DC900123
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900123 vs. ExPASy Swiss-Prot
Match: H31_STYLE (Histone H3-1 (Fragment) OS=Stylonychia lemnae GN=H3-1 PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 1.350e-38 Identity = 83/114 (72.81%), Postives = 91/114 (79.82%), Query Frame = 1 Query: 19 STGGKAPRKQLATKAARKSAPA--TGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMP 354 +TG KAPR+QLA KAARK+A +GGVKKPHRFRPGTVALREIRK+QKSTELLIRKLPFQRLVREIAQ++K+DLRF GLFEDTNLCAIHAKRVTIMP Sbjct: 1 NTGAKAPREQLANKAARKTAQVAQSGGVKKPHRFRPGTVALREIRKFQKSTELLIRKLPFQRLVREIAQEYKSDLRFQSQAVLALQEAAEAYMVGLFEDTNLCAIHAKRVTIMP 114
BLAST of DC900123 vs. ExPASy Swiss-Prot
Match: H33_STYLE (Histone H3-3 (Fragment) OS=Stylonychia lemnae GN=H3-3 PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 2.303e-38 Identity = 83/114 (72.81%), Postives = 89/114 (78.07%), Query Frame = 1 Query: 19 STGGKAPRKQLATKAARKS--APATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMP 354 +TGGKAPRK +A K A+KS A ATGGVKKPHRFRPGTVALREIR++QKSTELLIRKLPFQRLVREIA +FK DLRF GLFEDTNLCAIHAKRVTIMP Sbjct: 1 NTGGKAPRKHIAHKQAKKSSAAAATGGVKKPHRFRPGTVALREIRRFQKSTELLIRKLPFQRLVREIASEFKNDLRFQSSAVLALQEASEAYLVGLFEDTNLCAIHAKRVTIMP 114
BLAST of DC900123 vs. ExPASy Swiss-Prot
Match: H35_STYLE (Histone H3-5 (Fragment) OS=Stylonychia lemnae GN=H3-5 PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 3.928e-38 Identity = 83/114 (72.81%), Postives = 89/114 (78.07%), Query Frame = 1 Query: 19 STGGKAPRKQLATKAARKSAP--ATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMP 354 +TG KAPRKQLA KAARKS A GVKKPHRFRPGTVALREIR++QKSTELLIRKLPFQRLVREIAQ++K+DLRF GLFEDTNLCAIHAKRVTIMP Sbjct: 1 NTGAKAPRKQLANKAARKSTNVNAVSGVKKPHRFRPGTVALREIRRFQKSTELLIRKLPFQRLVREIAQEYKSDLRFQSQAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMP 114
BLAST of DC900123 vs. ExPASy Swiss-Prot
Match: H38_STYLE (Histone H3-8 (Fragment) OS=Stylonychia lemnae GN=H3-8 PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.143e-37 Identity = 80/113 (70.80%), Postives = 87/113 (76.99%), Query Frame = 1 Query: 19 STGGKAPRKQLATKAARKSA-PATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMP 354 +TG KAPRK LA KAARK+A PA G+KKPHR+RPGTVALREIRKYQKST+LLIRKLPFQRLVREIA ++K DLRF GLFEDTNLCAIH KRVTIMP Sbjct: 1 NTGAKAPRKHLANKAARKTAAPANAGIKKPHRYRPGTVALREIRKYQKSTDLLIRKLPFQRLVREIASEYKNDLRFQSSAVLALQEAAEAYMIGLFEDTNLCAIHGKRVTIMP 113
BLAST of DC900123 vs. ExPASy Swiss-Prot
Match: H39_STYLE (Histone H3-2 (Fragment) OS=Stylonychia lemnae GN=H3-2 PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 2.546e-37 Identity = 82/114 (71.93%), Postives = 88/114 (77.19%), Query Frame = 1 Query: 19 STGGKAPRKQLATKAARKS--APATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMP 354 +TGGKAPRK +A K A+KS A ATGGVKKPHRFRPGTVALREIR++QKSTELLIRKLPFQRLVREIA +FK DLRF GLFEDTNL AIHAKRVTIMP Sbjct: 1 NTGGKAPRKHIAHKQAKKSSAAAATGGVKKPHRFRPGTVALREIRRFQKSTELLIRKLPFQRLVREIASEFKNDLRFQSSAVLALQEASEAYLVGLFEDTNLAAIHAKRVTIMP 114
BLAST of DC900123 vs. ExPASy Swiss-Prot
