DC900131

Overview
NameDC900131
Unique NameDC900131
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1096
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK2_PROMP (Chaperone protein dnaK2 OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=dnaK2 PE=2 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 2.332e-76
Identity = 138/218 (63.30%), Postives = 179/218 (82.11%), Query Frame = 1
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYSI*EELG 654
            +DE ++VGG TR+P VQE+V  + GK P++ VNPDE VA+GAAIQGG+L  +VK++LLLDVTPLSLG+ETLGG+ T++I RNTT+PTKKS+ +STA D QT V I VLQGEREMASDNKSLG F L GIP APRG+PQIEVTFDIDANGI++V+AKDK +GKEQ I+I  +  LS++E++KMVK+AE +A  D E++  ID++NQA+T +Y   ++LG
Sbjct:  328 IDEIVMVGGSTRMPAVQELVKRVTGKDPNQTVNPDEVVAVGAAIQGGVLAGEVKDILLLDVTPLSLGVETLGGVMTKMITRNTTVPTKKSETYSTAVDGQTNVEIHVLQGEREMASDNKSLGTFRLDGIPSAPRGVPQIEVTFDIDANGILSVTAKDKGSGKEQSISITGASTLSDNEVDKMVKDAESNASVDKEKREKIDLKNQAETLVYQTEKQLG 545          
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_MYCUA (Chaperone protein dnaK OS=Mycobacterium ulcerans (strain Agy99) GN=dnaK PE=2 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 2.609e-76
Identity = 136/212 (64.15%), Postives = 171/212 (80.66%), Query Frame = 1
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFG-KSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIY 633
            +D  +LVGG TR+P V E+V E+ G K P+KGVNPDE VA+GAA+Q G+L+ +VK++LLLDVTPLSLGIET GG+ T+LI RNTTIPTK+S+ F+TA DNQ  V I+V QGERE+A+ NK LG FEL GIPPAPRG+ QIEVTFDIDANGIV V+AKDK TGKE  I I+   GLS+DEI++M+K+AE HA  D++R+   D+RNQA+T +Y
Sbjct:  307 IDHVVLVGGSTRMPAVTELVKELTGGKEPNKGVNPDEVVAVGAALQAGVLKGEVKDVLLLDVTPLSLGIETKGGVMTKLIERNTTIPTKRSETFTTADDNQPSVQIQVYQGEREIAAHNKLLGSFELTGIPPAPRGVSQIEVTFDIDANGIVHVTAKDKGTGKENTIRIQEGSGLSKDEIDRMIKDAEAHAAEDHKRREEADVRNQAETLVY 518          

HSP 2 Score: 31.187 bits (69), Expect = 2.609e-76
Identity = 16/59 (27.12%), Postives = 31/59 (52.54%), Query Frame = 2
Query:  641 EKSLGEYRE-----KIPSEVAKEIEDAVADLRKAMGADNVDDIKSKLDAANKAVSKIGQ 802
            EK + E RE     K+P +   +++ AVA+ + A+   ++  IKS ++   +    +GQ
Sbjct:  521 EKFVKEQREAEGGSKVPEDTLNKVDAAVAEAKSALAGTDIAAIKSAMEKLGQESQALGQ 579          
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_SHISS (Chaperone protein dnaK OS=Shigella sonnei (strain Ss046) GN=dnaK PE=2 SV=1)

HSP 1 Score: 285.804 bits (730), Expect = 3.045e-76
Identity = 142/212 (66.98%), Postives = 177/212 (83.49%), Query Frame = 1
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYS 636
            +D+ +LVGG TR+P VQ+ V+E FGK P K VNPDEAVA+GAA+QGG+L  DVK++LLLDVTPLSLGIET+GG+ T LI +NTTIPTK SQVFSTA DNQ+ V I VLQGER+ A+DNKSLG+F L GI PAPRGMPQIEVTFDIDA+GI+ VSAKDK +GKEQ+ITI++S GL+EDEI+KMV++AE +A+ D + + L+  RNQ D  ++S
Sbjct:  334 IDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVKDVLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLNEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHS 545          
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_SHIFL (Chaperone protein dnaK OS=Shigella flexneri GN=dnaK PE=2 SV=1)

HSP 1 Score: 285.804 bits (730), Expect = 3.045e-76
Identity = 142/212 (66.98%), Postives = 177/212 (83.49%), Query Frame = 1
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYS 636
            +D+ +LVGG TR+P VQ+ V+E FGK P K VNPDEAVA+GAA+QGG+L  DVK++LLLDVTPLSLGIET+GG+ T LI +NTTIPTK SQVFSTA DNQ+ V I VLQGER+ A+DNKSLG+F L GI PAPRGMPQIEVTFDIDA+GI+ VSAKDK +GKEQ+ITI++S GL+EDEI+KMV++AE +A+ D + + L+  RNQ D  ++S
Sbjct:  334 IDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVKDVLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLNEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHS 545          
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_SHIF8 (Chaperone protein dnaK OS=Shigella flexneri serotype 5b (strain 8401) GN=dnaK PE=2 SV=1)

