DC900123
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900123 vs. ExPASy Swiss-Prot
Match: CENPA_PICFA (Histone H3-like centromeric protein CSE4 OS=Pichia farinosa GN=CSE4 PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.356e-22 Identity = 57/96 (59.38%), Postives = 68/96 (70.83%), Query Frame = 1 Query: 109 RFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDF---KTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 387 R+RPGT ALREIR+YQ+S+ELLIRKLPF RLV+E+A+++ +R+ L EDTNLCAIHAKRVTIM KDIQLARRIRG Sbjct: 61 RYRPGTKALREIRRYQRSSELLIRKLPFARLVKEVAENYIGADYGIRWQSNAVLALQEACEAFLVHLLEDTNLCAIHAKRVTIMQKDIQLARRIRG 156
BLAST of DC900123 vs. ExPASy Swiss-Prot
Match: CENPA_ASHGO (Histone H3-like centromeric protein CSE4 OS=Ashbya gossypii GN=CSE4 PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 1.958e-21 Identity = 53/101 (52.48%), Postives = 67/101 (66.34%), Query Frame = 1 Query: 97 KKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKT---DLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 390 KKP R+RP VAL+EIR+YQ+STELLI ++PF RLV+E+ F T +R+ GL E TNL A+HAKRVT+M KD+QLARRIRG+ Sbjct: 102 KKPQRYRPSDVALQEIRRYQRSTELLISRMPFARLVKEVTDQFTTVDQQMRWQSMAILALQEASEAYIVGLLEHTNLLALHAKRVTVMRKDMQLARRIRGQ 202
BLAST of DC900123 vs. ExPASy Swiss-Prot
Match: CENPA_YARLI (Histone H3-like centromeric protein CSE4 OS=Yarrowia lipolytica GN=CSE4 PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.269e-20 Identity = 59/125 (47.20%), Postives = 74/125 (59.20%), Query Frame = 1 Query: 25 GGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKT----DLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 387 GG P Q + T + KP R++PG AL+EIR+YQ+ TELLI KLPF R+VRE+A ++ +L++ LFED NLCAIHAKRVTIM KD+QLARRIRG Sbjct: 21 GGLHPLGQTRKTLPGERRDTTQKITKP-RYKPGQKALKEIRRYQRGTELLIAKLPFARVVREVALNYLGSEYGNLQWQSMALLALQEAAEAFLVHLFEDVNLCAIHAKRVTIMQKDMQLARRIRG 144
BLAST of DC900123 vs. ExPASy Swiss-Prot
Match: CENPA_XENTR (Histone H3-like centromeric protein A OS=Xenopus tropicalis GN=cenpa PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 6.300e-20 Identity = 61/130 (46.92%), Postives = 74/130 (56.92%), Query Frame = 1 Query: 7 TARKSTGG-KAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRF--XXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 387 T+ +S G AP ++ A +A K RFRPGT AL EIRKYQKSTELLIRK PF RLVRE+ + L + LFED+ LC++HAKRVT+ +DIQLARRIRG Sbjct: 26 TSTRSPGRPSAPEQRKAPRATPKK-----------RFRPGTRALMEIRKYQKSTELLIRKAPFSRLVREVCMTYACGLNYSWQSMALMALQEASEAFLVRLFEDSYLCSLHAKRVTLYVQDIQLARRIRG 144
BLAST of DC900123 vs. ExPASy Swiss-Prot
Match: CENPA_XENLA (Histone H3-like centromeric protein A OS=Xenopus laevis GN=cenpa PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 6.300e-20 Identity = 60/124 (48.39%), Postives = 72/124 (58.06%), Query Frame = 1 Query: 22 TGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRF--XXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 387 T + P Q +A+R S KK RFRPGT AL EIRKYQKSTELLIRK PF RLVRE+ + + + LFED+ LC++HAKRVT+ +DIQLARRIRG Sbjct: 29 TSPRRPHAQQQRRASRASP------KK--RFRPGTRALMEIRKYQKSTELLIRKAPFSRLVREVCMTYACGMNYNWQSMALMALQEASEAFLVRLFEDSYLCSLHAKRVTLYVQDIQLARRIRG 144
BLAST of DC900123 vs. ExPASy Swiss-Prot
