DC900131

Overview
NameDC900131
Unique NameDC900131
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1096
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_CHLT3 (Chaperone protein dnaK OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=dnaK PE=2 SV=1)

HSP 1 Score: 291.967 bits (746), Expect = 2.852e-81
Identity = 143/212 (67.45%), Postives = 172/212 (81.13%), Query Frame = 1
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYS 636
            +DE +LVGG TR+PKVQ++V E FGK P++ VNPDE VA+GAAIQGG+L+ DV ++LLLDVTPLSLGIETLGG+ T+LI  NTTIPTKK + FSTAADNQT V I +LQGER M++DNK+LG F L GIPPAPRG+PQIEV FDIDANGI+ VSAKDKATGKEQ + I +SG LSE EIEKM K+A  HA  D ++K  +D +N AD  I+S
Sbjct:  327 IDEVVLVGGSTRIPKVQQLVKEFFGKEPNRSVNPDEVVAVGAAIQGGVLKGDVTDVLLLDVTPLSLGIETLGGVMTKLIEANTTIPTKKQETFSTAADNQTSVEIHILQGERPMSTDNKTLGRFHLDGIPPAPRGVPQIEVAFDIDANGILHVSAKDKATGKEQSVRIEASGKLSETEIEKMKKDASSHADEDKKKKEEVDTKNTADALIFS 538          

HSP 2 Score: 31.9574 bits (71), Expect = 2.852e-81
Identity = 19/56 (33.93%), Postives = 31/56 (55.36%), Query Frame = 2
Query:  641 EKSLGEYREKIPSEVAKEIEDAVADLRKAMGADNVDDIKSKLDAA----NKAVSKI 796
            EK + E  +K+P+E   +I+ A+  L++A    N   IK  +DA     N+A SK+
Sbjct:  540 EKQINEIGDKLPAENLSKIQAALDRLKEAHKTGNTATIKPAMDALTKEWNEAASKM 595          
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_CAMJD (Chaperone protein dnaK OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=dnaK PE=2 SV=1)

HSP 1 Score: 288.115 bits (736), Expect = 3.720e-81
Identity = 143/217 (65.90%), Postives = 172/217 (79.26%), Query Frame = 1
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYSI*EEL 651
            + E ++VGG TRVP VQE V + F K  +K VNPDE VA+GAAIQG +++ DVK++LLLDVTPLSLGIETLGG+ T++I + TTIPTKK QVFSTA DNQ+ V I VLQGERE + DNKSLG F L GIPPAPRGMPQIEVTFDIDANGI+TVSAKDKATGK Q+I I  S GLSE+EI  MVK+AELH + D +RK  +D+RN AD+  + + + L
Sbjct:  328 IKEVVMVGGSTRVPLVQEEVKKTFNKDLNKSVNPDEVVAIGAAIQGAVIKGDVKDVLLLDVTPLSLGIETLGGVMTKIIEKGTTIPTKKEQVFSTAEDNQSAVTINVLQGEREFSRDNKSLGNFNLEGIPPAPRGMPQIEVTFDIDANGILTVSAKDKATGKAQEIKITGSSGLSEEEINNMVKDAELHKEEDKKRKEAVDVRNAADSLAHQVEKSL 544          

HSP 2 Score: 35.4242 bits (80), Expect = 3.720e-81
Identity = 19/58 (32.76%), Postives = 35/58 (60.34%), Query Frame = 2
Query:  641 EKSLGEYREKIPSEVAKEIEDAVADLRKAMGADNV--DDIKSKLDAANKAVSKIGQHM 808
            EKSL E  EK+ +   + I+ A+ DLR+ +   N   ++I+SK+ A ++   K+ ++M
Sbjct:  541 EKSLSELGEKVATADKENIQKALDDLRETLKNQNASKEEIESKMKALSEVSHKLAENM 598          
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_LEPIN (Chaperone protein dnaK OS=Leptospira interrogans GN=dnaK PE=2 SV=1)

