CN186013

Overview
NameCN186013
Unique NameCN186013
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length786
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186013 vs. ExPASy Swiss-Prot
Match: METK4_ARATH (S-adenosylmethionine synthetase 4 OS=Arabidopsis thaliana GN=METK4 PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.734e-18
Identity = 44/53 (83.02%), Postives = 50/53 (94.34%), Query Frame = -3
Query:  152 METFLFTSESVNEGYPDKLCDHISDAILDACLEQDPDRKLACETCTK-DLVMV 307
            ME+FLFTSESVNEG+PDKLCD ISDAILDACLEQDP+ K+ACETCTK ++VMV
Sbjct:    1 MESFLFTSESVNEGHPDKLCDQISDAILDACLEQDPESKVACETCTKTNMVMV 53          
BLAST of CN186013 vs. ExPASy Swiss-Prot
Match: METK2_BRAJU (S-adenosylmethionine synthetase 2 OS=Brassica juncea GN=MSAMS2 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.734e-18
Identity = 44/53 (83.02%), Postives = 50/53 (94.34%), Query Frame = -3
Query:  152 METFLFTSESVNEGYPDKLCDHISDAILDACLEQDPDRKLACETCTK-DLVMV 307
            ME+FLFTSESVNEG+PDKLCD ISDAILDACLEQDP+ K+ACETCTK ++VMV
Sbjct:    1 MESFLFTSESVNEGHPDKLCDQISDAILDACLEQDPESKVACETCTKTNMVMV 53          
BLAST of CN186013 vs. ExPASy Swiss-Prot
Match: METK1_VITVI (S-adenosylmethionine synthetase 1 OS=Vitis vinifera GN=METK1 PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.734e-18
Identity = 43/53 (81.13%), Postives = 50/53 (94.34%), Query Frame = -3
Query:  152 METFLFTSESVNEGYPDKLCDHISDAILDACLEQDPDRKLACETCTK-DLVMV 307
            M+TFLFTSESVNEG+PDKLCD +SDAILDACLEQDP+ K+ACETCTK ++VMV
Sbjct:    1 MDTFLFTSESVNEGHPDKLCDQVSDAILDACLEQDPESKVACETCTKTNMVMV 53          
BLAST of CN186013 vs. ExPASy Swiss-Prot
Match: METK1_PICSI (S-adenosylmethionine synthetase 1 OS=Picea sitchensis GN=METK1 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.734e-18
Identity = 43/53 (81.13%), Postives = 50/53 (94.34%), Query Frame = -3
Query:  152 METFLFTSESVNEGYPDKLCDHISDAILDACLEQDPDRKLACETCTK-DLVMV 307
            M+TFLFTSESVNEG+PDKLCD ISDAILDACLEQDP+ K+ACETCTK ++VM+
Sbjct:    1 MDTFLFTSESVNEGHPDKLCDQISDAILDACLEQDPESKVACETCTKTNMVMI 53          
BLAST of CN186013 vs. ExPASy Swiss-Prot
Match: METK_MUSAC (S-adenosylmethionine synthetase OS=Musa acuminata GN=METK PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.265e-18
Identity = 43/52 (82.69%), Postives = 49/52 (94.23%), Query Frame = -3
Query:  152 ETFLFTSESVNEGYPDKLCDHISDAILDACLEQDPDRKLACETCTK-DLVMV 304
            +TFLFTSESVNEG+PDKLCD ISDA+LDACLEQDPD K+ACETCTK ++VMV
Sbjct:    3 DTFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMV 54          
BLAST of CN186013 vs. ExPASy Swiss-Prot
Match: METK_MEDFA (S-adenosylmethionine synthetase OS=Medicago falcata GN=SAMS PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.265e-18
Identity = 43/52 (82.69%), Postives = 49/52 (94.23%), Query Frame = -3
Query:  152 ETFLFTSESVNEGYPDKLCDHISDAILDACLEQDPDRKLACETCTK-DLVMV 304
            ETFL+TSESVNEG+PDKLCD ISDA+LDACLEQDPD K+ACETCTK ++VMV
Sbjct:    4 ETFLYTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMV 55          
BLAST of CN186013 vs. ExPASy Swiss-Prot
Match: METK_CAMSI (S-adenosylmethionine synthetase OS=Camellia sinensis GN=SAM PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.265e-18
Identity = 44/53 (83.02%), Postives = 49/53 (92.45%), Query Frame = -3
Query:  152 METFLFTSESVNEGYPDKLCDHISDAILDACLEQDPDRKLACETCTK-DLVMV 307
            METFLFTSESVNEG+PDKLCD ISDA+LDACLEQD D K+ACETCTK ++VMV
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDQDSKVACETCTKTNMVMV 53          
BLAST of CN186013 vs. ExPASy Swiss-Prot
