CN186026

Overview
NameCN186026
Unique NameCN186026
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length775
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186026 vs. ExPASy Swiss-Prot
Match: UB2L3_BOVIN (Ubiquitin-conjugating enzyme E2 L3 OS=Bos taurus GN=UBE2L3 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.097e-21
Identity = 40/97 (41.24%), Postives = 63/97 (64.95%), Query Frame = -1
Query:  482 ASKRI*RELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK-EQWSPA 766
            AS+R+ +EL++++K    +     V E ++  WQ  I+ P + PY  G F + I+FP +YPFKPPK+ F+TK++HPNI+  G +CL ++  E W PA
Sbjct:    3 ASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPA 98          

HSP 2 Score: 39.6614 bits (91), Expect = 1.097e-21
Identity = 16/45 (35.56%), Postives = 28/45 (62.22%), Query Frame = -3
Query:  240 KVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKY 374
            +V+ S+ +L+ DP P+ PL  ++A  Y  D+ K+   A  +T+KY
Sbjct:  103 QVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKY 147          
BLAST of CN186026 vs. ExPASy Swiss-Prot
Match: UB2L3_PONAB (Ubiquitin-conjugating enzyme E2 L3 OS=Pongo abelii GN=UBE2L3 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.428e-21
Identity = 40/97 (41.24%), Postives = 63/97 (64.95%), Query Frame = -1
Query:  482 ASKRI*RELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK-EQWSPA 766
            AS+R+ +EL++++K    +     V E ++  WQ  I+ P + PY  G F + I+FP +YPFKPPK+ F+TK++HPNI+  G +CL ++  E W PA
Sbjct:    3 ASRRLMKELEEIRKCGMKNFRNIRVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPA 98          

HSP 2 Score: 39.6614 bits (91), Expect = 1.428e-21
Identity = 16/45 (35.56%), Postives = 28/45 (62.22%), Query Frame = -3
Query:  240 KVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKY 374
            +V+ S+ +L+ DP P+ PL  ++A  Y  D+ K+   A  +T+KY
Sbjct:  103 QVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKY 147          
BLAST of CN186026 vs. ExPASy Swiss-Prot
Match: UBC2_CANGA (Ubiquitin-conjugating enzyme E2 2 OS=Candida glabrata GN=UBC2 PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.641e-21
Identity = 42/99 (42.42%), Postives = 67/99 (67.68%), Query Frame = -1
Query:  470 ASKRI*RELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS 766
            A +R+ R+ K +++D P   SA P+ +++  W A I+GP+D+PY  G F + + F  DYP KPP V F +++FHPN+ +NG ICLDIL+ +W+P   ++
Sbjct:    5 ARRRLMRDFKRMKEDSPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEDYPNKPPHVKFLSEMFHPNVYANGEICLDILQNRWTPTYDVA 103          
BLAST of CN186026 vs. ExPASy Swiss-Prot
Match: UB2SB_XENLA (Ubiquitin-conjugating enzyme E2 S-B OS=Xenopus laevis GN=ube2s-B PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.386e-21
Identity = 40/96 (41.67%), Postives = 58/96 (60.42%), Query Frame = -1
Query:  473 KRI*RELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTI 760
            +R+ +E+  L  DPP      P  ED+   Q  I GP  +PYAGG+F + +    D+P  PPK  F TK+FHPN+++NG IC+++LK+ W   L I
Sbjct:   14 RRVYKEVSTLTSDPPEGIKIIPNEEDITDVQVNIEGPEGTPYAGGMFRMKLILGKDFPAAPPKGYFLTKIFHPNVSNNGEICVNVLKKDWKAELGI 109          

HSP 2 Score: 33.8834 bits (76), Expect = 2.386e-21
Identity = 22/60 (36.67%), Postives = 28/60 (46.67%), Query Frame = -3
Query:  216 KCIFGSCKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYAMG*RLLG 395
            K   G   VLL+I  LL  PNP+  L  E   +   +  +Y S AR  T  +A G  L G
Sbjct:  104 KAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYASRARLMTDIHAQGTSLRG 163          
BLAST of CN186026 vs. ExPASy Swiss-Prot
Match: UBE2S_XENTR (Ubiquitin-conjugating enzyme E2 S OS=Xenopus tropicalis GN=ube2s PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.386e-21
Identity = 39/96 (40.62%), Postives = 58/96 (60.42%), Query Frame = -1
Query:  473 KRI*RELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTI 760
            +++ +E+  L  DPP      P  ED+   Q  I GP  +PYAGG+F + +    D+P  PPK  F TK+FHPN+++NG IC+++LK+ W   L I
Sbjct:   14 RQVYKEVSTLTSDPPEGIKIIPNEEDITDVQVNIEGPEGTPYAGGIFRMKLILGKDFPAAPPKGYFLTKIFHPNVSTNGEICVNVLKKDWKAELGI 109          