Match: CENPA_YEAST (Histone H3-like centromeric protein CSE4 OS=Saccharomyces cerevisiae GN=CSE4 PE=1 SV=2) HSP 1 Score: 95.1301 bits (235), Expect = 2.394e-19 Identity = 50/97 (51.55%), Postives = 64/97 (65.98%), Query Frame = 1 Query: 109 RFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKT---DLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 390 ++ P +AL EIRKYQ+ST+LLI K+PF RLV+E+ +F T DLR+ GL E TNL A+HAKR+TIM KD+QLARRIRG+ Sbjct: 131 KYTPSELALYEIRKYQRSTDLLISKIPFARLVKEVTDEFTTKDQDLRWQSMAIMALQEASEAYLVGLLEHTNLLALHAKRITIMKKDMQLARRIRGQ 227
BLAST of DC900123 vs. ExPASy Swiss-Prot
Match: CENPA_KLULA (Histone H3-like centromeric protein CSE4 OS=Kluyveromyces lactis GN=CSE4 PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 9.097e-19 Identity = 49/97 (50.52%), Postives = 64/97 (65.98%), Query Frame = 1 Query: 109 RFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTD---LRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 390 R++P +AL EIRKYQ+ST+LLI ++PF RLV+E+ F T+ LR+ GL E TNL A+HAKR+TIM KD+QLARRIRG+ Sbjct: 86 RYKPTDLALAEIRKYQRSTDLLISRMPFARLVKEVTDQFTTESEPLRWQSMAIMALQEASEAYLVGLLEHTNLLALHAKRITIMRKDMQLARRIRGQ 182
BLAST of DC900123 vs. ExPASy Swiss-Prot
Match: CENPA_KLUMA (Histone H3-like centromeric protein CSE4 OS=Kluyveromyces marxianus GN=CSE4 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.188e-18 Identity = 48/97 (49.48%), Postives = 64/97 (65.98%), Query Frame = 1 Query: 109 RFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTD---LRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 390 +++P +AL EIRKYQ+ST+LLI ++PF RLV+E+ F +D LR+ GL E TNL A+HAKR+TIM KD+QLARRIRG+ Sbjct: 94 KYKPSDLALAEIRKYQRSTDLLISRMPFARLVKEVTDQFASDEEPLRWQSMAIMALQEASEAYLVGLLEHTNLLALHAKRITIMRKDMQLARRIRGQ 190
BLAST of DC900123 vs. ExPASy Swiss-Prot
Match: CENPA_CANGA (Histone H3-like centromeric protein CSE4 OS=Candida glabrata GN=CSE4 PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.026e-18 Identity = 48/101 (47.52%), Postives = 64/101 (63.37%), Query Frame = 1 Query: 97 KKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDF---KTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 390 K+ F P +A+ EI KYQ+ST LLI+K+PF +LV+E+ ++F DLR+ GL E TNL A+HAKR+TIM KD+QLARRIRG+ Sbjct: 138 KEKRNFAPSKLAMYEIEKYQRSTALLIQKIPFAKLVKEVTEEFAGESQDLRWQSMAILALQEASEAYLVGLLEHTNLLALHAKRITIMKKDMQLARRIRGQ 238
BLAST of DC900123 vs. ExPASy Swiss-Prot
Match: CENPA_TETTH (Histone H3-like centromeric protein CNA1 OS=Tetrahymena thermophila GN=CNA1 PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 7.701e-18 Identity = 52/123 (42.28%), Postives = 72/123 (58.54%), Query Frame = 1 Query: 40 RKQLATKAARKSAPA---TGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDF--KTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 393 R + +TK R+S+ + K RFRPG AL+++R+Y ++ LLIRKLPFQRL+REI+ + LR+ FED N CA+HAKRVT+M KD+ LA RIRG++ Sbjct: 54 RNKASTKKKRESSGEKYESARDKVIRRFRPGDNALKQLRQYNQTPSLLIRKLPFQRLIREISTRMTEEDSLRWTSFALVLLQTVVEDYMVSFFEDANACALHAKRVTLMSKDLALAARIRGQK 176 The following BLAST results are available for this feature:
BLAST of DC900123 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 211
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900123 ID=DC900123; Name=DC900123; organism=Citrus sinensis; type=EST; length=555bpback to top |