DC900131

Overview
NameDC900131
Unique NameDC900131
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1096
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_SYMTH (Chaperone protein dnaK OS=Symbiobacterium thermophilum GN=dnaK PE=2 SV=1)

HSP 1 Score: 286.96 bits (733), Expect = 1.367e-76
Identity = 142/212 (66.98%), Postives = 172/212 (81.13%), Query Frame = 1 
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYS 636
            +D+ LLVGG TR+P VQE V   FGK P KG+NPDE VA+GAAIQ  +++ DVK++LLLDVTPLSLGIETLGG+FT+LI RNTTIPT+KSQ+FSTAAD QTQV I VLQGEREMA+ NK+LG F L GIPPAPRG+P+IEVTFDID NGIV VSAKD  TGKEQ+ITI+S   +S++EIE+ +KEAE  A  D +R+   +IRN AD  +Y+
Sbjct:  305 IDKVLLVGGSTRIPAVQEAVRRFFGKEPYKGINPDEVVAMGAAIQAAVIKGDVKDVLLLDVTPLSLGIETLGGVFTKLIERNTTIPTRKSQIFSTAADGQTQVEIHVLQGEREMAAYNKTLGRFILDGIPPAPRGVPKIEVTFDIDVNGIVHVSAKDLGTGKEQKITIQSQTSMSKEEIERAIKEAEAMAAEDKKRREEAEIRNNADAAVYN 516
[Close]
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_RALEH (Chaperone protein dnaK OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=dnaK PE=2 SV=1)

HSP 1 Score: 286.96 bits (733), Expect = 1.367e-76
Identity = 145/212 (68.40%), Postives = 172/212 (81.13%), Query Frame = 1 
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYS 636
            +D+ +LVGGMTR+PKVQE V E FGK   K VNPDEAVA+GAAIQG +L  D  ++LLLDVTPLSLGIETLGG+ T++I +NTTIPTK +QVFSTA DNQ  V IKV QGEREMAS NK LGEF L GIPPA RG PQIEV+FDIDANGI+ V AKDKATGKE +ITI+++ GLSEDEI++MVK+AE +A+ D + + L D RNQAD  I+S
Sbjct:  335 IDDVILVGGMTRMPKVQEQVKEFFGKEARKDVNPDEAVAVGAAIQGSVLSGDRTDVLLLDVTPLSLGIETLGGVMTKMITKNTTIPTKHAQVFSTADDNQPAVTIKVFQGEREMASGNKLLGEFNLEGIPPAARGTPQIEVSFDIDANGILHVGAKDKATGKENRITIKANSGLSEDEIQRMVKDAEANAEEDKKARELADARNQADALIHS 546
[Close]
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_CLOK5 (Chaperone protein dnaK OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=dnaK PE=2 SV=1)

HSP 1 Score: 286.96 bits (733), Expect = 1.367e-76
Identity = 145/211 (68.72%), Postives = 170/211 (80.57%), Query Frame = 1 
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIY 633
            +++ +LVGG TR+P VQE V    GK PSKGVNPDE VA+GAAIQ G+L  DVK++LLLDVTPL+LGIETLGG+ T LI RNTTIPTKKSQVFSTAAD QT V I V+QGER+MA+DNK+LG F L GI PAPRG+PQIEVTFDIDANGIV VSAKDK TGKE  ITI +S  LS+DEI+K VKEAE   ++D +RK  I+I+N AD  +Y
Sbjct:  306 INKVILVGGSTRIPAVQEAVKSFTGKEPSKGVNPDECVAMGAAIQAGVLTGDVKDVLLLDVTPLTLGIETLGGVATPLIERNTTIPTKKSQVFSTAADGQTSVEIHVVQGERQMAADNKTLGRFTLSGIAPAPRGVPQIEVTFDIDANGIVNVSAKDKGTGKEANITITASTNLSDDEIDKAVKEAEKFEEQDKKRKESIEIKNNADQVVY 516
[Close]
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_CLOK1 (Chaperone protein dnaK OS=Clostridium kluyveri (strain NBRC 12016) GN=dnaK PE=2 SV=1)