Match: H37_STYLE (Histone H3-7 (Fragment) OS=Stylonychia lemnae GN=H3-7 PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 2.546e-37 Identity = 82/114 (71.93%), Postives = 88/114 (77.19%), Query Frame = 1 Query: 19 STGGKAPRKQLATKAARKS--APATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMP 354 +TGGKAPRK +A K A+KS A ATGGVKKPHRFRPGTVALREIR++QKSTELLIRKLPFQRLVREIA +FK DLRF GLFEDTNL AIHAKRVTIMP Sbjct: 1 NTGGKAPRKHIAHKQAKKSSAAAATGGVKKPHRFRPGTVALREIRRFQKSTELLIRKLPFQRLVREIASEFKNDLRFQSSAVLALQEASEAYLVGLFEDTNLAAIHAKRVTIMP 114
BLAST of DC900123 vs. ExPASy Swiss-Prot
Match: H3_GUITH (Histone H3 OS=Guillardia theta PE=3 SV=3) HSP 1 Score: 154.066 bits (388), Expect = 4.342e-37 Identity = 82/130 (63.08%), Postives = 93/130 (71.54%), Query Frame = 1 Query: 1 KQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 390 KQTARK+ GG +++ K A+ +KK HR++PGTVALREIRKYQKST LLIRKLPFQRLVRE+AQD+K+DLRF LFEDTNLCAIHAKRVTIMPKDI LARRIRGE Sbjct: 5 KQTARKTVGGDI-NSRISEKRAKSDNSKNIDLKKVHRYKPGTVALREIRKYQKSTNLLIRKLPFQRLVRELAQDYKSDLRFQNSAVLALQEASESYLVNLFEDTNLCAIHAKRVTIMPKDIYLARRIRGE 133
BLAST of DC900123 vs. ExPASy Swiss-Prot
Match: H3L4_ARATH (Histone H3-like 4 OS=Arabidopsis thaliana GN=At5g12910 PE=2 SV=3) HSP 1 Score: 152.91 bits (385), Expect = 9.674e-37 Identity = 80/130 (61.54%), Postives = 96/130 (73.85%), Query Frame = 1 Query: 4 QTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 393 QTARK+TGGKAP A + + S P +KKP+R++PGTVALREIRKYQK+T+L+IRKLPFQRLV+EIAQ K DLRF G+FEDTNLCA+HAKR TIMPKDIQLA+R+RG+R Sbjct: 6 QTARKATGGKAPH--FAMRVWQHSTPP---LKKPYRYKPGTVALREIRKYQKTTDLVIRKLPFQRLVKEIAQSLKADLRFQTGAVSALQEAAEAFMVGMFEDTNLCAMHAKRSTIMPKDIQLAKRLRGDR 130
BLAST of DC900123 vs. ExPASy Swiss-Prot
Match: H33L1_CAEEL (Histone H3.3-like type 1 OS=Caenorhabditis elegans GN=his-70 PE=2 SV=3) HSP 1 Score: 152.14 bits (383), Expect = 1.650e-36 Identity = 81/123 (65.85%), Postives = 91/123 (73.98%), Query Frame = 1 Query: 1 KQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQL 369 K TARKS GGKAPRK LATKAARK P G VKK R+RP + AL+EIRKYQKSTELL+RKLPFQRLVRE+AQ+ ++RF GLFEDTNLCAIHAKRVTIMPKD+Q+ Sbjct: 5 KHTARKSFGGKAPRKSLATKAARKVFPVDGQVKK--RYRPSSNALKEIRKYQKSTELLVRKLPFQRLVREVAQEIMPNVRFQSAAIQALHEAAEAYLIGLFEDTNLCAIHAKRVTIMPKDMQV 125
BLAST of DC900123 vs. ExPASy Swiss-Prot
Match: H31_ENCCU (Histone H3.1 OS=Encephalitozoon cuniculi GN=HHT1 PE=3 SV=3) HSP 1 Score: 136.732 bits (343), Expect = 7.174e-32 Identity = 72/140 (51.43%), Postives = 92/140 (65.71%), Query Frame = 1 Query: 1 KQTARKSTGGKAPRKQLATKAARKS-APATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFK--TDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA*ELSD 411 KQ+ARK+TGGKAPRKQL+ K+ARK +PA+ K R+RPG+VAL+EIR+YQKST+ LIR+LPFQR R + ++ TD+RF GLFED LCA HAKRVT+ PKDI L ++R +SD Sbjct: 5 KQSARKTTGGKAPRKQLSAKSARKGVSPASSAGAKKSRYRPGSVALKEIRRYQKSTDFLIRRLPFQRACRSVVKECSNATDIRFQGPALASIQEALEVYLVGLFEDAMLCAYHAKRVTVFPKDISLVLKLRSRHVKSISD 144 The following BLAST results are available for this feature:
BLAST of DC900123 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 211
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900123 ID=DC900123; Name=DC900123; organism=Citrus sinensis; type=EST; length=555bpback to top |