DC900123

Overview
NameDC900123
Unique NameDC900123
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length555
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DC900123 vs. ExPASy Swiss-Prot
Match: H32_USTMA (Histone H3.2 OS=Ustilago maydis GN=HHT2 PE=3 SV=3)

HSP 1 Score: 203.371 bits (516), Expect = 6.241e-52
Identity = 105/131 (80.15%), Postives = 109/131 (83.21%), Query Frame = 1 
Query:    1 KQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 393
            KQTARKSTGGKAPRKQLATKAARKSAP+ GGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRF                  LFEDTNL AIHAKRVTI PKDI LARR+RGER
Sbjct:    5 KQTARKSTGGKAPRKQLATKAARKSAPSAGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQESAEAYLVSLFEDTNLAAIHAKRVTIQPKDIALARRLRGER 135
[Close]
BLAST of DC900123 vs. ExPASy Swiss-Prot
Match: H3_PENFN (Histone H3 OS=Penicillium funiculosum GN=HHT1 PE=3 SV=2)

HSP 1 Score: 202.986 bits (515), Expect = 8.152e-52
Identity = 103/132 (78.03%), Postives = 112/132 (84.85%), Query Frame = 1 
Query:    1 KQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 396
            KQTARKSTGGKAPRKQLA+KAARK+AP+TGGVKKPHR++PGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFK+DLRF                  LFEDTNLCAIHAKRVTI  KDIQLARR+RGER+
Sbjct:    5 KQTARKSTGGKAPRKQLASKAARKAAPSTGGVKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRGERS 136
[Close]
BLAST of DC900123 vs. ExPASy Swiss-Prot
Match: H3_NEOFI (Histone H3 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=hht1 PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 8.152e-52
Identity = 103/132 (78.03%), Postives = 112/132 (84.85%), Query Frame = 1 
Query:    1 KQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 396
            KQTARKSTGGKAPRKQLA+KAARK+AP+TGGVKKPHR++PGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFK+DLRF                  LFEDTNLCAIHAKRVTI  KDIQLARR+RGER+
Sbjct:    5 KQTARKSTGGKAPRKQLASKAARKAAPSTGGVKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRGERS 136
[Close]
BLAST of DC900123 vs. ExPASy Swiss-Prot
Match: H3_EMENI (Histone H3 OS=Emericella nidulans GN=hhtA PE=3 SV=2)

HSP 1 Score: 202.986 bits (515), Expect = 8.152e-52
Identity = 103/132 (78.03%), Postives = 112/132 (84.85%), Query Frame = 1 
Query:    1 KQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 396
            KQTARKSTGGKAPRKQLA+KAARK+AP+TGGVKKPHR++PGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFK+DLRF                  LFEDTNLCAIHAKRVTI  KDIQLARR+RGER+
Sbjct:    5 KQTARKSTGGKAPRKQLASKAARKAAPSTGGVKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRGERS 136
[Close]
BLAST of DC900123 vs. ExPASy Swiss-Prot
Match: H3_ASPTN (Histone H3 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=hht1 PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 8.152e-52
Identity = 103/132 (78.03%), Postives = 112/132 (84.85%), Query Frame = 1 
Query:    1 KQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 396
            KQTARKSTGGKAPRKQLA+KAARK+AP+TGGVKKPHR++PGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFK+DLRF                  LFEDTNLCAIHAKRVTI  KDIQLARR+RGER+
Sbjct:    5 KQTARKSTGGKAPRKQLASKAARKAAPSTGGVKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRGERS 136
[Close]
BLAST of DC900123 vs. ExPASy Swiss-Prot
Match: H3_ASPOR (Histone H3 OS=Aspergillus oryzae GN=hhtA PE=3 SV=3)

HSP 1 Score: 202.986 bits (515), Expect = 8.152e-52
Identity = 103/132 (78.03%), Postives = 112/132 (84.85%), Query Frame = 1 
Query:    1 KQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 396
            KQTARKSTGGKAPRKQLA+KAARK+AP+TGGVKKPHR++PGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFK+DLRF                  LFEDTNLCAIHAKRVTI  KDIQLARR+RGER+
Sbjct:    5 KQTARKSTGGKAPRKQLASKAARKAAPSTGGVKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRGERS 136
[Close]
BLAST of DC900123 vs. ExPASy Swiss-Prot
Match: H3_ASPNC (Histone H3 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=hht1 PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 8.152e-52
Identity = 103/132 (78.03%), Postives = 112/132 (84.85%), Query Frame = 1 
Query:    1 KQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 396
            KQTARKSTGGKAPRKQLA+KAARK+AP+TGGVKKPHR++PGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFK+DLRF                  LFEDTNLCAIHAKRVTI  KDIQLARR+RGER+
Sbjct:    5 KQTARKSTGGKAPRKQLASKAARKAAPSTGGVKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRGERS 136
[Close]
BLAST of DC900123 vs. ExPASy Swiss-Prot
Match: H3_ASPFU (Histone H3 OS=Aspergillus fumigatus GN=hhtA PE=3 SV=2)

