DC900131

Overview
NameDC900131
Unique NameDC900131
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1096
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12640 contig Csv1_Contig12640:546..1640. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_SALG2 (Chaperone protein dnaK OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=dnaK PE=2 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 1.157e-75
Identity = 141/212 (66.51%), Postives = 177/212 (83.49%), Query Frame = 1
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYS 636
            +++ +LVGG TR+P VQ+ V+E FGK P K VNPDEAVA+GAA+QGG+L  DVK++LLLDVTPLSLGIET+GG+ T LI +NTTIPTK SQVFSTA DNQ+ V I VLQGER+ ASDNKSLG+F L GI PAPRGMPQIEVTFDIDA+GI+ VSAKDK +GKEQ+ITI++S GL+E+EI+KMV++AE +A+ D + + L+  RNQ D  ++S
Sbjct:  334 INDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVKDVLLLDVTPLSLGIETMGGVMTPLITKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRASDNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLNEEEIQKMVRDAEANAESDRKFEELVQTRNQGDHLLHS 545          
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_SALEP (Chaperone protein dnaK OS=Salmonella enteritidis PT4 (strain P125109) GN=dnaK PE=2 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 1.157e-75
Identity = 141/212 (66.51%), Postives = 177/212 (83.49%), Query Frame = 1
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYS 636
            +++ +LVGG TR+P VQ+ V+E FGK P K VNPDEAVA+GAA+QGG+L  DVK++LLLDVTPLSLGIET+GG+ T LI +NTTIPTK SQVFSTA DNQ+ V I VLQGER+ ASDNKSLG+F L GI PAPRGMPQIEVTFDIDA+GI+ VSAKDK +GKEQ+ITI++S GL+E+EI+KMV++AE +A+ D + + L+  RNQ D  ++S
Sbjct:  334 INDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVKDVLLLDVTPLSLGIETMGGVMTPLITKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRASDNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLNEEEIQKMVRDAEANAESDRKFEELVQTRNQGDHLLHS 545          
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_SALDC (Chaperone protein dnaK OS=Salmonella dublin (strain CT_02021853) GN=dnaK PE=2 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 1.157e-75
Identity = 141/212 (66.51%), Postives = 177/212 (83.49%), Query Frame = 1
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYS 636
            +++ +LVGG TR+P VQ+ V+E FGK P K VNPDEAVA+GAA+QGG+L  DVK++LLLDVTPLSLGIET+GG+ T LI +NTTIPTK SQVFSTA DNQ+ V I VLQGER+ ASDNKSLG+F L GI PAPRGMPQIEVTFDIDA+GI+ VSAKDK +GKEQ+ITI++S GL+E+EI+KMV++AE +A+ D + + L+  RNQ D  ++S
Sbjct:  334 INDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVKDVLLLDVTPLSLGIETMGGVMTPLITKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRASDNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLNEEEIQKMVRDAEANAESDRKFEELVQTRNQGDHLLHS 545          
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_SALCH (Chaperone protein dnaK OS=Salmonella choleraesuis GN=dnaK PE=2 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 1.157e-75
Identity = 141/212 (66.51%), Postives = 177/212 (83.49%), Query Frame = 1
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYS 636
            +++ +LVGG TR+P VQ+ V+E FGK P K VNPDEAVA+GAA+QGG+L  DVK++LLLDVTPLSLGIET+GG+ T LI +NTTIPTK SQVFSTA DNQ+ V I VLQGER+ ASDNKSLG+F L GI PAPRGMPQIEVTFDIDA+GI+ VSAKDK +GKEQ+ITI++S GL+E+EI+KMV++AE +A+ D + + L+  RNQ D  ++S
Sbjct:  334 INDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVKDVLLLDVTPLSLGIETMGGVMTPLITKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRASDNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLNEEEIQKMVRDAEANAESDRKFEELVQTRNQGDHLLHS 545          
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_SALA4 (Chaperone protein dnaK OS=Salmonella agona (strain SL483) GN=dnaK PE=2 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 1.157e-75