HSP 1 Score: 286.96 bits (733), Expect = 1.367e-76
Identity = 145/211 (68.72%), Postives = 170/211 (80.57%), Query Frame = 1 
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIY 633
            +++ +LVGG TR+P VQE V    GK PSKGVNPDE VA+GAAIQ G+L  DVK++LLLDVTPL+LGIETLGG+ T LI RNTTIPTKKSQVFSTAAD QT V I V+QGER+MA+DNK+LG F L GI PAPRG+PQIEVTFDIDANGIV VSAKDK TGKE  ITI +S  LS+DEI+K VKEAE   ++D +RK  I+I+N AD  +Y
Sbjct:  306 INKVILVGGSTRIPAVQEAVKSFTGKEPSKGVNPDECVAMGAAIQAGVLTGDVKDVLLLDVTPLTLGIETLGGVATPLIERNTTIPTKKSQVFSTAADGQTSVEIHVVQGERQMAADNKTLGRFTLSGIAPAPRGVPQIEVTFDIDANGIVNVSAKDKGTGKEANITITASTNLSDDEIDKAVKEAEKFEEQDKKRKESIEIKNNADQVVY 516
[Close]
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_BURTA (Chaperone protein dnaK OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=dnaK PE=2 SV=1)

HSP 1 Score: 286.96 bits (733), Expect = 1.367e-76
Identity = 144/212 (67.92%), Postives = 173/212 (81.60%), Query Frame = 1 
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYS 636
            +D+ +LVGG TR+PKV E V E FGK P + VNPDEAVA+GAAIQG +L  D K++LLLDVTPLSLGIETLGG+ T++IN+NTTIPTK SQV+STA DNQ  V IKV QGEREMA+ NK LGEF L GIPPAPRG+PQIEVTFDIDANGI+ V AKDKATGKE +ITI+++ GLSE EIEKMVK+AE +A  D++ + L + RNQ D  ++S
Sbjct:  335 IDDVILVGGQTRMPKVMEKVKEFFGKDPRRDVNPDEAVAVGAAIQGQVLSGDRKDVLLLDVTPLSLGIETLGGVMTKMINKNTTIPTKHSQVYSTADDNQGAVTIKVFQGEREMAAGNKLLGEFNLEGIPPAPRGVPQIEVTFDIDANGILHVGAKDKATGKENKITIKANSGLSEAEIEKMVKDAEANAAEDHKLRELAESRNQGDALVHS 546
[Close]
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_BACCQ (Chaperone protein dnaK OS=Bacillus cereus (strain Q1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 286.96 bits (733), Expect = 1.367e-76
Identity = 141/211 (66.82%), Postives = 171/211 (81.04%), Query Frame = 1 
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIY 633
            +D  +LVGG TR+P VQE +    GK P KGVNPDE VALGAA+QGG+L  DV+ +LLLDVTPLSLGIET+GG+FT+LI RNTTIPT KSQVFSTAADNQ  V I VLQGER M++DNK+LG F+L  IPPAPRG+PQIEVTFDIDANGIV V AKD  T KEQ ITI+SS GLS++E+++MVKEAE +A  D +RK  +++RN+AD  ++
Sbjct:  304 LDRVILVGGSTRIPAVQEAIKRETGKEPYKGVNPDEVVALGAAVQGGVLTGDVEGVLLLDVTPLSLGIETMGGVFTKLIERNTTIPTSKSQVFSTAADNQPAVDIHVLQGERPMSADNKTLGRFQLTDIPPAPRGIPQIEVTFDIDANGIVNVRAKDLGTSKEQAITIQSSSGLSDEEVDRMVKEAEANADADQKRKEEVELRNEADQLVF 514
[Close]
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_BACC7 (Chaperone protein dnaK OS=Bacillus cereus (strain AH187) GN=dnaK PE=2 SV=1)