HSP 2 Score: 34.6538 bits (78), Expect = 2.386e-21
Identity = 22/60 (36.67%), Postives = 29/60 (48.33%), Query Frame = -3
Query:  216 KCIFGSCKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYAMG*RLLG 395
            K   G   VLL+I  LL  PNP+  L  E   +   +  +Y S AR  T+ +A G  L G
Sbjct:  104 KAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYASRARLMTEIHAQGSSLRG 163          
BLAST of CN186026 vs. ExPASy Swiss-Prot
Match: UBC7_YEAST (Ubiquitin-conjugating enzyme E2-18 kDa OS=Saccharomyces cerevisiae GN=UBC7 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 2.408e-21
Identity = 48/114 (42.11%), Postives = 64/114 (56.14%), Query Frame = -1
Query:  467 ASKRI*RELKDLQKDPPTSCSAGPVAED-MFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISK 766
            A KR+ +EL+ L KD P    AGP +E+ +F W   I GP D+PYA GVF   + FP DYP  PPK+ F   + HPNI  NG +C+ IL             +E+WSP  ++ K
Sbjct:    5 AQKRLLKELQQLIKDSPPGIVAGPKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSILHPNIYPNGEVCISILHSPGDDPNMYELAEERWSPVQSVEK 118          

HSP 2 Score: 25.0238 bits (53), Expect = 2.408e-21
Identity = 9/35 (25.71%), Postives = 23/35 (65.71%), Query Frame = -3
Query:  270 KVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYE 374
            K+LLS+ S+L++PN +     +   +++ ++ ++E
Sbjct:  118 KILLSVMSMLSEPNIESGANIDACILWRDNRPEFE 152          
BLAST of CN186026 vs. ExPASy Swiss-Prot
Match: UB2G2_BOVIN (Ubiquitin-conjugating enzyme E2 G2 OS=Bos taurus GN=UBE2G2 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 4.075e-21
Identity = 46/114 (40.35%), Postives = 63/114 (55.26%), Query Frame = -1
Query:  467 ASKRI*RELKDLQKDPPTSCSAGPVAED-MFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISK 766
            A KR+  E K L  +PP    AGP+ E+  F W+A IMGP D+ +  GVF   + FP DYP  PPK+ F  ++FHPNI  +G +C+ IL              E+WSP  ++ K
Sbjct:    5 ALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEK 118          

