DC900123
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900123 vs. ExPASy Swiss-Prot
Match: H3L_BOVIN (Histone H3-like OS=Bos taurus PE=2 SV=3) HSP 1 Score: 132.109 bits (331), Expect = 1.767e-30 Identity = 65/81 (80.25%), Postives = 71/81 (87.65%), Query Frame = 1 Query: 1 KQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRF 243 K+TA KSTGGK PRKQL +AA KSAP+T G+ KPHR+RPGTVALREIR YQKST LIRKLPFQRLVREIAQDFKTDL+F Sbjct: 5 KRTAYKSTGGKVPRKQLVIEAAGKSAPSTSGMTKPHRYRPGTVALREIRPYQKSTHFLIRKLPFQRLVREIAQDFKTDLKF 85
BLAST of DC900123 vs. ExPASy Swiss-Prot
Match: H3L3_LILLO (Histone H3-like 3 OS=Lilium longiflorum GN=leH3 PE=2 SV=3) HSP 1 Score: 125.946 bits (315), Expect = 1.266e-28 Identity = 76/152 (50.00%), Postives = 86/152 (56.58%), Query Frame = 1 Query: 1 KQTARKSTGGKAPRKQLATKAARKSAPAT-----------------------GGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 387 K AR STGGKAPRKQLA KA RK+AP T GVK+PHR+RPG + LREIRKY+K+ I KLPF RLVR+I Q+ K LRF LFED AIHAKRVT++PKDIQLAR I G Sbjct: 5 KLNARMSTGGKAPRKQLAYKAVRKAAPPTIGVKLPNSYRPGDQTVCKPAPPTDGVKEPHRYRPGKMGLREIRKYKKNARFFISKLPFHRLVRKITQNLKAHLRFQSTAMPAPEEVSEAYLVKLFED----AIHAKRVTLVPKDIQLARCIGG 152
BLAST of DC900123 vs. ExPASy Swiss-Prot
Match: H3_ENTHI (Histone H3 OS=Entamoeba histolytica GN=H3 PE=3 SV=2) HSP 1 Score: 123.635 bits (309), Expect = 6.285e-28 Identity = 70/117 (59.83%), Postives = 78/117 (66.67%), Query Frame = 1 Query: 43 KQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 393 K +A KAA+K KK R PG VAL EI+ Q+STELL+RK PFQ LVREIAQ K+DLRF GLFEDTNLCAIHAKR+TIMPKD+QLARRIRGER Sbjct: 20 KNVAFKAAKKMLSKDSTKKK--RAHPGAVALTEIKVLQRSTELLLRKAPFQALVREIAQVSKSDLRFQSAAISALQEAAEAYLVGLFEDTNLCAIHAKRITIMPKDMQLARRIRGER 134
BLAST of DC900123 vs. ExPASy Swiss-Prot
Match: H33_HORVU (Histone H3.3 (Fragment) OS=Hordeum vulgare PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.185e-26 Identity = 63/80 (78.75%), Postives = 63/80 (78.75%), Query Frame = 1 Query: 157 KSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 396 KSTELLIRKLPFQRLVREIAQDFKTDLRF GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA Sbjct: 1 KSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 80
BLAST of DC900123 vs. ExPASy Swiss-Prot
Match: CENPA_CANAL (Histone H3-like centromeric protein CSE4 OS=Candida albicans GN=CSE4 PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 2.471e-24 Identity = 69/122 (56.56%), Postives = 79/122 (64.75%), Query Frame = 1 Query: 37 PRKQLATKA-ARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDF---KTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 390 PR+ T+ ++ P VKK R+RPGT ALREIR+YQKST+LLIRKLPF RLVREI+ DF LR+ L EDTNLCAIHAKRVTIM KDIQLARRIRG+ Sbjct: 91 PRRTTTTRPEVNRTVPR---VKK--RYRPGTKALREIRQYQKSTDLLIRKLPFARLVREISLDFVGPSYGLRWQSNAILALQEASESFLIHLLEDTNLCAIHAKRVTIMQKDIQLARRIRGQ 207
BLAST of DC900123 vs. ExPASy Swiss-Prot
