DC900127
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900127 vs. ExPASy Swiss-Prot
Match: FXL14_MOUSE (F-box/LRR-repeat protein 14 OS=Mus musculus GN=Fbxl14 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.943e-12 Identity = 64/220 (29.09%), Postives = 100/220 (45.45%), Query Frame = 1 Query: 7 LDLCQCPAITDRALITIAKNCPKLIDLTIESCSSIGNEGLQAVGRFCPNLKSISIKDCRLVGDQGIASLLSSATYSLEK-VKLQRLNITDVSLAVIGHYGMAVTDLFLTGLPHVSERGFWVMGSGHGLQKLKSLTITSCMGVTDLGLEAVGKGCPNLKQFCLRKCAFLSDNGLISFAKAAFSLESLQLEECHRI--TQLGFFGSLLNCGEKXKALSLVSC 657 L+L C ITD +L IA+ L L + CS+I N GL + LKS++++ CR + D GI L + E + L++L + D +TDL L H+S GL L+ L ++ C G++D GL + +L+ LR C +SD G++ A + L L + C ++ L + L + K+LSL SC Sbjct: 122 LNLSLCKQITDSSLGRIAQYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGCLGLEQLTLQDC---------QKLTDL---SLKHIS----------RGLTGLRLLNLSFCGGISDAGLLHLSH-MGSLRSLNLRSCDNISDTGIMHLAMGSLRLSGLDVSFCDKVGDQSLAYIAQGL---DGLKSLSLCSC 315
BLAST of DC900127 vs. ExPASy Swiss-Prot
Match: FXL14_HUMAN (F-box/LRR-repeat protein 14 OS=Homo sapiens GN=FBXL14 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.943e-12 Identity = 64/220 (29.09%), Postives = 100/220 (45.45%), Query Frame = 1 Query: 7 LDLCQCPAITDRALITIAKNCPKLIDLTIESCSSIGNEGLQAVGRFCPNLKSISIKDCRLVGDQGIASLLSSATYSLEK-VKLQRLNITDVSLAVIGHYGMAVTDLFLTGLPHVSERGFWVMGSGHGLQKLKSLTITSCMGVTDLGLEAVGKGCPNLKQFCLRKCAFLSDNGLISFAKAAFSLESLQLEECHRI--TQLGFFGSLLNCGEKXKALSLVSC 657 L+L C ITD +L IA+ L L + CS+I N GL + LKS++++ CR + D GI L + E + L++L + D +TDL L H+S GL L+ L ++ C G++D GL + +L+ LR C +SD G++ A + L L + C ++ L + L + K+LSL SC Sbjct: 122 LNLSLCKQITDSSLGRIAQYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGCLGLEQLTLQDC---------QKLTDL---SLKHIS----------RGLTGLRLLNLSFCGGISDAGLLHLSH-MGSLRSLNLRSCDNISDTGIMHLAMGSLRLSGLDVSFCDKVGDQSLAYIAQGL---DGLKSLSLCSC 315
BLAST of DC900127 vs. ExPASy Swiss-Prot
Match: FXL14_BOVIN (F-box/LRR-repeat protein 14 OS=Bos taurus GN=FBXL14 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.943e-12 Identity = 64/220 (29.09%), Postives = 100/220 (45.45%), Query Frame = 1 Query: 7 LDLCQCPAITDRALITIAKNCPKLIDLTIESCSSIGNEGLQAVGRFCPNLKSISIKDCRLVGDQGIASLLSSATYSLEK-VKLQRLNITDVSLAVIGHYGMAVTDLFLTGLPHVSERGFWVMGSGHGLQKLKSLTITSCMGVTDLGLEAVGKGCPNLKQFCLRKCAFLSDNGLISFAKAAFSLESLQLEECHRI--TQLGFFGSLLNCGEKXKALSLVSC 657 L+L C ITD +L IA+ L L + CS+I N GL + LKS++++ CR + D GI L + E + L++L + D +TDL L H+S GL L+ L ++ C G++D GL + +L+ LR C +SD G++ A + L L + C ++ L + L + K+LSL SC Sbjct: 122 LNLSLCKQITDSSLGRIAQYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGCLGLEQLTLQDC---------QKLTDL---SLKHIS----------RGLTGLRLLNLSFCGGISDAGLLHLSH-MGSLRSLNLRSCDNISDTGIMHLAMGSLRLSGLDVSFCDKVGDQSLAYIAQGL---DGLKSLSLCSC 315
BLAST of DC900127 vs. ExPASy Swiss-Prot
