CN186004
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186004 vs. ExPASy Swiss-Prot
Match: SODF_ECO57 (Superoxide dismutase [Fe] OS=Escherichia coli O157:H7 GN=sodB PE=3 SV=2) HSP 1 Score: 130.954 bits (328), Expect = 8.070e-30 Identity = 72/192 (37.50%), Postives = 101/192 (52.60%), Query Frame = 3 Query: 117 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHV-NHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYAS 689 LP LPY AL P IS E ++ H+ KHHQ YVTN N ++ A +++ FN V NH+ +W LAP GGEP + AI FGS + + GSGW WL +++ K +V T+ PL T A PLL +DVWEHAYY+ Y+N +P YL++ W ++NW++ + Sbjct: 5 LPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIKGT--AFEGKSLEEIIRSSEGGVFNNAAQVWNHTFYWNCLAP--NAGGEPT-GKVAEAIAASFGSFADFKAQFTDAAIKNFGSGWTWLVKNSDGKLAIVSTSNAGTPLTTDA---TPLLTVDVWEHAYYIDYRNARPGYLEHFWALVNWEFVA 188
BLAST of CN186004 vs. ExPASy Swiss-Prot
Match: SODM_PALVU (Superoxide dismutase [Mn], mitochondrial (Fragment) OS=Palinurus vulgaris PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 1.054e-29 Identity = 71/147 (48.30%), Postives = 87/147 (59.18%), Query Frame = 3 Query: 159 ISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDV 599 IS IMQ+HH KHHQAY+ N E+L QA D + + L AIKFNGGGH+NH+IFW N+AP GGEP + AI FGS +A K S ++GSGW WLG + +L V T NQDPL L+PLLG+DV Sbjct: 2 ISEMIMQIHHTKHHQAYINNLKACTEKLKQAEQANDVAAMNALLPAIKFNGGGHINHTIFWTNMAP--SAGGEPA-GPVADAITKEFGSFQAFKDKFSTASVGVKGSGWGWLGYCPKNDKLAVATCQNQDPL-QLTHGLIPLLGLDV 144
BLAST of CN186004 vs. ExPASy Swiss-Prot
Match: SODM_BORBU (Superoxide dismutase [Fe] OS=Borrelia burgdorferi GN=sod PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 1.054e-29 Identity = 70/204 (34.31%), Postives = 109/204 (53.43%), Query Frame = 3 Query: 117 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVV--------QLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 704 LP+L YDY A+EP I + M++HH KHH +V N N +E++ + ++ D S ++ + Q I+ N GG+ NH+++++ L P G + I+ FGSL+ L + + GSGW WL L E V+ PL+ + P+LGIDVWEHAYYL+Y+N + +Y+ +NW+ S VY + Sbjct: 4 LPELGYDYDAVEPYIDAKTMEIHHSKHHNGFVMNLNSILEKMGK-IHLTDVSNILKNIHDFPEEFQTLIRNNAGGYSNHTLYFRTLRP---GNKDNLFEKFKDDINAAFGSLDVLKANLKDTAMKIFGSGWAWLVLCPESGLKVISMPNQDSPLMN---SYKPILGIDVWEHAYYLKYQNRRIEYVDAFLKALNWEEVSKVYNE 200
BLAST of CN186004 vs. ExPASy Swiss-Prot