HSP 1 Score: 202.986 bits (515), Expect = 8.152e-52
Identity = 103/132 (78.03%), Postives = 112/132 (84.85%), Query Frame = 1 
Query:    1 KQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 396
            KQTARKSTGGKAPRKQLA+KAARK+AP+TGGVKKPHR++PGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFK+DLRF                  LFEDTNLCAIHAKRVTI  KDIQLARR+RGER+
Sbjct:    5 KQTARKSTGGKAPRKQLASKAARKAAPSTGGVKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRGERS 136
[Close]
BLAST of DC900123 vs. ExPASy Swiss-Prot
Match: H3_ASPCL (Histone H3 OS=Aspergillus clavatus GN=hht1 PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 8.152e-52
Identity = 103/132 (78.03%), Postives = 112/132 (84.85%), Query Frame = 1 
Query:    1 KQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 396
            KQTARKSTGGKAPRKQLA+KAARK+AP+TGGVKKPHR++PGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFK+DLRF                  LFEDTNLCAIHAKRVTI  KDIQLARR+RGER+
Sbjct:    5 KQTARKSTGGKAPRKQLASKAARKAAPSTGGVKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRGERS 136
[Close]
BLAST of DC900123 vs. ExPASy Swiss-Prot
Match: H33_LODEL (Histone H3.3 OS=Lodderomyces elongisporus GN=HHT3 PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 8.152e-52
Identity = 103/132 (78.03%), Postives = 112/132 (84.85%), Query Frame = 1 
Query:    1 KQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 396
            KQTARKSTGGKAPRKQLA+KAARKSAP +GGVKKPHR++PGTVALREIR++QKSTELLIRKLPFQRLVREIAQDFK+DLRF                 GLFEDTNLCAIHAKRVTI  KDIQLARR+RGER+
Sbjct:    5 KQTARKSTGGKAPRKQLASKAARKSAPVSGGVKKPHRYKPGTVALREIRRFQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQEAVEAYLVGLFEDTNLCAIHAKRVTIQKKDIQLARRLRGERS 136
The following BLAST results are available for this feature:
BLAST of DC900123 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 211
Match NameE-valueIdentityDescription
H32_USTMA6.241e-5280.15Histone H3.2 OS=Ustilago maydis GN=HHT2 PE=3 SV=3[more]
H3_PENFN8.152e-5278.03Histone H3 OS=Penicillium funiculosum GN=HHT1 PE=3... [more]
H3_NEOFI8.152e-5278.03Histone H3 OS=Neosartorya fischeri (strain ATCC 10... [more]
H3_EMENI8.152e-5278.03Histone H3 OS=Emericella nidulans GN=hhtA PE=3 SV=... [more]
H3_ASPTN8.152e-5278.03Histone H3 OS=Aspergillus terreus (strain NIH 2624... [more]
H3_ASPOR8.152e-5278.03Histone H3 OS=Aspergillus oryzae GN=hhtA PE=3 SV=3[more]
H3_ASPNC8.152e-5278.03Histone H3 OS=Aspergillus niger (strain CBS 513.88... [more]
H3_ASPFU8.152e-5278.03Histone H3 OS=Aspergillus fumigatus GN=hhtA PE=3 S... [more]
H3_ASPCL8.152e-5278.03Histone H3 OS=Aspergillus clavatus GN=hht1 PE=3 SV... [more]
H33_LODEL8.152e-5278.03Histone H3.3 OS=Lodderomyces elongisporus GN=HHT3 ... [more]

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Properties
Property NameValue
Genbank descriptionDC900123 VSS Citrus sinensis cDNA clone VS27V40 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900123 ID=DC900123; Name=DC900123; organism=Citrus sinensis; type=EST; length=555bp
AAGCAAACCGCTCGCAAGTCCACCGGAGGCAAGGCCCCAAGAAAGCAACT
GGCGACCAAGGCGGCAAGGAAATCCGCACCGGCAACCGGAGGAGTGAAGA
AGCCTCACAGGTTCCGTCCAGGAACTGTCGCACTCCGTGAAATCAGGAAG
TACCAGAAGAGCACTGAGCTTCTTATTAGGAAGCTTCCGTTCCAGAGATT
GGTGAGGGAAATCGCTCAGGATTTCAAGACGGATCTGAGGTTCCAGAGCA
GCGCTGTTGCTGCACTTCAGGAGGCTGCTGAGGCTTATCTTGTTGGGCTG
TTCGAGGACACCAACCTCTGCGCTATTCATGCTAAGAGGGTCACTATTAT
GCCCAAGGACATTCAGCTTGCTAGGCGGATCAGGGGTGAAAGGGCTTAGG
AACTTTCTGATTTAATGTATTTTGTTCCTCTTACTTCGATGTTAGTCTTT
TGGTCAATATTTGGGGTTTAGATTTATGTTTGGATGTCTATCCGATGGAT
TAGATCGGGTCTAGTATGTATCTAAGGTGTTTGTTAAAATGTTTTCGAGG
GTTTT
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