Match: FXL20_RAT (F-box/LRR-repeat protein 20 OS=Rattus norvegicus GN=Fbxl20 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.329e-12 Identity = 50/160 (31.25%), Postives = 80/160 (50.00%), Query Frame = 1 Query: 1 EKLDLCQCPAITDRALITIAKNCPKLIDLTIESCSSIGNEGLQAVGRFCPNLKSISIKDCRLVGDQGIASLLSSATYSLEKVKLQR-LNITDVSLAVIGHYGMAVTDLFLTGLPHVSERGFWVMGSGHGLQKLKSLTITSCMGVTDLGLEAVGKGCPNLK 477 E L L C TD +++K C KL L + SC+SI N L+A+ CP L+ ++I C V GI +L+ L+ + L+ + D +L IG + + L L +++ G ++ G KL+SL + C +TD L A+G+ CP L+ Sbjct: 120 EVLSLNGCTKTTDATCTSLSKFCSKLRHLDLASCTSITNMSLKALSEGCPLLEQLNISWCDQVTKDGIQALVRGCG-GLKALFLKGCTQLEDEALKYIGAHCPELVTLNLQTCLQITDEG--LITICRGCHKLQSLCASGCSNITDAILNALGQNCPRLR 276 HSP 2 Score: 69.3218 bits (168), Expect = 2.149e-11 Identity = 48/195 (24.62%), Postives = 82/195 (42.05%), Query Frame = 1 Query: 4 KLDLCQCPAITDRALITIAKNCPKLIDLTIESCSSIGNEGLQAVGRFCPNLKSISIKDCRLVGDQGIASLLSSATYSLEKVKLQRLNITDVSLAVIGHYGMAVTDLFLTGLPHVSERGFWVMGSGHGLQKLKSLTITSCMGVTDLGLEAVGKGCPNLKQFCLRKCAFLSDNGLISFAKAAFSLESLQLEECHRIT 588 KL L C + D AL T A+NC + L++ C+ + ++ +FC L+ + + C +IT++SL + + L ++ V++ G + G G LK+L + C + D L+ +G CP L L+ C ++D GLI+ + L+SL C IT Sbjct: 95 KLSLRGCLGVGDNALRTFAQNCRNIEVLSLNGCTKTTDATCTSLSKFCSKLRHLDLASCT--------------------------SITNMSLKALSEGCPLLEQLNISWCDQVTKDGIQALVRGCG--GLKALFLKGCTQLEDEALKYIGAHCPELVTLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNIT 261
BLAST of DC900127 vs. ExPASy Swiss-Prot
Match: AMN1_RAT (Protein AMN1 homolog OS=Rattus norvegicus GN=Amn1 PE=2 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 2.149e-11 Identity = 57/179 (31.84%), Postives = 92/179 (51.40%), Query Frame = 1 Query: 1 EKLDLCQCPAITDRALITIAKNCPKLIDLTIESC----SSIGNEGLQAVGRFCPNLKSISIKDCRLVGDQGIASLLSSATYSLEKVKLQR-LNITDVSLAVIGHY--GMAVTDLFLTGLPHVSERGFWVMGSGHGLQKLKSLTITSCMGVTDLGLEAVGKGCPNLKQFCLRKCAFLSDN 516 ++LDL C I+D AL + K C KL L ++SC +SI +EG++AV C +L IS+K C V D+G+ +L + L+ + L L+ITD SL +G + D T VS+ G + SG ++L+ + + C+ +TD +EA CP + C ++D+ Sbjct: 64 QRLDLRSCN-ISDVALQHLCK-CRKLKALNLKSCREHRNSITSEGIKAVASSCSDLHEISLKGCCSVTDEGVLALALNCQL-LKIIDLGGCLSITDESLHALGKNCPFLQCVDFSTT---QVSDNGVVALVSGPCAKQLEEINMGYCINLTDKAVEAALTACPQICILLFHGCPLITDH 236
BLAST of DC900127 vs. ExPASy Swiss-Prot
Match: FXL13_HUMAN (F-box/LRR-repeat protein 13 OS=Homo sapiens GN=FBXL13 PE=2 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 8.165e-11 Identity = 56/255 (21.96%), Postives = 104/255 (40.78%), Query Frame = 1 Query: 1 EKLDLCQCPAITDRALITIAKNCPKLI-------------------------DLTIESCSSIGNEGLQAV--GRFCPNLKSISIKDCRLVGDQGIASLLSSATYSLEKVKLQRLNITDVSLAVIGHYGMAVTDLFLTGLPHVSERGFWVMGSGHGLQKLKSLTITSCMGVTDLGLEAVGKGCPNLKQFCLRKCAFLSDNGLISFAKAAFSLESLQLEECHRITQLGFFGSLLN-CGEKXKALSLVSCLGIKDQNL 681 ++L++ CP TD ++ I++ CP ++ +L++ C ++GLQ + G C L + + C + QG + +S T + +TD + + +T L TG PH+S+ F + + KL+ + VTD + + K PNL + C ++D+ L S + L L L C RI +G L + + L+L +C+ + D ++ Sbjct: 248 QELNVSDCPTFTDESMRHISEGCPGVLCLNLSNTTITNRTMRLLPRHFHNLQNLSLAYCRRFTDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYIANSCTGIMHLTINDMPTLTDNCVKALVEKCSRITSLVFTGAPHISDCTFRALSA----CKLRKIRFEGNKRVTDASFKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLK-QLTVLNLANCVRIGDMGLKQFLDGPASMRIRELNLSNCVRLSDASV 497 The following BLAST results are available for this feature:
BLAST of DC900127 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DC900127 ID=DC900127; Name=DC900127; organism=Citrus sinensis; type=EST; length=688bpback to top |