HSP 1 Score: 301.982 bits (772), Expect = 4.106e-81
Identity = 148/213 (69.48%), Postives = 179/213 (84.04%), Query Frame = 1
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYSI 639
            ++E +LVGG  R+P VQE+V ++FGK P+K VNPDE VA+GAAIQGG+L  +V ++LLLDVTPLSLGIETLGG+ T+LI RNTTIPTKKSQVFSTAADNQ+ V I VLQGEREMAS N++LG F+L+GIPPAPRG+PQIEVTFDIDANGIV VSAKD  TGKEQ+I I SS GLSEDEI+KMVK+AE HA  D  ++ +I+ +N+ DT  YS+
Sbjct:  330 INEVILVGGSIRIPAVQELVKQVFGKEPNKSVNPDEVVAIGAAIQGGVLAGEVSDVLLLDVTPLSLGIETLGGVMTKLIERNTTIPTKKSQVFSTAADNQSAVSIHVLQGEREMASANRTLGRFDLIGIPPAPRGVPQIEVTFDIDANGIVHVSAKDLGTGKEQKIRIESSSGLSEDEIQKMVKDAEAHAAADKAQREVIEAKNELDTLTYSL 542          
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_LEPIC (Chaperone protein dnaK OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=dnaK PE=2 SV=1)

HSP 1 Score: 301.982 bits (772), Expect = 4.106e-81
Identity = 148/213 (69.48%), Postives = 179/213 (84.04%), Query Frame = 1
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYSI 639
            ++E +LVGG  R+P VQE+V ++FGK P+K VNPDE VA+GAAIQGG+L  +V ++LLLDVTPLSLGIETLGG+ T+LI RNTTIPTKKSQVFSTAADNQ+ V I VLQGEREMAS N++LG F+L+GIPPAPRG+PQIEVTFDIDANGIV VSAKD  TGKEQ+I I SS GLSEDEI+KMVK+AE HA  D  ++ +I+ +N+ DT  YS+
Sbjct:  330 INEVILVGGSIRIPAVQELVKQVFGKEPNKSVNPDEVVAIGAAIQGGVLAGEVSDVLLLDVTPLSLGIETLGGVMTKLIERNTTIPTKKSQVFSTAADNQSAVSIHVLQGEREMASANRTLGRFDLIGIPPAPRGVPQIEVTFDIDANGIVHVSAKDLGTGKEQKIRIESSSGLSEDEIQKMVKDAEAHAAADKAQREVIEAKNELDTLTYSL 542          
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_LEPBL (Chaperone protein dnaK OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=dnaK PE=2 SV=1)

HSP 1 Score: 301.982 bits (772), Expect = 4.106e-81
Identity = 149/213 (69.95%), Postives = 179/213 (84.04%), Query Frame = 1
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYSI 639
            ++E +LVGG  R+P VQE+V +IFGK P+K VNPDE VA+GAAIQGG+L  +V ++LLLDVTPLSLGIETLGG+ T+LI RNTTIPTKKSQVFSTAADNQ+ V I VLQGEREMAS N++LG F+L+GIPPAPRG+PQIEVTFDIDANGIV VSAKD  TGKEQ+I I SS GLSEDEI+KMVK+AE HA  D  ++ +I+ +N+ DT  YS+
Sbjct:  330 INEVILVGGSIRIPAVQELVKQIFGKEPNKSVNPDEVVAVGAAIQGGVLAGEVSDVLLLDVTPLSLGIETLGGVMTKLIERNTTIPTKKSQVFSTAADNQSAVSIHVLQGEREMASANRTLGRFDLIGIPPAPRGVPQIEVTFDIDANGIVHVSAKDLGTGKEQKIRIESSSGLSEDEIQKMVKDAEAHAAADKAQREVIEAKNELDTLAYSL 542          
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_LEPBJ (Chaperone protein dnaK OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=dnaK PE=2 SV=1)

HSP 1 Score: 301.982 bits (772), Expect = 4.106e-81
Identity = 149/213 (69.95%), Postives = 179/213 (84.04%), Query Frame = 1
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYSI 639
            ++E +LVGG  R+P VQE+V +IFGK P+K VNPDE VA+GAAIQGG+L  +V ++LLLDVTPLSLGIETLGG+ T+LI RNTTIPTKKSQVFSTAADNQ+ V I VLQGEREMAS N++LG F+L+GIPPAPRG+PQIEVTFDIDANGIV VSAKD  TGKEQ+I I SS GLSEDEI+KMVK+AE HA  D  ++ +I+ +N+ DT  YS+
Sbjct:  330 INEVILVGGSIRIPAVQELVKQIFGKEPNKSVNPDEVVAVGAAIQGGVLAGEVSDVLLLDVTPLSLGIETLGGVMTKLIERNTTIPTKKSQVFSTAADNQSAVSIHVLQGEREMASANRTLGRFDLIGIPPAPRGVPQIEVTFDIDANGIVHVSAKDLGTGKEQKIRIESSSGLSEDEIQKMVKDAEAHAAADKAQREVIEAKNELDTLAYSL 542          
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_GEOUR (Chaperone protein dnaK OS=Geobacter uraniireducens (strain Rf4) GN=dnaK PE=2 SV=1)

