DC900131

Overview
NameDC900131
Unique NameDC900131
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1096
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12640 contig Csv1_Contig12640:546..1640. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_ACTP2 (Chaperone protein dnaK OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=dnaK PE=2 SV=1)

HSP 1 Score: 284.263 bits (726), Expect = 8.860e-76
Identity = 141/207 (68.12%), Postives = 174/207 (84.06%), Query Frame = 1 
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQAD 621
            +++ +LVGG TR+P VQ+ V+E FGK   K VNPDEAVA+GAA+QGG+L+ DVK++LLLDVTPLSLGIET+GG+ T LI +NTTIPTKKSQVFSTA DNQ+ V I VLQGER+ AS NKSLG+F L GI PAPRGMPQIEVTFDIDANG++ VSAKDK TGKEQQI I++S GLS++EIE+MV++AE +A+ D + + L+  RNQAD
Sbjct:  333 INDIILVGGQTRMPLVQQKVAEFFGKEARKDVNPDEAVAIGAAVQGGVLKGDVKDVLLLDVTPLSLGIETMGGVMTVLIEKNTTIPTKKSQVFSTAEDNQSAVTIHVLQGERKQASANKSLGQFNLEGINPAPRGMPQIEVTFDIDANGVINVSAKDKNTGKEQQIRIQASSGLSDEEIEQMVRDAEANAEADKKFEELVQARNQAD 539
[Close]
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_SALTY (Chaperone protein dnaK OS=Salmonella typhimurium GN=dnaK PE=2 SV=2)

HSP 1 Score: 283.878 bits (725), Expect = 1.157e-75
Identity = 141/212 (66.51%), Postives = 177/212 (83.49%), Query Frame = 1 
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYS 636
            +++ +LVGG TR+P VQ+ V+E FGK P K VNPDEAVA+GAA+QGG+L  DVK++LLLDVTPLSLGIET+GG+ T LI +NTTIPTK SQVFSTA DNQ+ V I VLQGER+ ASDNKSLG+F L GI PAPRGMPQIEVTFDIDA+GI+ VSAKDK +GKEQ+ITI++S GL+E+EI+KMV++AE +A+ D + + L+  RNQ D  ++S
Sbjct:  334 INDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVKDVLLLDVTPLSLGIETMGGVMTPLITKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRASDNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLNEEEIQKMVRDAEANAESDRKFEELVQTRNQGDHLLHS 545
[Close]
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_SALTI (Chaperone protein dnaK OS=Salmonella typhi GN=dnaK PE=2 SV=3)