Match: METK2_PICSI (S-adenosylmethionine synthetase 2 OS=Picea sitchensis GN=METK2 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.265e-18
Identity = 44/53 (83.02%), Postives = 49/53 (92.45%), Query Frame = -3
Query:  152 METFLFTSESVNEGYPDKLCDHISDAILDACLEQDPDRKLACETCTK-DLVMV 307
            METFLFTSESVNEG+PDKLCD ISDA+LDACL QDPD K+ACETCTK ++VMV
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLIQDPDSKVACETCTKTNMVMV 53          
BLAST of CN186013 vs. ExPASy Swiss-Prot
Match: METK2_ACTCH (S-adenosylmethionine synthetase 2 OS=Actinidia chinensis GN=SAM2 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.265e-18
Identity = 43/53 (81.13%), Postives = 50/53 (94.34%), Query Frame = -3
Query:  152 METFLFTSESVNEGYPDKLCDHISDAILDACLEQDPDRKLACETCTK-DLVMV 307
            ME+FLFTSESVNEG+PDKLCD +SDAILDACLEQDP+ K+ACETCTK ++VMV
Sbjct:    1 MESFLFTSESVNEGHPDKLCDQVSDAILDACLEQDPESKVACETCTKTNMVMV 53          
BLAST of CN186013 vs. ExPASy Swiss-Prot
Match: METK2_SOLLC (S-adenosylmethionine synthetase 2 OS=Solanum lycopersicum GN=SAM2 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.958e-18
Identity = 43/53 (81.13%), Postives = 49/53 (92.45%), Query Frame = -3
Query:  152 METFLFTSESVNEGYPDKLCDHISDAILDACLEQDPDRKLACETCTK-DLVMV 307
            METFLFTSESVNEG+PDKLCD +SDA+LDACL QDP+ K+ACETCTK +LVMV
Sbjct:    1 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPESKVACETCTKTNLVMV 53          
The following BLAST results are available for this feature:
BLAST of CN186013 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 211
Match NameE-valueIdentityDescription
METK4_ARATH1.734e-1883.02S-adenosylmethionine synthetase 4 OS=Arabidopsis t... [more]
METK2_BRAJU1.734e-1883.02S-adenosylmethionine synthetase 2 OS=Brassica junc... [more]
METK1_VITVI1.734e-1881.13S-adenosylmethionine synthetase 1 OS=Vitis vinifer... [more]
METK1_PICSI1.734e-1881.13S-adenosylmethionine synthetase 1 OS=Picea sitchen... [more]
METK_MUSAC2.265e-1882.69S-adenosylmethionine synthetase OS=Musa acuminata ... [more]
METK_MEDFA2.265e-1882.69S-adenosylmethionine synthetase OS=Medicago falcat... [more]
METK_CAMSI2.265e-1883.02S-adenosylmethionine synthetase OS=Camellia sinens... [more]
METK2_PICSI2.265e-1883.02S-adenosylmethionine synthetase 2 OS=Picea sitchen... [more]
METK2_ACTCH2.265e-1881.13S-adenosylmethionine synthetase 2 OS=Actinidia chi... [more]
METK2_SOLLC2.958e-1881.13S-adenosylmethionine synthetase 2 OS=Solanum lycop... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002D17_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002D17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186013 ID=CN186013; Name=CN186013; organism=Citrus sinensis; type=EST; length=786bp
TTTTTTTTTTTTTTTTGAATTTACACTTCTATTAACTACCAAGTCCCATT
TATACTCTACACACATAATATTAATAAACTATATATGAATAAACAAACAT
AAAATCCTCAAATCAAAAGCAATTCTCGGCCGCAATATACAATAGCAATA
CAACCATAACCAAGTCTTTGGTACAGGTTTCACAAGCCAACTTCCTATCT
GGGTCTTGTTCGAGACAAGCATCGAGAATGGCATCGGAGATATGATCACA
GAGCTTGTCTGGATAACCCTCGTTCACAGATTCTGAAGTGAACAAAAAAG
TCTCCATTTTTTCTTCAAAAACTGTAGACTGCGGCACCAAAGATGACTGC
GTGTGAGGGGCTAACGATGGCGTCACTGTGCTTGAGGGGAGGGGCTGTGC
TAGGAGGCCGTGCACGTGAGGAAGAGAGGGGCTAAGCTGACACGAGGGAG
AGACATGCTCACAAGGAAGAAACTGAGAGGGGCTGAGCTGAAGTTCTGCG
TCGTGTGGAGAGGGAGAAACGCGAGGCTGAGAGGTGAGGGGGAGAGGCGT
GGGAAACAACCGCTTCAAGTTTTAAATTAACAGCATCAAACTAACCCAAC
AAAACTAAAACAAATATTCTCATACTGGGTAAAGTTCCATCAAGTGCAGC
AAAGTAAAAAGCATACAAACAAAAATAAAGGCATTTAGAAAAGAGATGTT
CCCTTTCCCTTCTTGTCTCCACCAATTTCAAAGTGCTTGCACCTCTTGAT
GGGATGTTGAGACACATGCTTGCAACCCTGGCATTG
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