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Overview
Name | DC900136 |
Unique Name | DC900136 |
Type | EST |
Organism | Citrus sinensis (Sweet orange) |
Sequence length | 305 |
Libraries
Library Name | Type |
VSS | cdna_library |
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900136 vs. ExPASy Swiss-Prot
Match: PTPLB_MOUSE (Protein-tyrosine phosphatase-like member B OS=Mus musculus GN=Ptplb PE=2 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.491e-11 Identity = 28/67 (41.79%), Postives = 47/67 (70.15%), Query Frame = 1 Query: 4 KLPLIYTALPYIKESETYCLRMPNKWNFSFDYFYAAILVLGFYVPGSPHMYTYMLGQRKKALSKSKK 204
+L IY ALP+++++ Y + +PNK+NFSFDY IL++ Y+P P +Y +M+ QR+K LS +++
Sbjct: 183 ELLTIYAALPFVRQAGLYSISLPNKYNFSFDYHAFLILIMISYIPLFPQLYFHMIHQRRKVLSHTEE 249
The following BLAST results are available for this feature:
BLAST of DC900136 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 ( BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match Name | E-value | Identity | Description | |
PTPLB_MOUSE | 7.491e-11 | 41.79 | Protein-tyrosine phosphatase-like member B OS=Mus ... | [more] |
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Properties
Property Name | Value |
Genbank description | DC900136 VSS Citrus sinensis cDNA clone VS27V55 5, mRNA sequence. |
Sequences
The
following sequences are available for this feature:
EST sequence >DC900136 ID=DC900136; Name=DC900136; organism=Citrus sinensis; type=EST; length=305bp GTGAAGTTGCCTCTTATTTACACTGCCCTTCCATACATAAAAGAATCCGA GACGTATTGTCTTAGAATGCCAAACAAATGGAATTTCTCTTTTGACTACT TCTACGCTGCAATTCTTGTGCTTGGATTCTATGTGCCAGGTAGTCCTCAT ATGTATACATATATGCTTGGGCAGAGGAAGAAAGCCCTTTCGAAATCGAA AAAAGAGTAAAATGGTTTTTTAACTGCAATGTCTATCAGTGTATCCTATC AAAGATCTTGATAGAACTTTTGTTTGTTTATAATAATTAACCTAACCATT TCCTC back to top
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