CN186013

Overview
NameCN186013
Unique NameCN186013
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length786
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186013 vs. ExPASy Swiss-Prot
Match: METK_MESCR (S-adenosylmethionine synthetase OS=Mesembryanthemum crystallinum GN=METK PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.271e-17
Identity = 42/53 (79.25%), Postives = 48/53 (90.57%), Query Frame = -3
Query:  152 METFLFTSESVNEGYPDKLCDHISDAILDACLEQDPDRKLACETCTK-DLVMV 307
            M+TFLFTSESVNEG+PDKLCD ISDA+LDACL QD + K+ACETCTK +LVMV
Sbjct:    1 MDTFLFTSESVNEGHPDKLCDQISDAVLDACLAQDAESKVACETCTKTNLVMV 53          
BLAST of CN186013 vs. ExPASy Swiss-Prot
Match: METK3_ORYSJ (S-adenosylmethionine synthetase 3 OS=Oryza sativa subsp. japonica GN=METK3 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.271e-17
Identity = 40/54 (74.07%), Postives = 50/54 (92.59%), Query Frame = -3
Query:  152 KMETFLFTSESVNEGYPDKLCDHISDAILDACLEQDPDRKLACETCTK-DLVMV 310
            +++TFLFTSESVNEG+PDKLCD ISDA+LDACL +DP+ K+ACETCTK ++VMV
Sbjct:    3 EVDTFLFTSESVNEGHPDKLCDQISDAVLDACLAEDPESKVACETCTKTNMVMV 56          
BLAST of CN186013 vs. ExPASy Swiss-Prot
Match: METK1_TRIMO (S-adenosylmethionine synthetase 1 OS=Triticum monococcum GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.579e-17
Identity = 41/52 (78.85%), Postives = 47/52 (90.38%), Query Frame = -3
Query:  152 ETFLFTSESVNEGYPDKLCDHISDAILDACLEQDPDRKLACETCTK-DLVMV 304
            ETFLFTSESVNEG+PDKLCD +SDA+LDACL QD D K+ACETCTK ++VMV
Sbjct:    4 ETFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDADSKVACETCTKTNMVMV 55          
BLAST of CN186013 vs. ExPASy Swiss-Prot
Match: METK_CHLRE (S-adenosylmethionine synthetase OS=Chlamydomonas reinhardtii GN=METM PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 7.286e-17
Identity = 39/53 (73.58%), Postives = 48/53 (90.57%), Query Frame = -3
Query:  152 METFLFTSESVNEGYPDKLCDHISDAILDACLEQDPDRKLACETCTK-DLVMV 307
            +E+FL+TSESVNEG+PDK+CD +SDA+LDACLEQDPD K+ACETC K  +VMV
Sbjct:    4 LESFLYTSESVNEGHPDKICDQVSDAVLDACLEQDPDSKVACETCCKTGMVMV 56          
BLAST of CN186013 vs. ExPASy Swiss-Prot
Match: METK2_DIACA (S-adenosylmethionine synthetase 2 OS=Dianthus caryophyllus GN=SAM2 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.623e-16
Identity = 41/52 (78.85%), Postives = 47/52 (90.38%), Query Frame = -3
Query:  152 ETFLFTSESVNEGYPDKLCDHISDAILDACLEQDPDRKLACETCTK-DLVMV 304
            +TFLFTSESVNEG+PDKLCD ISDA+LDACL QD + K+ACETCTK +LVMV
Sbjct:    6 DTFLFTSESVNEGHPDKLCDQISDAVLDACLAQDAESKVACETCTKTNLVMV 57          
BLAST of CN186013 vs. ExPASy Swiss-Prot
Match: METK3_HORVU (S-adenosylmethionine synthetase 3 OS=Hordeum vulgare GN=SAM3 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.616e-16
Identity = 39/53 (73.58%), Postives = 46/53 (86.79%), Query Frame = -3
Query:  146 ETFLFTSESVNEGYPDKLCDHISDAILDACLEQDPDRKLACETCTKDLVMVVL 304
            ETFLFTSESVNEG+PDKLCD +SDA+LDACL QD D K+ACET TK  +++VL
Sbjct:    4 ETFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDADSKVACETVTKTNMVMVL 56          
BLAST of CN186013 vs. ExPASy Swiss-Prot
Match: METK_OSTTA (S-adenosylmethionine synthetase OS=Ostreococcus tauri GN=METK PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.998e-15
Identity = 40/50 (80.00%), Postives = 44/50 (88.00%), Query Frame = -3
Query:  152 FLFTSESVNEGYPDKLCDHISDAILDACLEQDPDRKLACETCTK-DLVMV 298
            FLFTSESVNEG+PDKL D ISD ILDACLEQDPD K+ACET TK ++VMV
Sbjct:    3 FLFTSESVNEGHPDKLADQISDGILDACLEQDPDSKVACETATKTNMVMV 52          
BLAST of CN186013 vs. ExPASy Swiss-Prot
