CN186023

Overview
NameCN186023
Unique NameCN186023
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length790
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN186023 vs. ExPASy Swiss-Prot
Match: LLDD_PSEMY (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas mendocina (strain ymp) GN=lldD PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.034e-31
Identity = 68/135 (50.37%), Postives = 89/135 (65.93%), Query Frame = -2 
Query:  259 DASLSWKDLEWLRSITNLPILIKGILTREDAIKAVEVGVAGIIVSNHGARQLDYSPATISALEEVVHAVKGRVPILMDGGVRRGTDVFKALALGAQAVLIGRPVVYGLAAKGEYGVRRVIEMLKDEFELTMALTG 663
            D S+SWKDLEW+R   + P++IKGIL  EDA  AV  G  GIIVSNHG RQLD   ++  AL  +  AVKG + IL D G+R G DV + LALGA  VL+GR  +Y LA  G+ GV  ++++++ E  + M LTG
Sbjct:  229 DPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVTFGADGIIVSNHGGRQLDGVLSSARALPAIADAVKGELKILADSGIRTGLDVVRMLALGADTVLLGRAFIYALAVAGQAGVSNLLDLIEKEMRVAMVLTG 363
[Close]
BLAST of CN186023 vs. ExPASy Swiss-Prot
Match: LLDD_ECOSM (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=lldD PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.034e-31
Identity = 71/171 (41.52%), Postives = 100/171 (58.48%), Query Frame = -2 
Query:  223 GLLSTKVSSDTG-SNFEADANETMDASLSWKDLEWLRSITNLPILIKGILTREDAIKAVEVGVAGIIVSNHGARQLDYSPATISALEEVVHAVKGRVPILMDGGVRRGTDVFKALALGAQAVLIGRPVVYGLAAKGEYGVRRVIEMLKDEFELTMALTGCPRCETYYQEDM 732
            G +S  +   TG  ++        D S+SWKDLEW+R   + P++IKGIL  EDA  AV  G  GI+VSNHG RQLD   ++  AL  +  AVKG + IL D G+R G DV + +ALGA  VL+GR  +Y LA  G+ GV  ++ +++ E ++ M LTG        Q+ +
Sbjct:  205 GNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTLTGAKSISEITQDSL 375
[Close]
BLAST of CN186023 vs. ExPASy Swiss-Prot
Match: LLDD_ECOSE (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli (strain SE11) GN=lldD PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.034e-31
Identity = 71/171 (41.52%), Postives = 100/171 (58.48%), Query Frame = -2 
Query:  223 GLLSTKVSSDTG-SNFEADANETMDASLSWKDLEWLRSITNLPILIKGILTREDAIKAVEVGVAGIIVSNHGARQLDYSPATISALEEVVHAVKGRVPILMDGGVRRGTDVFKALALGAQAVLIGRPVVYGLAAKGEYGVRRVIEMLKDEFELTMALTGCPRCETYYQEDM 732
            G +S  +   TG  ++        D S+SWKDLEW+R   + P++IKGIL  EDA  AV  G  GI+VSNHG RQLD   ++  AL  +  AVKG + IL D G+R G DV + +ALGA  VL+GR  +Y LA  G+ GV  ++ +++ E ++ M LTG        Q+ +
Sbjct:  205 GNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTLTGAKSISEITQDSL 375
[Close]
BLAST of CN186023 vs. ExPASy Swiss-Prot
Match: LLDD_ECOLU (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=lldD PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.034e-31
Identity = 71/171 (41.52%), Postives = 100/171 (58.48%), Query Frame = -2 
Query:  223 GLLSTKVSSDTG-SNFEADANETMDASLSWKDLEWLRSITNLPILIKGILTREDAIKAVEVGVAGIIVSNHGARQLDYSPATISALEEVVHAVKGRVPILMDGGVRRGTDVFKALALGAQAVLIGRPVVYGLAAKGEYGVRRVIEMLKDEFELTMALTGCPRCETYYQEDM 732
            G +S  +   TG  ++        D S+SWKDLEW+R   + P++IKGIL  EDA  AV  G  GI+VSNHG RQLD   ++  AL  +  AVKG + IL D G+R G DV + +ALGA  VL+GR  +Y LA  G+ GV  ++ +++ E ++ M LTG        Q+ +
Sbjct:  205 GNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTLTGAKSISEITQDSL 375
[Close]
BLAST of CN186023 vs. ExPASy Swiss-Prot