Identity = 141/212 (66.51%), Postives = 177/212 (83.49%), Query Frame = 1
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYS 636
            +++ +LVGG TR+P VQ+ V+E FGK P K VNPDEAVA+GAA+QGG+L  DVK++LLLDVTPLSLGIET+GG+ T LI +NTTIPTK SQVFSTA DNQ+ V I VLQGER+ ASDNKSLG+F L GI PAPRGMPQIEVTFDIDA+GI+ VSAKDK +GKEQ+ITI++S GL+E+EI+KMV++AE +A+ D + + L+  RNQ D  ++S
Sbjct:  334 INDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVKDVLLLDVTPLSLGIETMGGVMTPLITKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRASDNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLNEEEIQKMVRDAEANAESDRKFEELVQTRNQGDHLLHS 545          
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_PORGI (Chaperone protein dnaK OS=Porphyromonas gingivalis GN=dnaK PE=2 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 1.157e-75
Identity = 140/217 (64.52%), Postives = 176/217 (81.11%), Query Frame = 1
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYSI*EEL 651
            +DE +LVGG TR+P +QE+V +IFGK+PSKGVNPDE VA+GAAIQGG+L  +VK++LLLDVTPLSLGIET+GG+ TRLI+ NTTIPTKKS++F+TA DNQ  V I VLQGER +A DNKS+G F L GI PAPR  PQIEVTFDIDANGI+ V+A DKATGK+Q I I +S GLS+DEI++M +EA+ +A+ D + K  ID  NQAD+ I+   ++L
Sbjct:  328 IDEVILVGGSTRIPAIQEIVEKIFGKAPSKGVNPDEVVAVGAAIQGGVLTGEVKDVLLLDVTPLSLGIETMGGVMTRLIDANTTIPTKKSEIFTTAVDNQPSVEIHVLQGERSLAKDNKSIGRFNLDGIAPAPRQTPQIEVTFDIDANGILNVTAHDKATGKKQNIRIEASSGLSDDEIKRMKEEAQANAEADKKEKERIDKINQADSMIFQTEKQL 544          
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_PORG3 (Chaperone protein dnaK OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) GN=dnaK PE=2 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 1.157e-75
Identity = 140/217 (64.52%), Postives = 176/217 (81.11%), Query Frame = 1
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYSI*EEL 651
            +DE +LVGG TR+P +QE+V +IFGK+PSKGVNPDE VA+GAAIQGG+L  +VK++LLLDVTPLSLGIET+GG+ TRLI+ NTTIPTKKS++F+TA DNQ  V I VLQGER +A DNKS+G F L GI PAPR  PQIEVTFDIDANGI+ V+A DKATGK+Q I I +S GLS+DEI++M +EA+ +A+ D + K  ID  NQAD+ I+   ++L
Sbjct:  328 IDEVILVGGSTRIPAIQEIVEKIFGKAPSKGVNPDEVVAVGAAIQGGVLTGEVKDVLLLDVTPLSLGIETMGGVMTRLIDANTTIPTKKSEIFTTAVDNQPSVEIHVLQGERSLAKDNKSIGRFNLDGIAPAPRQTPQIEVTFDIDANGILNVTAHDKATGKKQNIRIEASSGLSDDEIKRMKEEAQANAEADKKEKERIDKINQADSMIFQTEKQL 544          
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_HAHCH (Chaperone protein dnaK OS=Hahella chejuensis (strain KCTC 2396) GN=dnaK PE=2 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 1.157e-75
Identity = 142/212 (66.98%), Postives = 171/212 (80.66%), Query Frame = 1
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYS 636
            +DE +LVGG TR+P VQ  V++ FGK   K VNPDEAVA+GAAIQG +L  DVK++LLLDVTPLSL IET+GG+ T +I +NTTIPTKKSQVFSTA DNQT V I VLQGER+ A  NKSLG F+L G+PPAPRG+PQ+EVTFDIDANGI+ VSAKDKATGKEQ I I++S GLSEDEI+KMV++AE HA  D + + L   RNQAD  +++
Sbjct:  333 IDEVILVGGQTRMPLVQSKVADFFGKEARKDVNPDEAVAIGAAIQGAVLSGDVKDVLLLDVTPLSLSIETMGGVSTPIIEKNTTIPTKKSQVFSTAEDNQTAVTIHVLQGERKQAQMNKSLGRFDLTGLPPAPRGVPQVEVTFDIDANGIMHVSAKDKATGKEQSIVIKASSGLSEDEIDKMVQDAEAHAAEDKKFEELAASRNQADALVHA 544          
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_CLOB8 (Chaperone protein dnaK OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=dnaK PE=2 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 1.157e-75
Identity = 148/226 (65.49%), Postives = 174/226 (76.99%), Query Frame = 1
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYSI*EELG*VQRKDSQ 678
            +D+ +LVGG TR+P V E V    GK PSKGVNPDE VA+GAAIQ G+L  +VK+++LLDVTPL+LGIET GGI T LI RNTTIPTKKSQVFSTAADNQT V I V+QGER+MA DNKSLG+F L GI PAPRG+PQIEVTFDIDANGIV VSA DK TGKE  ITI +S  LS+DE++K VKEAE  A+ D +RK  ++  N AD TIY I + L  V  K ++
