CN186040
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186040 vs. ExPASy Swiss-Prot
Match: ZDS_SYNY3 (Zeta-carotene desaturase OS=Synechocystis sp. (strain PCC 6803) GN=crtQ PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.011e-24 Identity = 64/163 (39.26%), Postives = 90/163 (55.21%), Query Frame = 1 Query: 229 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKVAAWKDGDGNWYETGLHIFFGAYPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAII--------GGQAYVEAQDGLTVQEW 693 ++V I GAGLAG++TA L DAGH+ L EAR +GGKV +W DGDGN E GLH+FFG Y N+ NL ++G L+ KEH+ F N+ G DF + AP NG+ A +++ T +K+ +I L + I G + D ++ EW Sbjct: 1 MRVAIVGAGLAGMATAVELVDAGHEVELYEARSFIGGKVGSWVDGDGNHIEMGLHVFFGCYYNLFNLMEKVGAKQNLRLKEHTHTFV--NQGGRIGELDFRFLTGAPFNGLKAFFTTSQLDT-KDKIANSIALATSPIVRGLVDFDGAMKTIRDLDRISFAEW 160
BLAST of CN186040 vs. ExPASy Swiss-Prot
Match: ZDS_MAIZE (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Zea mays GN=ZDS1 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.235e-22 Identity = 60/133 (45.11%), Postives = 81/133 (60.90%), Query Frame = 1 Query: 229 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKVAAWKDGDGNWYETGLHIFFGAYPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGL 627 LKV I GAGLAG+STA L D GH+ L E+R +GGKV ++ D GN E GLH+FFG Y N+ L ++G ++ L KEH+ F NK G DF + APL+GI A LR N++ + +K + A+ L Sbjct: 65 LKVAIIGAGLAGMSTAVELLDQGHEVDLYESRPFIGGKVGSFVDRQGNHIEMGLHVFFGCYSNLFRLMKKVGADNNLLVKEHTHTFV--NKGGTIGELDFRFPVGAPLHGIQAFLRTNQLKVY-DKARNAVAL 194
BLAST of CN186040 vs. ExPASy Swiss-Prot
Match: ZDS_TARER (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Tagetes erecta PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.107e-22 Identity = 62/162 (38.27%), Postives = 88/162 (54.32%), Query Frame = 1 Query: 229 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKVAAWKDGDGNWYETGLHIFFGAYPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPE-KVKFAIGLLPAI------IGGQAYVEAQDGLTVQEW 693 LKV I GAGLAG+STA L D GH+ + E+R +GGKV ++ D GN E GLH+FFG Y N+ L ++G L K+H+ F N+ GE DF + APL+GI A L N++ T+ + + A+ L P + G + D ++ EW Sbjct: 83 LKVAIIGAGLAGMSTAVELLDQGHEVDIYESRTFIGGKVGSFVDKQGNHIEMGLHVFFGCYNNLFRLLKKVGAEKNLLVKDHTHTFV--NRGGELGELDFRFPVGAPLHGINAFLTTNQLKTYDKARNAVALALSPVVRALVDPDGAMTQIRNLDNISFSEW 242
BLAST of CN186040 vs. ExPASy Swiss-Prot
Match: ZDS_CAPAN (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Capsicum annuum GN=ZDS PE=1 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.594e-22 Identity = 60/133 (45.11%), Postives = 80/133 (60.15%), Query Frame = 1 Query: 229 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKVAAWKDGDGNWYETGLHIFFGAYPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGL 627 LKV I GAGLAG+STA L D GH+ + E+R +GGKV ++ D GN E GLH+FFG Y N+ L ++G L KEH+ F NK GE DF + APL+GI A L N++ T+ +K + A+ L Sbjct: 80 LKVAIIGAGLAGMSTAVELLDQGHEVDIYESRTFIGGKVGSFVDKRGNHIEMGLHVFFGCYNNLFRLMKKVGAEKNLLVKEHTHTFV--NKGGEIGELDFRFPVGAPLHGINAFLSTNQLKTY-DKARNAVAL 209
BLAST of CN186040 vs. ExPASy Swiss-Prot