Match: LLDD_ECOLI (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli (strain K12) GN=lldD PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.034e-31
Identity = 71/171 (41.52%), Postives = 100/171 (58.48%), Query Frame = -2 
Query:  223 GLLSTKVSSDTG-SNFEADANETMDASLSWKDLEWLRSITNLPILIKGILTREDAIKAVEVGVAGIIVSNHGARQLDYSPATISALEEVVHAVKGRVPILMDGGVRRGTDVFKALALGAQAVLIGRPVVYGLAAKGEYGVRRVIEMLKDEFELTMALTGCPRCETYYQEDM 732
            G +S  +   TG  ++        D S+SWKDLEW+R   + P++IKGIL  EDA  AV  G  GI+VSNHG RQLD   ++  AL  +  AVKG + IL D G+R G DV + +ALGA  VL+GR  +Y LA  G+ GV  ++ +++ E ++ M LTG        Q+ +
Sbjct:  205 GNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTLTGAKSISEITQDSL 375
[Close]
BLAST of CN186023 vs. ExPASy Swiss-Prot
Match: LLDD_ECOLC (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=lldD PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.034e-31
Identity = 71/171 (41.52%), Postives = 100/171 (58.48%), Query Frame = -2 
Query:  223 GLLSTKVSSDTG-SNFEADANETMDASLSWKDLEWLRSITNLPILIKGILTREDAIKAVEVGVAGIIVSNHGARQLDYSPATISALEEVVHAVKGRVPILMDGGVRRGTDVFKALALGAQAVLIGRPVVYGLAAKGEYGVRRVIEMLKDEFELTMALTGCPRCETYYQEDM 732
            G +S  +   TG  ++        D S+SWKDLEW+R   + P++IKGIL  EDA  AV  G  GI+VSNHG RQLD   ++  AL  +  AVKG + IL D G+R G DV + +ALGA  VL+GR  +Y LA  G+ GV  ++ +++ E ++ M LTG        Q+ +
Sbjct:  205 GNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTLTGAKSISEITQDSL 375
[Close]
BLAST of CN186023 vs. ExPASy Swiss-Prot
Match: LLDD_ECOL6 (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O6 GN=lldD PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.034e-31
Identity = 71/171 (41.52%), Postives = 100/171 (58.48%), Query Frame = -2 
Query:  223 GLLSTKVSSDTG-SNFEADANETMDASLSWKDLEWLRSITNLPILIKGILTREDAIKAVEVGVAGIIVSNHGARQLDYSPATISALEEVVHAVKGRVPILMDGGVRRGTDVFKALALGAQAVLIGRPVVYGLAAKGEYGVRRVIEMLKDEFELTMALTGCPRCETYYQEDM 732
            G +S  +   TG  ++        D S+SWKDLEW+R   + P++IKGIL  EDA  AV  G  GI+VSNHG RQLD   ++  AL  +  AVKG + IL D G+R G DV + +ALGA  VL+GR  +Y LA  G+ GV  ++ +++ E ++ M LTG        Q+ +
Sbjct:  205 GNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTLTGAKSISEITQDSL 375
[Close]
BLAST of CN186023 vs. ExPASy Swiss-Prot
Match: LLDD_ECOL5 (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=lldD PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.034e-31
Identity = 71/171 (41.52%), Postives = 100/171 (58.48%), Query Frame = -2 
Query:  223 GLLSTKVSSDTG-SNFEADANETMDASLSWKDLEWLRSITNLPILIKGILTREDAIKAVEVGVAGIIVSNHGARQLDYSPATISALEEVVHAVKGRVPILMDGGVRRGTDVFKALALGAQAVLIGRPVVYGLAAKGEYGVRRVIEMLKDEFELTMALTGCPRCETYYQEDM 732
            G +S  +   TG  ++        D S+SWKDLEW+R   + P++IKGIL  EDA  AV  G  GI+VSNHG RQLD   ++  AL  +  AVKG + IL D G+R G DV + +ALGA  VL+GR  +Y LA  G+ GV  ++ +++ E ++ M LTG        Q+ +
Sbjct:  205 GNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTLTGAKSISEITQDSL 375
[Close]
BLAST of CN186023 vs. ExPASy Swiss-Prot
Match: LLDD_ECOHS (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O9:H4 (strain HS) GN=lldD PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.034e-31
Identity = 71/171 (41.52%), Postives = 100/171 (58.48%), Query Frame = -2 