Match: CENPA_DANRE (Histone H3-like centromeric protein A OS=Danio rerio GN=cenpa PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 3.228e-24 Identity = 59/112 (52.68%), Postives = 71/112 (63.39%), Query Frame = 1 Query: 55 TKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTD-LRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 387 ++ R S P+ +K H+FRPGT AL EIRKYQKST LL+RK PF RLVRE+ Q F + + + LF D NLCAIHAKRVT+ P+DIQLARRIRG Sbjct: 30 SRTRRHSGPSGSSPRKKHKFRPGTRALMEIRKYQKSTGLLLRKAPFSRLVREVCQMFSREHMMWQGYALMALQEAAEAFMVRLFSDANLCAIHAKRVTLFPRDIQLARRIRG 141
BLAST of DC900123 vs. ExPASy Swiss-Prot
Match: CENPA_NEUCR (Histone H3-like centromeric protein cse-4 OS=Neurospora crassa GN=cse-4 PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 5.506e-24 Identity = 61/119 (51.26%), Postives = 77/119 (64.71%), Query Frame = 1 Query: 40 RKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFK---TDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 387 R++ + + P G K+ R+RPGT+AL+EIR YQ++T+LL+ KLPF RLVREIA F+ ++R+ LFEDTNLCAIHAKRVTIM KDIQLARRIRG Sbjct: 31 RRKSRASSVQPGDPVPQGKKR--RYRPGTLALKEIRNYQRTTDLLVAKLPFARLVREIAMQFRPMDEEMRWQSQAILALQEAAEAFLVHLFEDTNLCAIHAKRVTIMQKDIQLARRIRG 147
BLAST of DC900123 vs. ExPASy Swiss-Prot
Match: CENPA_SCHPO (Histone H3-like centromeric protein cnp1 OS=Schizosaccharomyces pombe GN=cnp1 PE=1 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 1.602e-23 Identity = 65/118 (55.08%), Postives = 77/118 (65.25%), Query Frame = 1 Query: 64 ARKSAPATGGVKKPH----RFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQD----FKTD--LRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 387 A+KS A G P R+RPGT ALREIRKYQ+ST+LLI++LPF R+VREI+ + F TD LR+ LFEDTNLCAIHAKRVTIM +D+QLARRIRG Sbjct: 2 AKKSLMAEPGDPIPRPRKKRYRPGTTALREIRKYQRSTDLLIQRLPFSRIVREISSEFVANFSTDVGLRWQSTALQCLQEAAEAFLVHLFEDTNLCAIHAKRVTIMQRDMQLARRIRG 119
BLAST of DC900123 vs. ExPASy Swiss-Prot
Match: H3_LEIIN (Histone H3 OS=Leishmania infantum PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.092e-23 Identity = 64/132 (48.48%), Postives = 80/132 (60.61%), Query Frame = 1 Query: 1 KQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR-FRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 393 K+TAR ++ + +K ++K+ GVK+ HR +RPGT A+REIRK+QKST LLI+ PFQRLVR + + K LRF L DTNL IHAKRVTI PKDIQLA R+RGER Sbjct: 5 KETARA-------KRTITSKKSKKAPSGASGVKRSHRRWRPGTCAIREIRKFQKSTSLLIQCAPFQRLVRGVERQ-KEGLRFQSSAIMALQEATEAYIVSLMADTNLACIHAKRVTIQPKDIQLALRLRGER 128
BLAST of DC900123 vs. ExPASy Swiss-Prot
Match: H3L_ENCCU (Histone H3-like protein OS=Encephalitozoon cuniculi GN=ECU09_0450 PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.356e-22 Identity = 59/128 (46.09%), Postives = 79/128 (61.72%), Query Frame = 1 Query: 1 KQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIR 384 KQTA K+ GGKAPRK ++ K+ S + + K RF+ G +AL+EIRKYQKST+LLIRK PFQR+VR++ + + +RF L ED C +HAKRVT+MPKDI L +I+ Sbjct: 5 KQTASKALGGKAPRKGISAKSIPSSG-CSPAMPKRTRFKAGALALKEIRKYQKSTDLLIRKRPFQRMVRDLCKG-REGVRFQASAIVAFQEAVENFLTSLMEDAYRCVLHAKRVTLMPKDICLVYKIK 130 The following BLAST results are available for this feature:
BLAST of DC900123 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 211
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900123 ID=DC900123; Name=DC900123; organism=Citrus sinensis; type=EST; length=555bpback to top |