Match: SODF_PSEAE (Superoxide dismutase [Fe] OS=Pseudomonas aeruginosa GN=sodB PE=3 SV=3) HSP 1 Score: 129.413 bits (324), Expect = 2.348e-29 Identity = 71/191 (37.17%), Postives = 100/191 (52.36%), Query Frame = 3 Query: 117 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYAS 689 LP LPY+ +ALEP IS E ++ HH KHH YV N N + + K V G I N NH+ +W L+P GGG+P +L AI+ FGS + ++ + GSGW WL + + T +PL T T PLL DVWEHAYY+ Y+N++P Y++ WN++NW + + Sbjct: 5 LPPLPYEKNALEPHISAETLEYHHDKHHNTYVVNLNNLIPGT-EFEGKSLEEIVKSSSGGIFNNAAQVWNHTFYWNCLSP--NGGGQPT-GALADAINAAFGSFDKFKEEFTKTSVGTFGSGWGWLVKKADGSLALASTIGAGNPL-TSGDT--PLLTCDVWEHAYYIDYRNLRPKYVEAFWNLVNWDFVA 188
BLAST of CN186004 vs. ExPASy Swiss-Prot
Match: SODF_PSEPK (Superoxide dismutase [Fe] OS=Pseudomonas putida (strain KT2440) GN=sodB PE=3 SV=3) HSP 1 Score: 128.642 bits (322), Expect = 4.005e-29 Identity = 71/195 (36.41%), Postives = 101/195 (51.79%), Query Frame = 3 Query: 117 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 701 LP LPY + AL+P IS E ++ HH KHH YV N N V + K V G I N NH+ +W L+P GGG+P +L AI+ FGS + ++ + GSGW WL + + T PL T T PLL DVWEHAYY+ Y+N++P Y++ WN++NW + ++ ++ Sbjct: 5 LPPLPYAHDALQPHISKETLEYHHDKHHNTYVVNLNNLVPGT-EFEGKTLEEIVKSSSGGIFNNAAQVWNHTFYWNCLSP--NGGGQPT-GALADAINAAFGSFDKFKEEFTKTSVGTFGSGWGWLVKKADGSLALASTIGAGCPL-TSGDT--PLLTCDVWEHAYYIDYRNLRPKYVEAFWNLVNWAFVAEQFE 192
BLAST of CN186004 vs. ExPASy Swiss-Prot
Match: SODF_BACFR (Superoxide dismutase [Fe] OS=Bacteroides fragilis GN=sodB PE=3 SV=2) HSP 1 Score: 128.642 bits (322), Expect = 4.005e-29 Identity = 72/199 (36.18%), Postives = 102/199 (51.26%), Query Frame = 3 Query: 108 TVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 704 T +P LPY +ALEP IS + + H+ KH Q YV N N V V+ GAI N G +NH++++ AP + P LG AI FGS E ++ +A L GSGW WL +D + K + + +P+ L PLLG DVWEHAYYL Y+N + D++ +W +++W DV +K Sbjct: 2 TYEMPKLPYANNALEPVISQQTIDYHYGKHLQTYVNNLNSLVPGTEYEGKTVEAIVASAPDGAIFNNAGQVLNHTLYFLQFAP--KPAKNEPAGKLGEAIKRDFGSFENFKKEFNAASVGLFGSGWAWLSVDKDGKLHITKEPNGSNPV---RAGLKPLLGFDVWEHAYYLDYQNRRADHVNKLWEIIDW----DVVEK 191
BLAST of CN186004 vs. ExPASy Swiss-Prot
Match: SODF_RICFE (Superoxide dismutase [Mn/Fe] OS=Rickettsia felis GN=sodB PE=3 SV=2) HSP 1 Score: 128.257 bits (321), Expect = 5.231e-29 Identity = 76/198 (38.38%), Postives = 103/198 (52.02%), Query Frame = 3 Query: 117 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVV----QLQGAIKFNGGGHV-NHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLK-NIWNVMNWKYASD 692 LPDLPYD + +P + E HH KHH AYV N N ++ + L K D ++ Q A FN + NHS FW ++ P +GGG+P L I+ FGS E ++ E GSGW WL RL + TAN + A + PLL DVWEHAYY+ Y+N +PDY+ I +++NWK+ D Sbjct: 16 LPDLPYDKESFKPHFTPETFDYHHGKHHNAYVQNLNNLLKDK-EELQKKDLEEIIEWSSQNSNAAIFNNAAQIWNHSFFWHSIKP--QGGGKPSGKILE-QINKDFGSFEGFCEQFKQEAVGQFGSGWAWLVYHD--NRLQIIKTANAGTPI--ANGMKPLLACDVWEHAYYIDYRNKRPDYVDIFIKHMINWKFVED 205
