CN186010
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN186010 vs. ExPASy Swiss-Prot
Match: HS21C_SOLLC (Small heat shock protein, chloroplastic OS=Solanum lycopersicum GN=HSP21 PE=2 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 8.994e-53 Identity = 102/151 (67.55%), Postives = 119/151 (78.81%), Query Frame = -2 Query: 267 ALDISPFGLMDPSFPTRTMRQMLDTMDRLLEDTMAFPGRSRAGGGGQVRTPWDIKEEENEIKMRFDMPGLXXXXXXXXXXXXVLVIKGEHRAEEAG------GASFSSYDTRLQLPDNCEKDKVKAELKNGVLYISIPKTKVERKVIDVQI 701 ALD+SPFG++DP P RTMRQM+DTMDRL EDTM FPGR+RA G G++RTPWDI ++ENEIKMRFDMPGL +LVIKGEH+ EE G G ++SSYDTRL LPDN KDK+KAELKNGVL+ISIPKT+VE+KVIDVQI Sbjct: 84 ALDVSPFGVLDPMSPMRTMRQMIDTMDRLFEDTMTFPGRNRASGTGEIRTPWDIHDDENEIKMRFDMPGLSKEDVKVSVENDMLVIKGEHKKEEDGRDKHSWGRNYSSYDTRLSLPDNVVKDKIKAELKNGVLFISIPKTEVEKKVIDVQI 234
BLAST of CN186010 vs. ExPASy Swiss-Prot
Match: HS22C_SOYBN (Small heat shock protein, chloroplastic (Fragment) OS=Glycine max GN=HSP22 PE=2 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 6.446e-51 Identity = 100/153 (65.36%), Postives = 121/153 (79.08%), Query Frame = -2 Query: 267 TALDISPFGLMDPSFPTRTMRQMLDTMDRLLEDTMAFPGRSRAGGGGQVRTPWDIKEEENEIKMRFDMPGLXXXXXXXXXXXXVLVIKGEHRAEEAGGA-------SFSSYDTRLQLPDNCEKDKVKAELKNGVLYISIPKTKVERKVIDVQI 704 TA+DISPFG++DP P R+MRQ+LDTMDR+ EDTM FPGR+ GGG++R PWDIK+EE+EI+MRFDMPGL +LVIKG H++E+ G ++SSYDTRL+LPDNCEKDKVKAELKNGVLYI+IPKTKVERKVIDVQ+ Sbjct: 30 TAMDISPFGILDPWSPMRSMRQILDTMDRVFEDTMTFPGRNI--GGGEIRAPWDIKDEEHEIRMRFDMPGLAKEDVKVSVEDDMLVIKGGHKSEQEHGGDDSWSSRTYSSYDTRLKLPDNCEKDKVKAELKNGVLYITIPKTKVERKVIDVQV 180
BLAST of CN186010 vs. ExPASy Swiss-Prot
Match: HS22C_PETHY (Small heat shock protein, chloroplastic OS=Petunia hybrida GN=HSP22 PE=2 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 8.419e-51 Identity = 103/150 (68.67%), Postives = 117/150 (78.00%), Query Frame = -2 Query: 267 ALDISPFGLMDPSFPTRTMRQMLDTMDRLLEDTMAFPGRSRAGGGGQVRTPWDIKEEENEIKMRFDMPGLXXXXXXXXXXXXVLVIKGEHRAEEAG-----GASFSSYDTRLQLPDNCEKDKVKAELKNGVLYISIPKTKVERKVIDVQI 701 ALD+SPFGL+DP P RTMRQM+DTMDRL EDTM FPG SR G G++R PWDIK++ENEIKMRFDMPGL VLVIKGEH+ EE+G G ++SSYDTRL LPDN +KDKVKAELKNGVL ISIPKTKVE+KV DV+I Sbjct: 92 ALDVSPFGLLDPMSPMRTMRQMMDTMDRLFEDTMTFPG-SRNRGTGEIRAPWDIKDDENEIKMRFDMPGLSKEEVKVSVEDDVLVIKGEHKKEESGKDDSWGRNYSSYDTRLSLPDNVDKDKVKAELKNGVLLISIPKTKVEKKVTDVEI 240
BLAST of CN186010 vs. ExPASy Swiss-Prot