HSP 1 Score: 283.878 bits (725), Expect = 1.157e-75
Identity = 141/212 (66.51%), Postives = 177/212 (83.49%), Query Frame = 1 
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYS 636
            +++ +LVGG TR+P VQ+ V+E FGK P K VNPDEAVA+GAA+QGG+L  DVK++LLLDVTPLSLGIET+GG+ T LI +NTTIPTK SQVFSTA DNQ+ V I VLQGER+ ASDNKSLG+F L GI PAPRGMPQIEVTFDIDA+GI+ VSAKDK +GKEQ+ITI++S GL+E+EI+KMV++AE +A+ D + + L+  RNQ D  ++S
Sbjct:  334 INDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVKDVLLLDVTPLSLGIETMGGVMTPLITKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRASDNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLNEEEIQKMVRDAEANAESDRKFEELVQTRNQGDHLLHS 545
[Close]
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_SALSV (Chaperone protein dnaK OS=Salmonella schwarzengrund (strain CVM19633) GN=dnaK PE=2 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 1.157e-75
Identity = 141/212 (66.51%), Postives = 177/212 (83.49%), Query Frame = 1 
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYS 636
            +++ +LVGG TR+P VQ+ V+E FGK P K VNPDEAVA+GAA+QGG+L  DVK++LLLDVTPLSLGIET+GG+ T LI +NTTIPTK SQVFSTA DNQ+ V I VLQGER+ ASDNKSLG+F L GI PAPRGMPQIEVTFDIDA+GI+ VSAKDK +GKEQ+ITI++S GL+E+EI+KMV++AE +A+ D + + L+  RNQ D  ++S
Sbjct:  334 INDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVKDVLLLDVTPLSLGIETMGGVMTPLITKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRASDNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLNEEEIQKMVRDAEANAESDRKFEELVQTRNQGDHLLHS 545
[Close]
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_SALPK (Chaperone protein dnaK OS=Salmonella paratyphi A (strain AKU_12601) GN=dnaK PE=2 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 1.157e-75
Identity = 141/212 (66.51%), Postives = 177/212 (83.49%), Query Frame = 1 
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYS 636
            +++ +LVGG TR+P VQ+ V+E FGK P K VNPDEAVA+GAA+QGG+L  DVK++LLLDVTPLSLGIET+GG+ T LI +NTTIPTK SQVFSTA DNQ+ V I VLQGER+ ASDNKSLG+F L GI PAPRGMPQIEVTFDIDA+GI+ VSAKDK +GKEQ+ITI++S GL+E+EI+KMV++AE +A+ D + + L+  RNQ D  ++S
Sbjct:  334 INDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVKDVLLLDVTPLSLGIETMGGVMTPLITKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRASDNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLNEEEIQKMVRDAEANAESDRKFEELVQTRNQGDHLLHS 545
[Close]
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_SALPC (Chaperone protein dnaK OS=Salmonella paratyphi C (strain RKS4594) GN=dnaK PE=2 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 1.157e-75
Identity = 141/212 (66.51%), Postives = 177/212 (83.49%), Query Frame = 1 
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYS 636
            +++ +LVGG TR+P VQ+ V+E FGK P K VNPDEAVA+GAA+QGG+L  DVK++LLLDVTPLSLGIET+GG+ T LI +NTTIPTK SQVFSTA DNQ+ V I VLQGER+ ASDNKSLG+F L GI PAPRGMPQIEVTFDIDA+GI+ VSAKDK +GKEQ+ITI++S GL+E+EI+KMV++AE +A+ D + + L+  RNQ D  ++S
Sbjct:  334 INDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVKDVLLLDVTPLSLGIETMGGVMTPLITKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRASDNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLNEEEIQKMVRDAEANAESDRKFEELVQTRNQGDHLLHS 545
[Close]
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_SALPB (Chaperone protein dnaK OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=dnaK PE=2 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 1.157e-75
Identity = 141/212 (66.51%), Postives = 177/212 (83.49%), Query Frame = 1 
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYS 636
            +++ +LVGG TR+P VQ+ V+E FGK P K VNPDEAVA+GAA+QGG+L  DVK++LLLDVTPLSLGIET+GG+ T LI +NTTIPTK SQVFSTA DNQ+ V I VLQGER+ ASDNKSLG+F L GI PAPRGMPQIEVTFDIDA+GI+ VSAKDK +GKEQ+ITI++S GL+E+EI+KMV++AE +A+ D + + L+  RNQ D  ++S
Sbjct:  334 INDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVKDVLLLDVTPLSLGIETMGGVMTPLITKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRASDNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLNEEEIQKMVRDAEANAESDRKFEELVQTRNQGDHLLHS 545
[Close]
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_SALPA (Chaperone protein dnaK OS=Salmonella paratyphi A GN=dnaK PE=2 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 1.157e-75
Identity = 141/212 (66.51%), Postives = 177/212 (83.49%), Query Frame = 1 
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYS 636
            +++ +LVGG TR+P VQ+ V+E FGK P K VNPDEAVA+GAA+QGG+L  DVK++LLLDVTPLSLGIET+GG+ T LI +NTTIPTK SQVFSTA DNQ+ V I VLQGER+ ASDNKSLG+F L GI PAPRGMPQIEVTFDIDA+GI+ VSAKDK +GKEQ+ITI++S GL+E+EI+KMV++AE +A+ D + + L+  RNQ D  ++S
Sbjct:  334 INDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVKDVLLLDVTPLSLGIETMGGVMTPLITKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRASDNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLNEEEIQKMVRDAEANAESDRKFEELVQTRNQGDHLLHS 545
[Close]
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_SALNS (Chaperone protein dnaK OS=Salmonella newport (strain SL254) GN=dnaK PE=2 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 1.157e-75
Identity = 141/212 (66.51%), Postives = 177/212 (83.49%), Query Frame = 1 
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYS 636
            +++ +LVGG TR+P VQ+ V+E FGK P K VNPDEAVA+GAA+QGG+L  DVK++LLLDVTPLSLGIET+GG+ T LI +NTTIPTK SQVFSTA DNQ+ V I VLQGER+ ASDNKSLG+F L GI PAPRGMPQIEVTFDIDA+GI+ VSAKDK +GKEQ+ITI++S GL+E+EI+KMV++AE +A+ D + + L+  RNQ D  ++S
Sbjct:  334 INDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVKDVLLLDVTPLSLGIETMGGVMTPLITKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRASDNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLNEEEIQKMVRDAEANAESDRKFEELVQTRNQGDHLLHS 545
[Close]
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_SALHS (Chaperone protein dnaK OS=Salmonella heidelberg (strain SL476) GN=dnaK PE=2 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 1.157e-75
Identity = 141/212 (66.51%), Postives = 177/212 (83.49%), Query Frame = 1 
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYS 636
            +++ +LVGG TR+P VQ+ V+E FGK P K VNPDEAVA+GAA+QGG+L  DVK++LLLDVTPLSLGIET+GG+ T LI +NTTIPTK SQVFSTA DNQ+ V I VLQGER+ ASDNKSLG+F L GI PAPRGMPQIEVTFDIDA+GI+ VSAKDK +GKEQ+ITI++S GL+E+EI+KMV++AE +A+ D + + L+  RNQ D  ++S
Sbjct:  334 INDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVKDVLLLDVTPLSLGIETMGGVMTPLITKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRASDNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLNEEEIQKMVRDAEANAESDRKFEELVQTRNQGDHLLHS 545
The following BLAST results are available for this feature:
BLAST of DC900131 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_ACTP28.860e-7668.12Chaperone protein dnaK OS=Actinobacillus pleuropne... [more]
DNAK_SALTY1.157e-7566.51Chaperone protein dnaK OS=Salmonella typhimurium G... [more]
DNAK_SALTI1.157e-7566.51Chaperone protein dnaK OS=Salmonella typhi GN=dnaK... [more]
DNAK_SALSV1.157e-7566.51Chaperone protein dnaK OS=Salmonella schwarzengrun... [more]
DNAK_SALPK1.157e-7566.51Chaperone protein dnaK OS=Salmonella paratyphi A (... [more]
DNAK_SALPC1.157e-7566.51Chaperone protein dnaK OS=Salmonella paratyphi C (... [more]
DNAK_SALPB1.157e-7566.51Chaperone protein dnaK OS=Salmonella paratyphi B (... [more]
DNAK_SALPA1.157e-7566.51Chaperone protein dnaK OS=Salmonella paratyphi A G... [more]
DNAK_SALNS1.157e-7566.51Chaperone protein dnaK OS=Salmonella newport (stra... [more]
DNAK_SALHS1.157e-7566.51Chaperone protein dnaK OS=Salmonella heidelberg (s... [more]