BLAST of CN186004 vs. ExPASy Swiss-Prot
Match: SODF_PSEPU (Superoxide dismutase [Fe] OS=Pseudomonas putida GN=sodB PE=1 SV=3) HSP 1 Score: 127.487 bits (319), Expect = 8.923e-29 Identity = 71/195 (36.41%), Postives = 100/195 (51.28%), Query Frame = 3 Query: 117 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 701 LP LPY + AL+P IS E ++ HH KHH YV N N V + K V G I N NH+ +W LAP GG+P +L AI+ FGS + ++ + GSGW WL + + T PL T T PLL DVWEHAYY+ Y+N++P Y++ WN++NW + ++ ++ Sbjct: 5 LPPLPYAHDALQPHISKETLEFHHDKHHNTYVVNLNNLVPGT-EFEGKTLEEIVKTSSGGIFNNAAQVWNHTFYWNCLAP--NAGGQPT-GALADAINAAFGSFDKFKEEFTKTSVGTFGSGWGWLVKKADGSLALASTIGAGCPL-TSGDT--PLLTCDVWEHAYYIDYRNLRPKYVEAFWNLVNWAFVAEQFE 192
BLAST of CN186004 vs. ExPASy Swiss-Prot
Match: SODF_PLAVI (Superoxide dismutase [Fe] OS=Plasmodium vivax GN=SODB PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.596e-28 Identity = 70/198 (35.35%), Postives = 105/198 (53.03%), Query Frame = 3 Query: 111 VTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 704 +TLP L Y +AL P IS E + H+ KHH YV N ++ A K V + GAI N NH+ +W ++ P + GGEP H + I FGS ++ S GSGW WL L+ K ++++T +P+ K T +P+L D+WEHAYY+ Y+N + Y+K WN++NW +A++ +K Sbjct: 3 ITLPKLKYALNALSPHISEETLNFHYNKHHAGYVNKLNTLIKDTPFA-EKSLLDIVKESSGAIFNNAAQIWNHTFYWDSMGP--DCGGEP-HGEIKEKIQEDFGSFNNFKEQFSNILCGHFGSGWGWLALNNNNKLVILQTHDAGNPI--KDNTGIPILTCDIWEHAYYIDYRNDRASYVKAWWNLVNWNFANENLKK 194
BLAST of CN186004 vs. ExPASy Swiss-Prot
Match: SODF_PLAFX (Superoxide dismutase [Fe] OS=Plasmodium falciparum (isolate HB3) GN=SODB PE=1 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.596e-28 Identity = 70/198 (35.35%), Postives = 105/198 (53.03%), Query Frame = 3 Query: 111 VTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 704 +TLP L Y +AL P IS E + H+ KHH YV N ++ A K V + GAI N NH+ +W ++ P + GGEP H + I FGS ++ S GSGW WL L+ K ++++T +P+ K T +P+L D+WEHAYY+ Y+N + Y+K WN++NW +A++ +K Sbjct: 3 ITLPKLKYALNALSPHISEETLNFHYNKHHAGYVNKLNTLIKDTPFA-EKSLLDIVKESSGAIFNNAAQIWNHTFYWDSMGP--DCGGEP-HGEIKEKIQEDFGSFNNFKEQFSNILCGHFGSGWGWLALNNNNKLVILQTHDAGNPI--KDNTGIPILTCDIWEHAYYIDYRNDRASYVKAWWNLVNWNFANENLKK 194 The following BLAST results are available for this feature:
BLAST of CN186004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 225
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186004 ID=CN186004; Name=CN186004; organism=Citrus sinensis; type=EST; length=818bpback to top |