Match: HS25P_ARATH (25.3 kDa heat shock protein, chloroplastic OS=Arabidopsis thaliana GN=HSP25.3 PE=2 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 9.308e-50 Identity = 101/149 (67.79%), Postives = 115/149 (77.18%), Query Frame = -2 Query: 267 LDISPFGLMDPSFPTRTMRQMLDTMDRLLEDTMAFPGRSRAGGG-GQVRTPWDIKEEENEIKMRFDMPGLXXXXXXXXXXXXVLVIKGEHRAEEA----GGASFSSYDTRLQLPDNCEKDKVKAELKNGVLYISIPKTKVERKVIDVQI 698 +D+SPFGL+DP P RTMRQMLDTMDR+ EDTM GR+R G G ++R PWDIKEEE+EIKMRFDMPGL VLVIKGE + E++ G S SSY TRLQLPDNCEKDK+KAELKNGVL+I+IPKTKVERKVIDVQI Sbjct: 78 MDVSPFGLLDPLSPMRTMRQMLDTMDRMFEDTMPVSGRNRGGSGVSEIRAPWDIKEEEHEIKMRFDMPGLSKEDVKISVEDNVLVIKGEQKKEDSDDSWSGRSVSSYGTRLQLPDNCEKDKIKAELKNGVLFITIPKTKVERKVIDVQI 226
BLAST of CN186010 vs. ExPASy Swiss-Prot
Match: HS21C_PEA (Small heat shock protein, chloroplastic OS=Pisum sativum GN=HSP21 PE=2 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 2.803e-46 Identity = 93/151 (61.59%), Postives = 115/151 (76.16%), Query Frame = -2 Query: 267 TALDISPFGLMDPSFPTRTMRQMLDTMDRLLEDTMAFPGRSRAGGGGQVRTPWDIKEEENEIKMRFDMPGLXXXXXXXXXXXXVLVIKGEHRAEEAGG-----ASFSSYDTRLQLPDNCEKDKVKAELKNGVLYISIPKTKVERKVIDVQI 704 +++DISPFGL+DP P R+MRQMLDTMDR+ ED + PGR+ GGG++R PW+IK+EE+EI+MRFDMPG+ VLVIK +HR E G S+S YDTRL+LPDNCEK+KVKAELK+GVLYI+IPKTK+ER VIDVQI Sbjct: 83 SSIDISPFGLLDPWSPMRSMRQMLDTMDRIFEDAITIPGRNI--GGGEIRVPWEIKDEEHEIRMRFDMPGVSKEDVKVSVEDDVLVIKSDHREENGGEDCWSRKSYSCYDTRLKLPDNCEKEKVKAELKDGVLYITIPKTKIERTVIDVQI 231
BLAST of CN186010 vs. ExPASy Swiss-Prot
Match: HS26P_ORYSJ (26.7 kDa heat shock protein, chloroplastic OS=Oryza sativa subsp. japonica GN=HSP26.7 PE=2 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 3.001e-40 Identity = 88/160 (55.00%), Postives = 108/160 (67.50%), Query Frame = -2 Query: 267 TALD-ISPFGLMDPSFPTRTMRQMLDTMDRLLEDT-MAFPGRSRAG-GGGQVRTPWDIKEEENEIKMRFDMPGLXXXXXXXXXXXXVLVIKGEHRAEEAGGA-----------SFSSYDTRLQLPDNCEKDKVKAELKNGVLYISIPKTKVERKVIDVQI 704 +ALD ISPFGL+DP P RTMRQMLDTMDR+ +D + FP R G+VR PWD+ E++ E++MRFDMPGL LVI+GEH+ EE GA S SSYD RL LPD C+K KV+AELKNGVL +++PKT+VERKVIDVQ+ Sbjct: 80 SALDGISPFGLVDPMSPMRTMRQMLDTMDRIFDDVALGFPATPRRSLATGEVRMPWDVMEDDKEVRMRFDMPGLSREEVKVMVEDDALVIRGEHKKEEGEGAEGSGDGWWKERSVSSYDMRLALPDECDKSKVRAELKNGVLLVTVPKTEVERKVIDVQV 239
BLAST of CN186010 vs. ExPASy Swiss-Prot
Match: HS21C_WHEAT (Small heat shock protein, chloroplastic OS=Triticum aestivum GN=HSP21 PE=2 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 6.686e-40 Identity = 84/154 (54.55%), Postives = 99/154 (64.29%), Query Frame = -2 Query: 267 DISPFGLMDPSFPTRTMRQMLDTMDRLLEDTMAFPGRSRAGGGGQVRTPWDIKEEENEIKMRFDMPGLXXXXXXXXXXXXVLVIKGEHRAEEAGG-----------ASFSSYDTRLQLPDNCEKDKVKAELKNGVLYISIPKTKVERKVIDVQI 695 DISPFGL+DP P RTMRQMLDTMDRL +D + FP R + R PWDI E+E E+KMRFDMPGL LVI+GEH+ E G S SSYD RL LPD C+K +V+AELKNGVL +S+PK + ERKVIDVQ+ Sbjct: 84 DISPFGLVDPMSPMRTMRQMLDTMDRLFDDAVGFPTRRSPAARARRRMPWDIMEDEKEVKMRFDMPGLSREEVRVMVEDDALVIRGEHKKEAGEGQGEGGDGWWKERSVSSYDMRLALPDECDKSQVRAELKNGVLLVSVPKRETERKVIDVQV 237