Match: ZDS_SOLLC (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Solanum lycopersicum GN=ZDS PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.007e-22 Identity = 68/193 (35.23%), Postives = 97/193 (50.26%), Query Frame = 1 Query: 142 RPDIDNTSNFLEAAYLSSSFRTSPRPSK--PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKVAAWKDGDGNWYETGLHIFFGAYPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPE-KVKFAIGLLPAI------IGGQAYVEAQDGLTVQEW 693 R D+D+ + + F P + LKV I GAGLAG+STA L D GH+ + E+R +GGKV ++ D GN E GLH+FFG Y N+ L ++G L KEH+ F NK GE DF + APL+GI A L N++ + + + A+ L P + G + D ++ EW Sbjct: 49 RADLDSMVSDMSTNAPKGLFPPEPEHYRGPKLKVAIIGAGLAGMSTAVELLDQGHEVDIYESRTFIGGKVGSFVDRRGNHIEMGLHVFFGCYNNLFRLLKKVGAEKNLLVKEHTHTFV--NKGGEIGELDFRFPVGAPLHGINAFLSTNQLKIYDKARNAVALALSPVVRALVDPDGALQQIRDLDNVSFSEW 239
BLAST of CN186040 vs. ExPASy Swiss-Prot
Match: ZDS_NARPS (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Narcissus pseudonarcissus GN=ZDS1 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.046e-21 Identity = 62/163 (38.04%), Postives = 92/163 (56.44%), Query Frame = 1 Query: 229 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKVAAWKDGDGNWYETGLHIFFGAYPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGL-----LPAII---GGQAYVEAQDGLTVQEW 693 LKV I GAGLAG+STA L D GH+ + E+R +GGKV ++ D GN E GLH+FFG Y N+ L ++G ++ L K+H+ F N+ GE DF + APL+GI A L N++ + +K + A+ L + A+I G + D ++ +W Sbjct: 65 LKVAIIGAGLAGMSTAVELLDQGHEVDIYESRQFIGGKVGSFVDKRGNHIEMGLHVFFGCYNNLFRLMKKVGADENLLVKDHTHTFV--NRGGEIGELDFRLPMGAPLHGIRAFLTTNQLKPY-DKARNAVALALSPVVRALIDPNGAMQDIRNLDNISFSDW 224
BLAST of CN186040 vs. ExPASy Swiss-Prot
Match: ZDS_ANASP (Zeta-carotene desaturase OS=Anabaena sp. (strain PCC 7120) GN=crtQ PE=3 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 1.784e-21 Identity = 58/133 (43.61%), Postives = 79/133 (59.40%), Query Frame = 1 Query: 229 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKVAAWKDGDGNWYETGLHIFFGAYPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGL 627 ++V I GAGLAGL+TA LADAG + + E+R +GGKV +W DGDGN E GLH+FFG Y + L ++G L+ KEH+ F NK G DF AP NG+ A ++ L+ +K++ AI L Sbjct: 1 MRVAIVGAGLAGLATAIDLADAGCEVQIFESRPFVGGKVGSWIDGDGNHVEMGLHVFFGCYYQLFELMNKVGAFSHLRLKEHTHTFV--NKGGRTGALDFRFFTGAPFNGLKAFFTTSQ-LSLQDKLQNAIAL 130
BLAST of CN186040 vs. ExPASy Swiss-Prot
Match: ZDS_ARATH (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Arabidopsis thaliana GN=ZDS1 PE=2 SV=3) HSP 1 Score: 99.3673 bits (246), Expect = 1.972e-20 Identity = 64/195 (32.82%), Postives = 96/195 (49.23%), Query Frame = 1 Query: 136 YPRPDIDNTSNFLEAAYLSSSFRTSPRPSK--PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKVAAWKDGDGNWYETGLHIFFGAYPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPE-KVKFAIGLLPAI------IGGQAYVEAQDGLTVQEW 693 Y +D+ + + F P P K LKV I GAGLAG+STA L D GH+ + ++R +GGKV ++ D GN E GLH+FFG Y N+ L ++G L K+H+ F NK G DF + AP++GI A L N++ + + + A+ L P + G + D ++ +W Sbjct: 24 YVNSSLDSDVSDMSVNAPKGLFPPEPVPYKGPKLKVAIIGAGLAGMSTAVELLDQGHEVDIYDSRTFIGGKVGSFVDRRGNHIEMGLHVFFGCYNNLFRLMKKVGAEKNLLVKDHTHTFI--NKDGTIGELDFRFPVGAPIHGIRAFLVTNQLKPYDKLRNSLALALSPVVKALVDPDGAMRDIRNLDSISFSDW 216 The following BLAST results are available for this feature:
BLAST of CN186040 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186040 ID=CN186040; Name=CN186040; organism=Citrus sinensis; type=EST; length=695bpback to top |