HSP 1 Score: 301.982 bits (772), Expect = 4.106e-81
Identity = 149/212 (70.28%), Postives = 179/212 (84.43%), Query Frame = 1
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYS 636
            +DE +LVGGMTR+P VQ+ V +IFGK P++ VNPDE VA+GAAIQGG+LR DVK++LLLDVTPLSLGIETLGG+ TRLI +N TIP +KSQ+FSTAADNQ  V I VLQGEREM++DNK+LG FEL GIPPAPRG+PQIEVTFDIDANGIV VSAKD  TGKEQ I I +S GLS++EI+KMVK+AE H+  D +++ LI+ RNQAD+  YS
Sbjct:  329 IDEVILVGGMTRMPIVQKKVQDIFGKVPNRSVNPDEVVAIGAAIQGGVLRGDVKDVLLLDVTPLSLGIETLGGVMTRLIEKNATIPCRKSQIFSTAADNQPAVSIHVLQGEREMSTDNKTLGNFELSGIPPAPRGVPQIEVTFDIDANGIVHVSAKDLGTGKEQSIRITASSGLSKEEIDKMVKDAEAHSSEDKKKRELIEARNQADSLAYS 540          
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_NITEC (Chaperone protein dnaK OS=Nitrosomonas eutropha (strain C91) GN=dnaK PE=2 SV=1)

HSP 1 Score: 301.597 bits (771), Expect = 5.363e-81
Identity = 151/217 (69.59%), Postives = 180/217 (82.95%), Query Frame = 1
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYSI*EEL 651
            +D+ +LVGG TR+PKVQ+ V EIFGK P K VNPDEAVA+GAAIQGG+L+ DVK++LLLDVTPLSLGIETLGG+ T+LI +NTTIPTK  Q+FSTA D+QT V I VLQGEREMAS NKSLG+F L  IPPA RGMPQIEVTFDIDANGI+ VSAKDKATGKE +I I++S GLSEDEI+KMVK+AE HA+ D +   L++ RNQ D  I+S+ + L
Sbjct:  334 IDDVILVGGQTRMPKVQDKVKEIFGKEPRKDVNPDEAVAIGAAIQGGVLQGDVKDVLLLDVTPLSLGIETLGGVMTKLIQKNTTIPTKAQQIFSTAEDSQTAVTIHVLQGEREMASGNKSLGQFNLTDIPPAQRGMPQIEVTFDIDANGILHVSAKDKATGKENKIKIQASSGLSEDEIQKMVKDAETHAEEDKKALELVNSRNQCDAMIHSVKKSL 550          
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_DESVV (Chaperone protein dnaK OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=dnaK PE=2 SV=1)

HSP 1 Score: 301.597 bits (771), Expect = 5.363e-81
Identity = 152/211 (72.04%), Postives = 176/211 (83.41%), Query Frame = 1
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIY 633
            +DE +LVGGMTR+P VQ+ VSE FGK P++ VNPDE VA+GAAIQGGIL  DVK++LLLDVTPLSLGIETLGG+FTRLI RNTTIPT+KSQ F+TAADNQ  V I VLQGER MASDN +LG FEL GIPPA RG+PQIEV+FDIDANGIV V+AKD  TGKEQ I I +S GLSEDEI+++VKEAE HA  D +++ LI+ RNQAD  IY
Sbjct:  329 IDEVVLVGGMTRMPLVQKRVSEFFGKEPNRSVNPDEVVAMGAAIQGGILAGDVKDVLLLDVTPLSLGIETLGGVFTRLIERNTTIPTRKSQTFTTAADNQPSVSIHVLQGERPMASDNMTLGRFELTGIPPAMRGVPQIEVSFDIDANGIVNVAAKDLGTGKEQSIRITASSGLSEDEIQRLVKEAEAHADDDKKKQELIEARNQADGLIY 539          
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_DESVH (Chaperone protein dnaK OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=dnaK PE=2 SV=1)