BLAST of CN186010 vs. ExPASy Swiss-Prot
Match: HS23M_ARATH (23.6 kDa heat shock protein, mitochondrial OS=Arabidopsis thaliana GN=HSP23.6 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.193e-18 Identity = 52/136 (38.24%), Postives = 78/136 (57.35%), Query Frame = -2 Query: 285 LMDPSFPTRTMRQMLDTMDRLLEDTMAFPGRSRAGGGGQVRTPWDIKEEENEIKMRFDMPGLXXXXXXXXXXXXVLVIKGEHRAEEAGGASFSS----YDTRLQLPDNCEK-DKVKAELKNGVLYISIPKTKVERK 677 + DP PTR++ Q+L+ MD+ +E+ + +R G R WDIKE+++ + +R DMPGL LVI+GE + EE GG S + +R+ LPD K D++KAE+KNGVL + IPK K + + Sbjct: 68 VFDPFSPTRSVSQVLNLMDQFMENPLL--SATRGMGASGARRGWDIKEKDDALYLRIDMPGLSREDVKLALEQDTLVIRGEGKNEEDGGEEGESGNRRFTSRIGLPDKIYKIDEIKAEMKNGVLKVVIPKMKEQER 201
BLAST of CN186010 vs. ExPASy Swiss-Prot
Match: HS235_ARATH (23.5 kDa heat shock protein, mitochondrial OS=Arabidopsis thaliana GN=HSP23.5 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.039e-16 Identity = 49/134 (36.57%), Postives = 77/134 (57.46%), Query Frame = -2 Query: 285 LMDPSFPTRTMRQMLDTMDRLLEDTMAFPGRSRAGGGGQVRTPWDIKEEENEIKMRFDMPGLXXXXXXXXXXXXVLVIKGEHRAEEAGGASFSS--YDTRLQLPDNCEK-DKVKAELKNGVLYISIPKTKVERK 677 ++DP PTR++ QML+ MD++ E + +R G VR W++KE+++ + +R DMPGL LVI+GE EE S + +R++LP+ K D++KAE+KNGVL + IPK K + + Sbjct: 70 ILDPFTPTRSLSQMLNFMDQVSEIPLV--SATRGMGASGVRRGWNVKEKDDALHLRIDMPGLSREDVKLALEQNTLVIRGEGETEEGEDVSGDGRRFTSRIELPEKVYKTDEIKAEMKNGVLKVVIPKIKEDER 201
BLAST of CN186010 vs. ExPASy Swiss-Prot
Match: HS23C_CHERU (Small heat shock protein, chloroplastic OS=Chenopodium rubrum GN=HSP23 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.733e-16 Identity = 47/139 (33.81%), Postives = 75/139 (53.96%), Query Frame = -2 Query: 264 LMDPSFPTRTMRQMLDTMDRLLEDTMAFPGRSRAGGGGQVRTPWDIKEEENEIKMRFDMPGLXXXXXXXXXXXXVLVIKGEHRAEEAGGASFSSYDTRLQLPDNCEK-DKVKAELKNGVLYISIPKTKVERKVIDVQIL 677 + DP TR++ Q+++ MD+L+E+ R G G +R WD++E+E ++++ DMPGL L+IK E E Y +R++L N K D +KAE+KNGVL +++PK K E K Q++ Sbjct: 67 VFDPFRATRSVGQLMNLMDQLMENPFMAASR---GSGRAMRRGWDVREDEEALELKVDMPGLAKEDVKVSVEDNTLIIKSEAEKETEEEEQRRRYSSRIELTPNLYKIDGIKAEMKNGVLKVTVPKIKEEEKKDVFQVM 202 The following BLAST results are available for this feature:
BLAST of CN186010 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186010 ID=CN186010; Name=CN186010; organism=Citrus sinensis; type=EST; length=705bpback to top |