGKFILSCADDKTLRVWDYKN----KRCMKTLNAHEH----FVTSLDFHKTAP--YVVTGSVDQTVKVWECR 410 The following BLAST results are available for this feature:
BLAST of DC900143 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 40
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900143 ID=DC900143; Name=DC900143; organism=Citrus sinensis; type=EST; length=1193bpback to top |