HSP 1 Score: 285.804 bits (730), Expect = 3.045e-76
Identity = 142/212 (66.98%), Postives = 177/212 (83.49%), Query Frame = 1
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYS 636
            +D+ +LVGG TR+P VQ+ V+E FGK P K VNPDEAVA+GAA+QGG+L  DVK++LLLDVTPLSLGIET+GG+ T LI +NTTIPTK SQVFSTA DNQ+ V I VLQGER+ A+DNKSLG+F L GI PAPRGMPQIEVTFDIDA+GI+ VSAKDK +GKEQ+ITI++S GL+EDEI+KMV++AE +A+ D + + L+  RNQ D  ++S
Sbjct:  334 IDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVKDVLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLNEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHS 545          
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_SHIDS (Chaperone protein dnaK OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=dnaK PE=2 SV=1)

HSP 1 Score: 285.804 bits (730), Expect = 3.045e-76
Identity = 142/212 (66.98%), Postives = 177/212 (83.49%), Query Frame = 1
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYS 636
            +D+ +LVGG TR+P VQ+ V+E FGK P K VNPDEAVA+GAA+QGG+L  DVK++LLLDVTPLSLGIET+GG+ T LI +NTTIPTK SQVFSTA DNQ+ V I VLQGER+ A+DNKSLG+F L GI PAPRGMPQIEVTFDIDA+GI+ VSAKDK +GKEQ+ITI++S GL+EDEI+KMV++AE +A+ D + + L+  RNQ D  ++S
Sbjct:  334 IDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVKDVLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLNEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHS 545          
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_SHIBS (Chaperone protein dnaK OS=Shigella boydii serotype 4 (strain Sb227) GN=dnaK PE=2 SV=1)

HSP 1 Score: 285.804 bits (730), Expect = 3.045e-76
Identity = 142/212 (66.98%), Postives = 177/212 (83.49%), Query Frame = 1
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYS 636
            +D+ +LVGG TR+P VQ+ V+E FGK P K VNPDEAVA+GAA+QGG+L  DVK++LLLDVTPLSLGIET+GG+ T LI +NTTIPTK SQVFSTA DNQ+ V I VLQGER+ A+DNKSLG+F L GI PAPRGMPQIEVTFDIDA+GI+ VSAKDK +GKEQ+ITI++S GL+EDEI+KMV++AE +A+ D + + L+  RNQ D  ++S
Sbjct:  334 IDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVKDVLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLNEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHS 545          
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_RALSO (Chaperone protein dnaK OS=Ralstonia solanacearum GN=dnaK PE=2 SV=2)

HSP 1 Score: 285.804 bits (730), Expect = 3.045e-76
Identity = 146/218 (66.97%), Postives = 174/218 (79.82%), Query Frame = 1
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYSI*EELG 654
            + + +LVGGMTR+PKVQE V E FGK   K VNPDEAVA+GAAIQG +L  D K++LLLDVTPLSLGIETLGG+ T++I +NTTIPTK SQ FSTA DNQ  V IKV QGEREMAS NK LGEF L GIPPAPRG PQIEV+FDIDANGI+ V AKDKATGKE +ITI++S GLSE EIE+MVK+AE +A+ D + + L+D RNQ +  ++S  + LG
Sbjct:  335 IHDVILVGGMTRMPKVQEKVKEFFGKEARKDVNPDEAVAVGAAIQGQVLGGDRKDVLLLDVTPLSLGIETLGGVMTKMIGKNTTIPTKFSQTFSTADDNQPAVTIKVYQGEREMASGNKMLGEFNLEGIPPAPRGTPQIEVSFDIDANGILHVGAKDKATGKENKITIKASSGLSEAEIERMVKDAEANAEEDKKLRELVDSRNQGEALVHSTRKALG 552          
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_MARMS (Chaperone protein dnaK OS=Marinomonas sp. (strain MWYL1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 285.804 bits (730), Expect = 3.045e-76
Identity = 141/212 (66.51%), Postives = 173/212 (81.60%), Query Frame = 1
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYS 636
            +DE +LVGG TR+P VQ  V+E FGK P K VNPDEAVA+GA+IQG +L  DVK++LLLDVTPLSLGIET+GG+ T LI +NTTIPTKKSQ FSTA DNQ  V I  LQGER+ AS NKSLG F+L  IPPAPRG+PQIEV+FDIDANGI++VSAKDKATGKEQ I I+SS GLS++E+EKMV++AE +A+ D + + L+ +RN AD  I++
Sbjct:  334 IDEVILVGGQTRMPLVQAKVTEFFGKEPRKDVNPDEAVAIGASIQGAVLSGDVKDVLLLDVTPLSLGIETMGGVMTTLIEKNTTIPTKKSQTFSTAEDNQNAVTIHALQGERKQASQNKSLGRFDLADIPPAPRGVPQIEVSFDIDANGILSVSAKDKATGKEQSIVIKSSSGLSDEEVEKMVQDAEANAEEDRKFEELVQVRNTADGMIHA 545          
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_KLEP7 (Chaperone protein dnaK OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=dnaK PE=2 SV=1)