Query:  223 GLLSTKVSSDTG-SNFEADANETMDASLSWKDLEWLRSITNLPILIKGILTREDAIKAVEVGVAGIIVSNHGARQLDYSPATISALEEVVHAVKGRVPILMDGGVRRGTDVFKALALGAQAVLIGRPVVYGLAAKGEYGVRRVIEMLKDEFELTMALTGCPRCETYYQEDM 732
            G +S  +   TG  ++        D S+SWKDLEW+R   + P++IKGIL  EDA  AV  G  GI+VSNHG RQLD   ++  AL  +  AVKG + IL D G+R G DV + +ALGA  VL+GR  +Y LA  G+ GV  ++ +++ E ++ M LTG        Q+ +
Sbjct:  205 GNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTLTGAKSISEITQDSL 375
[Close]
BLAST of CN186023 vs. ExPASy Swiss-Prot
Match: LLDD_ECODH (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli (strain K12 / DH10B) GN=lldD PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.034e-31
Identity = 71/171 (41.52%), Postives = 100/171 (58.48%), Query Frame = -2 
Query:  223 GLLSTKVSSDTG-SNFEADANETMDASLSWKDLEWLRSITNLPILIKGILTREDAIKAVEVGVAGIIVSNHGARQLDYSPATISALEEVVHAVKGRVPILMDGGVRRGTDVFKALALGAQAVLIGRPVVYGLAAKGEYGVRRVIEMLKDEFELTMALTGCPRCETYYQEDM 732
            G +S  +   TG  ++        D S+SWKDLEW+R   + P++IKGIL  EDA  AV  G  GI+VSNHG RQLD   ++  AL  +  AVKG + IL D G+R G DV + +ALGA  VL+GR  +Y LA  G+ GV  ++ +++ E ++ M LTG        Q+ +
Sbjct:  205 GNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTLTGAKSISEITQDSL 375
The following BLAST results are available for this feature:
BLAST of CN186023 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
LLDD_PSEMY4.034e-3150.37L-lactate dehydrogenase [cytochrome] OS=Pseudomona... [more]
LLDD_ECOSM4.034e-3141.52L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECOSE4.034e-3141.52L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECOLU4.034e-3141.52L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECOLI4.034e-3141.52L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECOLC4.034e-3141.52L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECOL64.034e-3141.52L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECOL54.034e-3141.52L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECOHS4.034e-3141.52L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECODH4.034e-3141.52L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002D23_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002D23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186023 ID=CN186023; Name=CN186023; organism=Citrus sinensis; type=EST; length=790bp
TTTTTTTTTTTTTTTTTACCAAATGGTTGTATAATATCCCTTTTAGATTC
AATACCTAATACACATACAAANATAATACAAATACCACTTGTTATTAAAN
ATAATACACATACAACACTAATATATATAGAGTGGTGTCAAAACGCACCC
CTTAAACATTTCTTGCAACACCAATAATATTTACACGCATCGAATGGGAT
TCTCTCCTCGCTCAGGTTCTCACATGTCTTCCTGGTAATATGTTTCACAC
CTAGGACAGCCAGTAAGGGCCATGGTCAACTCAAACTCATCCTTCAGCAT
TTCGATGACGCGTCTCACCCCATATTCCCCTTTTGCAGCAAGGCCGTAGA
CTACAGGCCTTCCAATAAGTACAGCTTGTGCACCGAGGGCCAATGCCTTG
AAAACATCTGTTCCTCGCCGCACTCCTCCATCCATAAGAATTGGAACTCT
TCCTTTAACGGCATGAACCACCTCTTCCAGAGCAGAAATAGTGGCAGGAC
TATAATCTAACTGTCGAGCTCCGTGATTGGAGACAATAATCCCAGCAACA
CCTACTTCCACAGCTTTTATTGCATCTTCACGAGTAAGTATCCCCTTGAT
CAAAATTGGTAAGTTTGTAATAGATCTTAGCCATTCTAAATCCTTCCAAC
TTAAAGAAGCATCCATGGTCTCGTTGGCATCAGCTTCAAAATTCGAACCT
GTATCAGAGCTGACTTTGGTTGATAAGAGGCCTTCCAAATTCTTCAACGG
CGGTGTAATCATTTTGTTCTTTATATCTGCCTCCCTTCTA
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