Match: METK2_YEAST (S-adenosylmethionine synthetase 2 OS=Saccharomyces cerevisiae GN=SAM2 PE=1 SV=3)

HSP 1 Score: 81.2629 bits (199), Expect = 6.820e-15
Identity = 37/54 (68.52%), Postives = 45/54 (83.33%), Query Frame = -3
Query:  149 KMETFLFTSESVNEGYPDKLCDHISDAILDACLEQDPDRKLACETCTKDLVMVV 310
            K +TFLFTSESV EG+PDK+CD +SDAILDACLEQDP  K+ACET  K  +++V
Sbjct:    3 KSKTFLFTSESVGEGHPDKICDQVSDAILDACLEQDPFSKVACETAAKTGMIMV 56          
BLAST of CN186013 vs. ExPASy Swiss-Prot
Match: METK_OSTLU (S-adenosylmethionine synthetase OS=Ostreococcus lucimarinus (strain CCE9901) GN=METK-1 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.984e-14
Identity = 39/50 (78.00%), Postives = 43/50 (86.00%), Query Frame = -3
Query:  152 FLFTSESVNEGYPDKLCDHISDAILDACLEQDPDRKLACETCTK-DLVMV 298
            FLFTSESVNEG+PDKL D ISD ILDACL QDPD K+ACET TK ++VMV
Sbjct:    3 FLFTSESVNEGHPDKLADQISDGILDACLAQDPDSKVACETATKTNMVMV 52          
BLAST of CN186013 vs. ExPASy Swiss-Prot
Match: METK_DICDI (S-adenosylmethionine synthetase OS=Dictyostelium discoideum GN=metK PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.420e-14
Identity = 34/54 (62.96%), Postives = 45/54 (83.33%), Query Frame = -3
Query:  146 METFLFTSESVNEGYPDKLCDHISDAILDACLEQDPDRKLACETCTKDLVMVVL 307
            M ++LFTSESV EG+PDK+CD +SDA+LDACL QDP  K+ACET TK  ++++L
Sbjct:    1 MSSYLFTSESVTEGHPDKICDQVSDAVLDACLAQDPLSKVACETATKTGMVMIL 54          
The following BLAST results are available for this feature:
BLAST of CN186013 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 211
Match NameE-valueIdentityDescription
METK_MESCR4.271e-1779.25S-adenosylmethionine synthetase OS=Mesembryanthemu... [more]
METK3_ORYSJ4.271e-1774.07S-adenosylmethionine synthetase 3 OS=Oryza sativa ... [more]
METK1_TRIMO5.579e-1778.85S-adenosylmethionine synthetase 1 OS=Triticum mono... [more]
METK_CHLRE7.286e-1773.58S-adenosylmethionine synthetase OS=Chlamydomonas r... [more]
METK2_DIACA1.623e-1678.85S-adenosylmethionine synthetase 2 OS=Dianthus cary... [more]
METK3_HORVU3.616e-1673.58S-adenosylmethionine synthetase 3 OS=Hordeum vulga... [more]
METK_OSTTA3.998e-1580.00S-adenosylmethionine synthetase OS=Ostreococcus ta... [more]
METK2_YEAST6.820e-1568.52S-adenosylmethionine synthetase 2 OS=Saccharomyces... [more]
METK_OSTLU1.984e-1478.00S-adenosylmethionine synthetase OS=Ostreococcus lu... [more]
METK_DICDI4.420e-1462.96S-adenosylmethionine synthetase OS=Dictyostelium d... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002D17_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002D17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186013 ID=CN186013; Name=CN186013; organism=Citrus sinensis; type=EST; length=786bp
TTTTTTTTTTTTTTTTGAATTTACACTTCTATTAACTACCAAGTCCCATT
TATACTCTACACACATAATATTAATAAACTATATATGAATAAACAAACAT
AAAATCCTCAAATCAAAAGCAATTCTCGGCCGCAATATACAATAGCAATA
CAACCATAACCAAGTCTTTGGTACAGGTTTCACAAGCCAACTTCCTATCT
GGGTCTTGTTCGAGACAAGCATCGAGAATGGCATCGGAGATATGATCACA
GAGCTTGTCTGGATAACCCTCGTTCACAGATTCTGAAGTGAACAAAAAAG
TCTCCATTTTTTCTTCAAAAACTGTAGACTGCGGCACCAAAGATGACTGC
GTGTGAGGGGCTAACGATGGCGTCACTGTGCTTGAGGGGAGGGGCTGTGC
TAGGAGGCCGTGCACGTGAGGAAGAGAGGGGCTAAGCTGACACGAGGGAG
AGACATGCTCACAAGGAAGAAACTGAGAGGGGCTGAGCTGAAGTTCTGCG
TCGTGTGGAGAGGGAGAAACGCGAGGCTGAGAGGTGAGGGGGAGAGGCGT
GGGAAACAACCGCTTCAAGTTTTAAATTAACAGCATCAAACTAACCCAAC
AAAACTAAAACAAATATTCTCATACTGGGTAAAGTTCCATCAAGTGCAGC
AAAGTAAAAAGCATACAAACAAAAATAAAGGCATTTAGAAAAGAGATGTT
CCCTTTCCCTTCTTGTCTCCACCAATTTCAAAGTGCTTGCACCTCTTGAT
GGGATGTTGAGACACATGCTTGCAACCCTGGCATTG
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