HSP 1 Score: 301.597 bits (771), Expect = 5.363e-81
Identity = 152/211 (72.04%), Postives = 176/211 (83.41%), Query Frame = 1
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIY 633
            +DE +LVGGMTR+P VQ+ VSE FGK P++ VNPDE VA+GAAIQGGIL  DVK++LLLDVTPLSLGIETLGG+FTRLI RNTTIPT+KSQ F+TAADNQ  V I VLQGER MASDN +LG FEL GIPPA RG+PQIEV+FDIDANGIV V+AKD  TGKEQ I I +S GLSEDEI+++VKEAE HA  D +++ LI+ RNQAD  IY
Sbjct:  329 IDEVVLVGGMTRMPLVQKRVSEFFGKEPNRSVNPDEVVAMGAAIQGGILAGDVKDVLLLDVTPLSLGIETLGGVFTRLIERNTTIPTRKSQTFTTAADNQPSVSIHVLQGERPMASDNMTLGRFELTGIPPAMRGVPQIEVSFDIDANGIVNVAAKDLGTGKEQSIRITASSGLSEDEIQRLVKEAEAHADDDKKKQELIEARNQADGLIY 539          
The following BLAST results are available for this feature:
BLAST of DC900131 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_CHLT32.852e-8167.45Chaperone protein dnaK OS=Chloroherpeton thalassiu... [more]
DNAK_CAMJD3.720e-8165.90Chaperone protein dnaK OS=Campylobacter jejuni sub... [more]
DNAK_LEPIN4.106e-8169.48Chaperone protein dnaK OS=Leptospira interrogans G... [more]
DNAK_LEPIC4.106e-8169.48Chaperone protein dnaK OS=Leptospira interrogans s... [more]
DNAK_LEPBL4.106e-8169.95Chaperone protein dnaK OS=Leptospira borgpeterseni... [more]
DNAK_LEPBJ4.106e-8169.95Chaperone protein dnaK OS=Leptospira borgpeterseni... [more]
DNAK_GEOUR4.106e-8170.28Chaperone protein dnaK OS=Geobacter uraniireducens... [more]
DNAK_NITEC5.363e-8169.59Chaperone protein dnaK OS=Nitrosomonas eutropha (s... [more]
DNAK_DESVV5.363e-8172.04Chaperone protein dnaK OS=Desulfovibrio vulgaris s... [more]
DNAK_DESVH5.363e-8172.04Chaperone protein dnaK OS=Desulfovibrio vulgaris (... [more]

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Properties
Property NameValue
Genbank descriptionDC900131 VSS Citrus sinensis cDNA clone VS27V48 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900131 ID=DC900131; Name=DC900131; organism=Citrus sinensis; type=EST; length=1096bp
GTGGATGAGCNGCTTTTGGTTGGAGGAATGACCCGTGTGCCAAAGGTGCA
GGAAGTGGTCTCAGAAATCTTTGGTAAGAGTCCAAGCAAGGGAGTAAATC
CTGATGAGGCAGTTGCCCTTGGTGCTGCTATTCAAGGTGGTATTCTTCGT
GNNGACGTCAAAGAGTTGCTTCTCTTGGATGTTACACCTCTGTCACTGGG
TATTGAGACACTAGGTGGTATCTTCACCAGGTTGATCAATCGCAACACAA
CTATTCCAACAAAGAAGAGTCAGGTCTTCTCAACAGCAGCTGATAACCAG
ACTCAGGTGGGGATTAAGGTGCTTCAAGGTGAGCGCGAAATGGCATCTGA
CAACAAGTCCCTAGGAGAGTTTGAACTTGTGGGCATTCCACCAGCTCCTA
GAGGCATGCCTCAGATTGAGGTCACATTTGACATTGATGCCAATGGTATT
GTCACTGTTTCTGCAAAGGACAAGGCCACTGGCAAGGAACAGCAAATTAC
CATCCGCTCATCTGGAGGTCTATCAGAGGATGAAATTGAGAAGATGGTTA
AGGAAGCAGAATTGCATGCCCAGAGGGATAATGAAAGAAAAGCTCTGATT
GATATCAGAAACCAGGCGGATACCACCATCTACAGCATTTGAGAAGAGCT
TGGGTGAGTACAGAGAAAAGATTCCCAGTGAGGTTGCAAAAGAGATTGAG
GATGCTGTTGCAGATTTGAGAAAGGCCATGGGAGCTGACAATGTTGATGA
TATCAAGTCCAAGCTTGATGCAGCTAACAAAGCTGTCTCTAAGATTGGAC
AACACATGGCTGGTGGTTCTGGTGGTGGTGCTGGTTCTGGAGGTTCCCAG
GGTGGTGAACAGACTCCCGAGGCTGAGTATGAGGAGGTGAAAAAGTGAGC
ACAGAGGTAGTAAATTTCGTTCGTTGATGCTTCAAAAGGAGTCGGACATT
CANGAATGAGTCTTGTTTTGATTTGTAGTTTTAGGATATATGGCGGTTTT
GTATCTAAATTTTTATTTATTCAAGTTGTTAGGATAACGTTTTACTTTAT
TTTGAGAAACTGCACGAGCAAGTTAAAACCCTTTCCGGTGTATGGT
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