HSP 2 Score: 32.3426 bits (72), Expect = 4.075e-21
Identity = 13/44 (29.55%), Postives = 26/44 (59.09%), Query Frame = -3
Query:  243 KVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQK 374
            K+LLS+ S+L +PN +     + + M++ D+ ++   A+   QK
Sbjct:  118 KILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKVAKQIVQK 161          
BLAST of CN186026 vs. ExPASy Swiss-Prot
Match: UBC2_YEAST (Ubiquitin-conjugating enzyme E2 2 OS=Saccharomyces cerevisiae GN=RAD6 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.776e-21
Identity = 41/99 (41.41%), Postives = 67/99 (67.68%), Query Frame = -1
Query:  470 ASKRI*RELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS 766
            A +R+ R+ K +++D P   SA P+ +++  W A I+GP+D+PY  G F + + F  +YP KPP V F +++FHPN+ +NG ICLDIL+ +W+P   ++
Sbjct:    5 ARRRLMRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYANGEICLDILQNRWTPTYDVA 103          
BLAST of CN186026 vs. ExPASy Swiss-Prot
Match: UBC2_KLULA (Ubiquitin-conjugating enzyme E2 2 OS=Kluyveromyces lactis GN=UBC2 PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.776e-21
Identity = 41/99 (41.41%), Postives = 67/99 (67.68%), Query Frame = -1
Query:  470 ASKRI*RELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS 766
            A +R+ R+ K +++D P   SA P+ +++  W A I+GP+D+PY  G F + + F  +YP KPP V F +++FHPN+ +NG ICLDIL+ +W+P   ++
Sbjct:    5 ARRRLMRDFKRMKEDSPPGVSASPLPDNVMIWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYANGEICLDILQNRWTPTYDVA 103          
BLAST of CN186026 vs. ExPASy Swiss-Prot
Match: UBC2_ASHGO (Ubiquitin-conjugating enzyme E2 2 OS=Ashbya gossypii GN=UBC2 PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.776e-21
Identity = 41/99 (41.41%), Postives = 67/99 (67.68%), Query Frame = -1
Query:  470 ASKRI*RELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS 766
            A +R+ R+ K +++D P   SA P+ +++  W A I+GP+D+PY  G F + + F  +YP KPP V F +++FHPN+ +NG ICLDIL+ +W+P   ++
Sbjct:    5 ARRRLMRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYANGEICLDILQNRWTPTYDVA 103          
The following BLAST results are available for this feature:
BLAST of CN186026 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 245
Match NameE-valueIdentityDescription
UB2L3_BOVIN1.097e-2141.24Ubiquitin-conjugating enzyme E2 L3 OS=Bos taurus G... [more]
UB2L3_PONAB1.428e-2141.24Ubiquitin-conjugating enzyme E2 L3 OS=Pongo abelii... [more]
UBC2_CANGA1.641e-2142.42Ubiquitin-conjugating enzyme E2 2 OS=Candida glabr... [more]
UB2SB_XENLA2.386e-2141.67Ubiquitin-conjugating enzyme E2 S-B OS=Xenopus lae... [more]
UBE2S_XENTR2.386e-2140.63Ubiquitin-conjugating enzyme E2 S OS=Xenopus tropi... [more]
UBC7_YEAST2.408e-2142.11Ubiquitin-conjugating enzyme E2-18 kDa OS=Saccharo... [more]
UB2G2_BOVIN4.075e-2140.35Ubiquitin-conjugating enzyme E2 G2 OS=Bos taurus G... [more]
UBC2_YEAST4.776e-2141.41Ubiquitin-conjugating enzyme E2 2 OS=Saccharomyces... [more]
UBC2_KLULA4.776e-2141.41Ubiquitin-conjugating enzyme E2 2 OS=Kluyveromyces... [more]
UBC2_ASHGO4.776e-2141.41Ubiquitin-conjugating enzyme E2 2 OS=Ashbya gossyp... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002D24_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002D24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186026 ID=CN186026; Name=CN186026; organism=Citrus sinensis; type=EST; length=775bp
TTTTTTTTTTTTTTTTTACTTAAGACCATTAACTACGTTCCATCGAAGAA
GCTTCAAACACAAACATTCAACATTAACATAAAAACGTCCCGCCCTTGCA
ACTCCTCCCAACACCATTCTAAAACACCAACGTCTGCCCTCCCCAAAGCA
AGTTAAAGAAAATAGATAGACAACACACACAACATATTTCAATAAATGCT
CCTTTTTCTGCAATATCCTAACAACCTTCATCCCATGGCATACTTCTGTG
TCCAGCTCCTGGCCGTGGATTCATATTTGGCCTTGTCGGACTTGTACATG
TGGGCAATCTCCGGTACAAGAGGGTCGTCGGGATTTGGATCAGTAAGCAA
GGAGCAGATAGAGAGCAGGACTTTGCAAGATCCAAAGATGCACTTGGGAG
TACAACTTTATGATCCCAGGGTCAGTTTTACCTGGCTGTGCAAGACCAGA
GAGTTGTACGCCACTACTTTGAAATGGTAAGCGCTGGACTCCACTGTTCT
TTAAGGATATCAAGACAGATGCTTCCATTGCTGTTGATGTTCGGGTGGAA
GACCTTGGTCCTAAAAGCAACCTTTGGGGGCTTGAAAGGATAATCAGGAG
GAAAATGAATGGTAACTAAAAATACACCTCCTGCATATGGGCTATCAGAA
GGGCCCATAATTGTTGCTTGCCAGTGGAACATGTCTTCAGCCACAGGGCC
AGCGCTGCAAGACGTGGGAGGATCCTTCTGCAAATCCTTGAGTTCCCTTC
AAATACGCTTTGAAGCCATGACTCT
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