HSP 1 Score: 286.96 bits (733), Expect = 1.367e-76
Identity = 141/211 (66.82%), Postives = 171/211 (81.04%), Query Frame = 1 
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIY 633
            +D  +LVGG TR+P VQE +    GK P KGVNPDE VALGAA+QGG+L  DV+ +LLLDVTPLSLGIET+GG+FT+LI RNTTIPT KSQVFSTAADNQ  V I VLQGER M++DNK+LG F+L  IPPAPRG+PQIEVTFDIDANGIV V AKD  T KEQ ITI+SS GLS++E+++MVKEAE +A  D +RK  +++RN+AD  ++
Sbjct:  304 LDRVILVGGSTRIPAVQEAIKRETGKEPYKGVNPDEVVALGAAVQGGVLTGDVEGVLLLDVTPLSLGIETMGGVFTKLIERNTTIPTSKSQVFSTAADNQPAVDIHVLQGERPMSADNKTLGRFQLTDIPPAPRGIPQIEVTFDIDANGIVNVRAKDLGTSKEQAITIQSSSGLSDEEVDRMVKEAEANADADQKRKEEVELRNEADQLVF 514
[Close]
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_BACC1 (Chaperone protein dnaK OS=Bacillus cereus (strain ATCC 10987) GN=dnaK PE=2 SV=1)

HSP 1 Score: 286.96 bits (733), Expect = 1.367e-76
Identity = 141/211 (66.82%), Postives = 171/211 (81.04%), Query Frame = 1 
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIY 633
            +D  +LVGG TR+P VQE +    GK P KGVNPDE VALGAA+QGG+L  DV+ +LLLDVTPLSLGIET+GG+FT+LI RNTTIPT KSQVFSTAADNQ  V I VLQGER M++DNK+LG F+L  IPPAPRG+PQIEVTFDIDANGIV V AKD  T KEQ ITI+SS GLS++E+++MVKEAE +A  D +RK  +++RN+AD  ++
Sbjct:  304 LDRVILVGGSTRIPAVQEAIKRETGKEPYKGVNPDEVVALGAAVQGGVLTGDVEGVLLLDVTPLSLGIETMGGVFTKLIERNTTIPTSKSQVFSTAADNQPAVDIHVLQGERPMSADNKTLGRFQLTDIPPAPRGIPQIEVTFDIDANGIVNVRAKDLGTSKEQAITIQSSSGLSDEEVDRMVKEAEANADADQKRKEEVELRNEADQLVF 514
[Close]
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_ARCB4 (Chaperone protein dnaK OS=Arcobacter butzleri (strain RM4018) GN=dnaK PE=2 SV=1)

HSP 1 Score: 286.96 bits (733), Expect = 1.367e-76
Identity = 143/212 (67.45%), Postives = 171/212 (80.66%), Query Frame = 1 
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYS 636
            +DE ++VGG TR+PK  +VV E FGK  +KGVNPDE VA GAA+Q G+LR DVK++LLLDVTPLSLGIETLGG+ T+LI++ TTIP KKSQVFSTA DNQ  V I V QGERE A DNKSLG FEL  IP APRG+PQIEVTFDIDANG++ VSAKDK TGKE +ITI  S GLS+ EIEKMV EAE + + D ++KA+I++RNQAD  ++S
Sbjct:  328 IDEIIMVGGSTRLPKANQVVKEFFGKDLNKGVNPDEVVAAGAAVQAGVLRGDVKDVLLLDVTPLSLGIETLGGVMTKLIDKGTTIPVKKSQVFSTADDNQPAVSIHVCQGEREFAKDNKSLGMFELSDIPAAPRGVPQIEVTFDIDANGVLNVSAKDKGTGKENKITISGSSGLSDAEIEKMVAEAEANKEADAKKKAVIEVRNQADALLHS 539
[Close]
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK2_SYNP6 (Chaperone protein dnaK 2 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=dnaK2 PE=2 SV=1)

