CN186026
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186026 vs. ExPASy Swiss-Prot
Match: UBC6_KLULA (Ubiquitin-conjugating enzyme E2 6 OS=Kluyveromyces lactis GN=UBC6 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.480e-11 Identity = 34/103 (33.01%), Postives = 53/103 (51.46%), Query Frame = -1 Query: 473 VMASKRI*RELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICL---DILKEQWSPALTI 772 + A+KR+ +E K++ +PP A P +++ W I GP +PY G + T+ FP DYPF PP + T + N +CL D E W+PA ++ Sbjct: 4 IQANKRLTKEYKNIVNNPPPFIIAAPHEDNILEWHYVITGPPSTPYENGQYHGTLTFPSDYPFNPPAIRMITP--NGRFKENTRLCLSMSDYHPEAWNPAWSV 104
BLAST of CN186026 vs. ExPASy Swiss-Prot
Match: UBE2W_DANRE (Probable ubiquitin-conjugating enzyme E2 W OS=Danio rerio GN=ube2w PE=2 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 5.851e-11 Identity = 38/100 (38.00%), Postives = 52/100 (52.00%), Query Frame = -1 Query: 473 KRI*RELKDLQKDPPTSCSAGP--VAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVF--HPNINSNGSICLDILKEQWSPALTI 760 KR+ +EL LQ DPP + V + W + G + Y G F + F YPF+ P+V F + HP++ SNG ICL IL E WSPAL++ Sbjct: 6 KRLQKELLALQNDPPAGMTLNERSVQNTITEWFIDMEGAQGTVYEGEKFQLLFKFSSRYPFESPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSV 105
BLAST of CN186026 vs. ExPASy Swiss-Prot
Match: UBCX_PICAN (Ubiquitin-conjugating enzyme E2-21 kDa OS=Pichia angusta GN=PEX4 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.851e-11 Identity = 34/98 (34.69%), Postives = 49/98 (50.00%), Query Frame = -1 Query: 473 PVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRT----------------------KVFHPNIN-SNGSICLDILKEQWSPALTI 697 P+ + +F W A I GP SP+ ++ + I P +YP PPK+ F K+ HPN+N G ICLDIL+++WSPA T+ Sbjct: 36 PLEDGLFRWSAVIRGPDQSPFEDALWKLEIDIPTNYPLDPPKIKFVVFGEEKIRQLQRKTSSGARKVCYKMPHPNVNFKTGEICLDILQQKWSPAWTL 133
BLAST of CN186026 vs. ExPASy Swiss-Prot
Match: UBC12_YEAST (NEDD8-conjugating enzyme UBC12 OS=Saccharomyces cerevisiae GN=UBC12 PE=1 SV=1) HSP 1 Score: 63.5438 bits (153), Expect = 7.176e-11 Identity = 28/63 (44.44%), Postives = 39/63 (61.90%), Query Frame = -1 Query: 473 IMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTI 661 I+ P + Y G + F YP +PPKV K+FHPNI+ G++CL+IL+E WSPAL + Sbjct: 67 IVRPDEGYYNYGSINFNLDFNEVYPIEPPKVVCLKKIFHPNIDLKGNVCLNILREDWSPALDL 129 HSP 2 Score: 24.2534 bits (51), Expect = 7.176e-11 Identity = 9/38 (23.68%), Postives = 19/38 (50.00%), Query Frame = -3 Query: 258 VLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTAR 371 ++ + L +PNP+DPL + A + + ++ R Sbjct: 132 IITGLLFLFLEPNPNDPLNKDAAKLLCEGEKEFAEAVR 169
BLAST of CN186026 vs. ExPASy Swiss-Prot
Match: UBE2W_MOUSE (Probable ubiquitin-conjugating enzyme E2 W OS=Mus musculus GN=Ube2w PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.981e-11 Identity = 38/100 (38.00%), Postives = 51/100 (51.00%), Query Frame = -1 Query: 473 KRI*RELKDLQKDPPTSCSAGP--VAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTK--VFHPNINSNGSICLDILKEQWSPALTI 760 KR+ +EL LQ DPP + V + W + G + Y G F + F YPF P+V F + HP++ SNG ICL IL E WSPAL++ Sbjct: 6 KRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPIHPHVYSNGHICLSILTEDWSPALSV 105 The following BLAST results are available for this feature:
BLAST of CN186026 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 245
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186026 ID=CN186026; Name=CN186026; organism=Citrus sinensis; type=EST; length=775bpback to top |