Sbjct:  306 IDKIILVGGSTRIPAVVEAVKNFTGKEPSKGVNPDECVAVGAAIQAGVLTGEVKDVVLLDVTPLTLGIETAGGIATPLIERNTTIPTKKSQVFSTAADNQTSVEINVVQGERQMAMDNKSLGQFTLSGIAPAPRGIPQIEVTFDIDANGIVKVSALDKGTGKEANITITASTNLSDDEVDKAVKEAEKFAEEDKKRKEKVEAVNNADQTIYQIEKTLNEVGDKATE 531          
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_SACD2 (Chaperone protein dnaK OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=dnaK PE=2 SV=1)

HSP 1 Score: 283.493 bits (724), Expect = 1.511e-75
Identity = 142/212 (66.98%), Postives = 172/212 (81.13%), Query Frame = 1
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYS 636
            +D+ +LVGG TR+P VQ  V++ FGK P K VNPDEAVA+GAAIQG +L  DVK++LLLDVTPLSLGIET+GG+ T LI +NTTIPTKKSQVFSTA DNQT V I V+QGER+ AS NKSLG F+L  IPPAPRGMPQIEVTFDIDANGI+ VSAKDKATGKEQ I I++S GLS+DEIEKMV++AE +A  D + + ++  RN  +  I++
Sbjct:  334 IDDVILVGGQTRMPMVQAAVAKFFGKEPRKDVNPDEAVAMGAAIQGAVLSGDVKDVLLLDVTPLSLGIETMGGVATPLIEKNTTIPTKKSQVFSTADDNQTAVTIHVVQGERKQASQNKSLGRFDLADIPPAPRGMPQIEVTFDIDANGILNVSAKDKATGKEQSIVIKASSGLSDDEIEKMVQDAEANADADRKFEEVVTARNTLEGLIHA 545          
The following BLAST results are available for this feature:
BLAST of DC900131 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_SALG21.157e-7566.51Chaperone protein dnaK OS=Salmonella gallinarum (s... [more]
DNAK_SALEP1.157e-7566.51Chaperone protein dnaK OS=Salmonella enteritidis P... [more]
DNAK_SALDC1.157e-7566.51Chaperone protein dnaK OS=Salmonella dublin (strai... [more]
DNAK_SALCH1.157e-7566.51Chaperone protein dnaK OS=Salmonella choleraesuis ... [more]
DNAK_SALA41.157e-7566.51Chaperone protein dnaK OS=Salmonella agona (strain... [more]
DNAK_PORGI1.157e-7564.52Chaperone protein dnaK OS=Porphyromonas gingivalis... [more]
DNAK_PORG31.157e-7564.52Chaperone protein dnaK OS=Porphyromonas gingivalis... [more]
DNAK_HAHCH1.157e-7566.98Chaperone protein dnaK OS=Hahella chejuensis (stra... [more]
DNAK_CLOB81.157e-7565.49Chaperone protein dnaK OS=Clostridium beijerinckii... [more]
DNAK_SACD21.511e-7566.98Chaperone protein dnaK OS=Saccharophagus degradans... [more]

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Properties
Property NameValue
Genbank descriptionDC900131 VSS Citrus sinensis cDNA clone VS27V48 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900131 ID=DC900131; Name=DC900131; organism=Citrus sinensis; type=EST; length=1096bp
GTGGATGAGCNGCTTTTGGTTGGAGGAATGACCCGTGTGCCAAAGGTGCA
GGAAGTGGTCTCAGAAATCTTTGGTAAGAGTCCAAGCAAGGGAGTAAATC
CTGATGAGGCAGTTGCCCTTGGTGCTGCTATTCAAGGTGGTATTCTTCGT
GNNGACGTCAAAGAGTTGCTTCTCTTGGATGTTACACCTCTGTCACTGGG
TATTGAGACACTAGGTGGTATCTTCACCAGGTTGATCAATCGCAACACAA
CTATTCCAACAAAGAAGAGTCAGGTCTTCTCAACAGCAGCTGATAACCAG
ACTCAGGTGGGGATTAAGGTGCTTCAAGGTGAGCGCGAAATGGCATCTGA
CAACAAGTCCCTAGGAGAGTTTGAACTTGTGGGCATTCCACCAGCTCCTA
GAGGCATGCCTCAGATTGAGGTCACATTTGACATTGATGCCAATGGTATT
GTCACTGTTTCTGCAAAGGACAAGGCCACTGGCAAGGAACAGCAAATTAC
CATCCGCTCATCTGGAGGTCTATCAGAGGATGAAATTGAGAAGATGGTTA
AGGAAGCAGAATTGCATGCCCAGAGGGATAATGAAAGAAAAGCTCTGATT
GATATCAGAAACCAGGCGGATACCACCATCTACAGCATTTGAGAAGAGCT
TGGGTGAGTACAGAGAAAAGATTCCCAGTGAGGTTGCAAAAGAGATTGAG
GATGCTGTTGCAGATTTGAGAAAGGCCATGGGAGCTGACAATGTTGATGA
TATCAAGTCCAAGCTTGATGCAGCTAACAAAGCTGTCTCTAAGATTGGAC
AACACATGGCTGGTGGTTCTGGTGGTGGTGCTGGTTCTGGAGGTTCCCAG
GGTGGTGAACAGACTCCCGAGGCTGAGTATGAGGAGGTGAAAAAGTGAGC
ACAGAGGTAGTAAATTTCGTTCGTTGATGCTTCAAAAGGAGTCGGACATT
CANGAATGAGTCTTGTTTTGATTTGTAGTTTTAGGATATATGGCGGTTTT
GTATCTAAATTTTTATTTATTCAAGTTGTTAGGATAACGTTTTACTTTAT
TTTGAGAAACTGCACGAGCAAGTTAAAACCCTTTCCGGTGTATGGT
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