HSP 1 Score: 286.96 bits (733), Expect = 1.367e-76
Identity = 141/217 (64.98%), Postives = 177/217 (81.57%), Query Frame = 1 
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYSI*EEL 651
            +DE +LVGG TR+P VQ +V ++ GK P++ VNPDE VA+GAAIQGG+L  +VK++LLLDVTPLSLG+ETLGG+ T+LI RNTTIPTKKS+ FSTAAD QT V I VLQGEREMASDNKSLG F L GIPPAPRG+PQIEV F IDANGI+ V+AKDK +GKEQ I+I  +  LS++E+++MVK+AE +A  D ER+  ID++NQADT +Y   ++L
Sbjct:  328 IDEIVLVGGSTRIPAVQAIVKQMTGKEPNQSVNPDEVVAIGAAIQGGVLAGEVKDILLLDVTPLSLGVETLGGVMTKLIPRNTTIPTKKSETFSTAADGQTNVEIHVLQGEREMASDNKSLGTFRLDGIPPAPRGVPQIEVIFVIDANGILNVTAKDKGSGKEQSISITGASTLSDNEVDRMVKDAEANAAADKERRERIDLKNQADTLVYQSEKQL 544
The following BLAST results are available for this feature:
BLAST of DC900131 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_SYMTH1.367e-7666.98Chaperone protein dnaK OS=Symbiobacterium thermoph... [more]
DNAK_RALEH1.367e-7668.40Chaperone protein dnaK OS=Ralstonia eutropha (stra... [more]
DNAK_CLOK51.367e-7668.72Chaperone protein dnaK OS=Clostridium kluyveri (st... [more]
DNAK_CLOK11.367e-7668.72Chaperone protein dnaK OS=Clostridium kluyveri (st... [more]
DNAK_BURTA1.367e-7667.92Chaperone protein dnaK OS=Burkholderia thailandens... [more]
DNAK_BACCQ1.367e-7666.82Chaperone protein dnaK OS=Bacillus cereus (strain ... [more]
DNAK_BACC71.367e-7666.82Chaperone protein dnaK OS=Bacillus cereus (strain ... [more]
DNAK_BACC11.367e-7666.82Chaperone protein dnaK OS=Bacillus cereus (strain ... [more]
DNAK_ARCB41.367e-7667.45Chaperone protein dnaK OS=Arcobacter butzleri (str... [more]
DNAK2_SYNP61.367e-7664.98Chaperone protein dnaK 2 OS=Synechococcus sp. (str... [more]

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Properties
Property NameValue
Genbank descriptionDC900131 VSS Citrus sinensis cDNA clone VS27V48 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900131 ID=DC900131; Name=DC900131; organism=Citrus sinensis; type=EST; length=1096bp
GTGGATGAGCNGCTTTTGGTTGGAGGAATGACCCGTGTGCCAAAGGTGCA
GGAAGTGGTCTCAGAAATCTTTGGTAAGAGTCCAAGCAAGGGAGTAAATC
CTGATGAGGCAGTTGCCCTTGGTGCTGCTATTCAAGGTGGTATTCTTCGT
GNNGACGTCAAAGAGTTGCTTCTCTTGGATGTTACACCTCTGTCACTGGG
TATTGAGACACTAGGTGGTATCTTCACCAGGTTGATCAATCGCAACACAA
CTATTCCAACAAAGAAGAGTCAGGTCTTCTCAACAGCAGCTGATAACCAG
ACTCAGGTGGGGATTAAGGTGCTTCAAGGTGAGCGCGAAATGGCATCTGA
CAACAAGTCCCTAGGAGAGTTTGAACTTGTGGGCATTCCACCAGCTCCTA
GAGGCATGCCTCAGATTGAGGTCACATTTGACATTGATGCCAATGGTATT
GTCACTGTTTCTGCAAAGGACAAGGCCACTGGCAAGGAACAGCAAATTAC
CATCCGCTCATCTGGAGGTCTATCAGAGGATGAAATTGAGAAGATGGTTA
AGGAAGCAGAATTGCATGCCCAGAGGGATAATGAAAGAAAAGCTCTGATT
GATATCAGAAACCAGGCGGATACCACCATCTACAGCATTTGAGAAGAGCT
TGGGTGAGTACAGAGAAAAGATTCCCAGTGAGGTTGCAAAAGAGATTGAG
GATGCTGTTGCAGATTTGAGAAAGGCCATGGGAGCTGACAATGTTGATGA
TATCAAGTCCAAGCTTGATGCAGCTAACAAAGCTGTCTCTAAGATTGGAC
AACACATGGCTGGTGGTTCTGGTGGTGGTGCTGGTTCTGGAGGTTCCCAG
GGTGGTGAACAGACTCCCGAGGCTGAGTATGAGGAGGTGAAAAAGTGAGC
ACAGAGGTAGTAAATTTCGTTCGTTGATGCTTCAAAAGGAGTCGGACATT
CANGAATGAGTCTTGTTTTGATTTGTAGTTTTAGGATATATGGCGGTTTT
GTATCTAAATTTTTATTTATTCAAGTTGTTAGGATAACGTTTTACTTTAT
TTTGAGAAACTGCACGAGCAAGTTAAAACCCTTTCCGGTGTATGGT
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