HSP 1 Score: 285.804 bits (730), Expect = 3.045e-76
Identity = 142/212 (66.98%), Postives = 178/212 (83.96%), Query Frame = 1
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYS 636
            +++ +LVGG TR+P VQ+ V+E FGK P K VNPDEAVA+GAA+QGG+L  DVK++LLLDVTPLSLGIET+GG+ T LI++NTTIPTK SQVFSTA DNQ+ V I VLQGER+ ASDNKSLG+F L GI PAPRGMPQIEVTFDIDA+GI+ VSAKDK +GKEQ+ITI++S GL+E+EI+KMV+EAE +A+ D + + L+  RNQ D  ++S
Sbjct:  334 INDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVKDVLLLDVTPLSLGIETMGGVMTALISKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRASDNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLNEEEIQKMVREAEANAESDRKFEELVQTRNQGDHLLHS 545          
The following BLAST results are available for this feature:
BLAST of DC900131 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK2_PROMP2.332e-7663.30Chaperone protein dnaK2 OS=Prochlorococcus marinus... [more]
DNAK_MYCUA2.609e-7664.15Chaperone protein dnaK OS=Mycobacterium ulcerans (... [more]
DNAK_SHISS3.045e-7666.98Chaperone protein dnaK OS=Shigella sonnei (strain ... [more]
DNAK_SHIFL3.045e-7666.98Chaperone protein dnaK OS=Shigella flexneri GN=dna... [more]
DNAK_SHIF83.045e-7666.98Chaperone protein dnaK OS=Shigella flexneri seroty... [more]
DNAK_SHIDS3.045e-7666.98Chaperone protein dnaK OS=Shigella dysenteriae ser... [more]
DNAK_SHIBS3.045e-7666.98Chaperone protein dnaK OS=Shigella boydii serotype... [more]
DNAK_RALSO3.045e-7666.97Chaperone protein dnaK OS=Ralstonia solanacearum G... [more]
DNAK_MARMS3.045e-7666.51Chaperone protein dnaK OS=Marinomonas sp. (strain ... [more]
DNAK_KLEP73.045e-7666.98Chaperone protein dnaK OS=Klebsiella pneumoniae su... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionDC900131 VSS Citrus sinensis cDNA clone VS27V48 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900131 ID=DC900131; Name=DC900131; organism=Citrus sinensis; type=EST; length=1096bp
GTGGATGAGCNGCTTTTGGTTGGAGGAATGACCCGTGTGCCAAAGGTGCA
GGAAGTGGTCTCAGAAATCTTTGGTAAGAGTCCAAGCAAGGGAGTAAATC
CTGATGAGGCAGTTGCCCTTGGTGCTGCTATTCAAGGTGGTATTCTTCGT
GNNGACGTCAAAGAGTTGCTTCTCTTGGATGTTACACCTCTGTCACTGGG
TATTGAGACACTAGGTGGTATCTTCACCAGGTTGATCAATCGCAACACAA
CTATTCCAACAAAGAAGAGTCAGGTCTTCTCAACAGCAGCTGATAACCAG
ACTCAGGTGGGGATTAAGGTGCTTCAAGGTGAGCGCGAAATGGCATCTGA
CAACAAGTCCCTAGGAGAGTTTGAACTTGTGGGCATTCCACCAGCTCCTA
GAGGCATGCCTCAGATTGAGGTCACATTTGACATTGATGCCAATGGTATT
GTCACTGTTTCTGCAAAGGACAAGGCCACTGGCAAGGAACAGCAAATTAC
CATCCGCTCATCTGGAGGTCTATCAGAGGATGAAATTGAGAAGATGGTTA
AGGAAGCAGAATTGCATGCCCAGAGGGATAATGAAAGAAAAGCTCTGATT
GATATCAGAAACCAGGCGGATACCACCATCTACAGCATTTGAGAAGAGCT
TGGGTGAGTACAGAGAAAAGATTCCCAGTGAGGTTGCAAAAGAGATTGAG
GATGCTGTTGCAGATTTGAGAAAGGCCATGGGAGCTGACAATGTTGATGA
TATCAAGTCCAAGCTTGATGCAGCTAACAAAGCTGTCTCTAAGATTGGAC
AACACATGGCTGGTGGTTCTGGTGGTGGTGCTGGTTCTGGAGGTTCCCAG
GGTGGTGAACAGACTCCCGAGGCTGAGTATGAGGAGGTGAAAAAGTGAGC
ACAGAGGTAGTAAATTTCGTTCGTTGATGCTTCAAAAGGAGTCGGACATT
CANGAATGAGTCTTGTTTTGATTTGTAGTTTTAGGATATATGGCGGTTTT
GTATCTAAATTTTTATTTATTCAAGTTGTTAGGATAACGTTTTACTTTAT
TTTGAGAAACTGCACGAGCAAGTTAAAACCCTTTCCGGTGTATGGT
back to top