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Properties
Property NameValue
Genbank descriptionDC900131 VSS Citrus sinensis cDNA clone VS27V48 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900131 ID=DC900131; Name=DC900131; organism=Citrus sinensis; type=EST; length=1096bp
GTGGATGAGCNGCTTTTGGTTGGAGGAATGACCCGTGTGCCAAAGGTGCA
GGAAGTGGTCTCAGAAATCTTTGGTAAGAGTCCAAGCAAGGGAGTAAATC
CTGATGAGGCAGTTGCCCTTGGTGCTGCTATTCAAGGTGGTATTCTTCGT
GNNGACGTCAAAGAGTTGCTTCTCTTGGATGTTACACCTCTGTCACTGGG
TATTGAGACACTAGGTGGTATCTTCACCAGGTTGATCAATCGCAACACAA
CTATTCCAACAAAGAAGAGTCAGGTCTTCTCAACAGCAGCTGATAACCAG
ACTCAGGTGGGGATTAAGGTGCTTCAAGGTGAGCGCGAAATGGCATCTGA
CAACAAGTCCCTAGGAGAGTTTGAACTTGTGGGCATTCCACCAGCTCCTA
GAGGCATGCCTCAGATTGAGGTCACATTTGACATTGATGCCAATGGTATT
GTCACTGTTTCTGCAAAGGACAAGGCCACTGGCAAGGAACAGCAAATTAC
CATCCGCTCATCTGGAGGTCTATCAGAGGATGAAATTGAGAAGATGGTTA
AGGAAGCAGAATTGCATGCCCAGAGGGATAATGAAAGAAAAGCTCTGATT
GATATCAGAAACCAGGCGGATACCACCATCTACAGCATTTGAGAAGAGCT
TGGGTGAGTACAGAGAAAAGATTCCCAGTGAGGTTGCAAAAGAGATTGAG
GATGCTGTTGCAGATTTGAGAAAGGCCATGGGAGCTGACAATGTTGATGA
TATCAAGTCCAAGCTTGATGCAGCTAACAAAGCTGTCTCTAAGATTGGAC
AACACATGGCTGGTGGTTCTGGTGGTGGTGCTGGTTCTGGAGGTTCCCAG
GGTGGTGAACAGACTCCCGAGGCTGAGTATGAGGAGGTGAAAAAGTGAGC
ACAGAGGTAGTAAATTTCGTTCGTTGATGCTTCAAAAGGAGTCGGACATT
CANGAATGAGTCTTGTTTTGATTTGTAGTTTTAGGATATATGGCGGTTTT
GTATCTAAATTTTTATTTATTCAAGTTGTTAGGATAACGTTTTACTTTAT
TTTGAGAAACTGCACGAGCAAGTTAAAACCCTTTCCGGTGTATGGT
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