DC900123
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900123 vs. ExPASy Swiss-Prot
Match: HCP3L_CAEEL (Histone H3-like centromeric protein cpar-1 OS=Caenorhabditis elegans GN=cpar-1 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.503e-13 Identity = 42/99 (42.42%), Postives = 56/99 (56.57%), Query Frame = 1 Query: 94 VKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQ---DFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRI 381 + K R+RPG AL EIRKYQ+S +LLI K PF RLVREI Q F +DLR +F+ ++L + H+KR T+ D+QL RR+ Sbjct: 158 ISKTRRYRPGQKALEEIRKYQESEDLLIPKAPFARLVREIMQTSTPFSSDLRIRSDAINALQEASEALLVQMFDGSSLISAHSKRATLTTTDVQLYRRL 256
BLAST of DC900123 vs. ExPASy Swiss-Prot
Match: H32_TETTR (Histone H3.2 (Fragment) OS=Tetrahymena tropicalis PE=3 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 1.662e-12 Identity = 34/37 (91.89%), Postives = 36/37 (97.30%), Query Frame = 1 Query: 1 KQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR 111 KQTARKSTG KAPRKQLA+KAARKSAPATGG+KKPHR Sbjct: 5 KQTARKSTGAKAPRKQLASKAARKSAPATGGIKKPHR 41
BLAST of DC900123 vs. ExPASy Swiss-Prot
Match: H32_TETSO (Histone H3.2 (Fragment) OS=Tetrahymena sonneborni PE=3 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 1.662e-12 Identity = 34/37 (91.89%), Postives = 36/37 (97.30%), Query Frame = 1 Query: 1 KQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR 111 KQTARKSTG KAPRKQLA+KAARKSAPATGG+KKPHR Sbjct: 5 KQTARKSTGAKAPRKQLASKAARKSAPATGGIKKPHR 41
BLAST of DC900123 vs. ExPASy Swiss-Prot
Match: H32_TETRO (Histone H3.2 (Fragment) OS=Tetrahymena rostrata PE=3 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 1.662e-12 Identity = 34/37 (91.89%), Postives = 36/37 (97.30%), Query Frame = 1 Query: 1 KQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR 111 KQTARKSTG KAPRKQLA+KAARKSAPATGG+KKPHR Sbjct: 5 KQTARKSTGAKAPRKQLASKAARKSAPATGGIKKPHR 41
BLAST of DC900123 vs. ExPASy Swiss-Prot
Match: H32_TETPR (Histone H3.2 (Fragment) OS=Tetrahymena paravorax PE=3 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 1.662e-12 Identity = 34/37 (91.89%), Postives = 36/37 (97.30%), Query Frame = 1 Query: 1 KQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR 111 KQTARKSTG KAPRKQLA+KAARKSAPATGG+KKPHR Sbjct: 5 KQTARKSTGAKAPRKQLASKAARKSAPATGGIKKPHR 41
BLAST of DC900123 vs. ExPASy Swiss-Prot
Match: H32_TETPI (Histone H3.2 (Fragment) OS=Tetrahymena pigmentosa PE=3 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 1.662e-12 Identity = 34/37 (91.89%), Postives = 36/37 (97.30%), Query Frame = 1 Query: 1 KQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR 111 KQTARKSTG KAPRKQLA+KAARKSAPATGG+KKPHR Sbjct: 5 KQTARKSTGAKAPRKQLASKAARKSAPATGGIKKPHR 41
BLAST of DC900123 vs. ExPASy Swiss-Prot
Match: H32_TETPA (Histone H3.2 (Fragment) OS=Tetrahymena patula PE=3 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 1.662e-12 Identity = 34/37 (91.89%), Postives = 36/37 (97.30%), Query Frame = 1 Query: 1 KQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR 111 KQTARKSTG KAPRKQLA+KAARKSAPATGG+KKPHR Sbjct: 5 KQTARKSTGAKAPRKQLASKAARKSAPATGGIKKPHR 41
BLAST of DC900123 vs. ExPASy Swiss-Prot
Match: H32_TETNI (Histone H3.2 (Fragment) OS=Tetrahymena nippisingi PE=3 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 1.662e-12 Identity = 34/37 (91.89%), Postives = 36/37 (97.30%), Query Frame = 1 Query: 1 KQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR 111 KQTARKSTG KAPRKQLA+KAARKSAPATGG+KKPHR Sbjct: 5 KQTARKSTGAKAPRKQLASKAARKSAPATGGIKKPHR 41
BLAST of DC900123 vs. ExPASy Swiss-Prot
Match: H32_TETNA (Histone H3.2 (Fragment) OS=Tetrahymena nanneyi PE=3 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 1.662e-12 Identity = 34/37 (91.89%), Postives = 36/37 (97.30%), Query Frame = 1 Query: 1 KQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR 111 KQTARKSTG KAPRKQLA+KAARKSAPATGG+KKPHR Sbjct: 5 KQTARKSTGAKAPRKQLASKAARKSAPATGGIKKPHR 41
BLAST of DC900123 vs. ExPASy Swiss-Prot
Match: H32_TETMI (Histone H3.2 (Fragment) OS=Tetrahymena mimbres PE=3 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 1.662e-12 Identity = 34/37 (91.89%), Postives = 36/37 (97.30%), Query Frame = 1 Query: 1 KQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR 111 KQTARKSTG KAPRKQLA+KAARKSAPATGG+KKPHR Sbjct: 5 KQTARKSTGAKAPRKQLASKAARKSAPATGGIKKPHR 41 The following BLAST results are available for this feature:
BLAST of DC900123 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 211
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900123 ID=DC900123; Name=DC900123; organism=Citrus sinensis; type=EST; length=555bpback to top |